| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916832
Identifier: 229916832
GI number: 229916832
Start: 1077565
End: 1079163
Strand: Reverse
Name: 229916832
Synonym: EAT1b_1105
Alternate gene names: NA
Gene position: 1079163-1077565 (Counterclockwise)
Preceding gene: 229916833
Following gene: 229916831
Centisome position: 35.97
GC content: 39.71
Gene sequence:
>1599_bases GTGAATGTTAAGAAAATTGTTTTGAACAATAACTTAACTGCAAACTTTAATGCGACACGTAAAGTTGATTTCGATCTTAA TGGAAAAACATTAACTGGTAACGTTTCGTATGATACAGATGCAGAAGGAACAATTCTTCTTTCGAACGGTACAGTAACGG GTAATCTTACGGTAGATACGCCAAATGTGAGCTTTACCAACTCAGCAACTGTAAACGGTACAACTACAATTACTGATGTA GCAAACAACACGTTTACAAACAACGGTCTCCTCAACATCGTTATTATTCAGGATGCAACAGGAACGCCACGTTTCATCAA CGGTCAAAACAGCCAGATTCAAAACCTTGTGATTGACACTATGCAACCTGTGAACCTCCAAGGTGGATTCACAAAAGTGA CTGTGAAACAAGATACACAACTGAACTTGGCTAACGGTTCAGTCATCAATGATTTGAACACGGATGCAAACGTTCAAGCG ACAGTTTCTGGTGGTACTGTAAAGGATACTTCTGGTAATGGTGAGGTCGTCATCGACGATGAGGAAGTGGTATATCCACA AGTTCAAATCAAAGGGTACGTCACATACCGTGTATCCAAAGTTGATAAAAACTTCTATGGTGTACAGGCTCGTATCGTCT TACCAGCTGACCAACACGTTTCTCTTCAAGAAGGAGATCGCGTCGTCGTTTCTTTAATGAATGGCGATAAAGTACTAGCA ACAAGTACAACAAAAGAAGAAGTTAAAGATTTGGTGAAGGATGTTTTCAAAAACGAGTTTGCCAATGAAAAACATTACGC ATCGACATTATTTGTGCCAAATGGTTCTTATCCATCAGGTACATGGGATACGACGGCTTGGGATGCTTCATACGATGTAA AACCAAATCGTTTGAAAGTTGAAATCAAACGTGACGGTAAAGTCATCTCGTCAACGGTTTCTACTGTTGCTTTAGATGAG GCATTTACTGACGGTTCAAGTAAAGTTGCTCTTTCATGGGAGCAAATTTTGAAAGAAAATGAGCCGGCTGTCAACGATGC GATGTTGAAGATTAATACTGAGAAGGATCCTGCTAAACTAAAAGCGGTCGTTGAATCAGAGGCATTAGACCTTGGGTTAA ACTTGGAGGGTTACAATGCTCTTTCTGATTCAGAAGGATTAGGTGATTACGGTCAAGGTGATCGTCAAATTGCAGTCATT ACTGATATCTTGGCTAACCGCGCTGATGTAAAGGTTGAAACTTGGACACTTGAACAATTCAAAAAGTTGTTCAATGCCGC AGTTGAAAACCGTACAGCGACACAAGATGCTTTATTCTCTGTGAATAGTGCAAAAGAAGCAAAAGATCTCAAAATTGAAG ACTTCATTGGTAAAGTTGCAGTTGCCTATGCAAAAAACCAAGAAGTTCTTCCGAAAGTCAGTGAAAACTATGTTTCATCT ACAGTGGTAACTGATTTGAATAATGCGATTAACGCTTTTAATGCAATTCAAGATGACGAAACAAAGGCAGCGATTTTGGT AGAAGTATTTAACGAAGGTAAAAACTATACATCGTGGGGCCAAATGGCGCAAGCTTTCTTTGGGGCGATGCAATCGTAA
Upstream 100 bases:
>100_bases TAGGCCCGAACCGAAAGCTGAGTCTTTAGACTTAGTATAAGACGGGAATAGCTTAACTTATGTATCGACAGTTCAAGAAT TAAATACTGCTTTAGCTAAT
Downstream 100 bases:
>100_bases GTAACCTATCATTAATCGATATCAGCAATATTGCTGATATCGATTTTTATATGTTTAAAAATGGATTAATACCCCTTTAT TTGTTATAATGAATATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MNVKKIVLNNNLTANFNATRKVDFDLNGKTLTGNVSYDTDAEGTILLSNGTVTGNLTVDTPNVSFTNSATVNGTTTITDV ANNTFTNNGLLNIVIIQDATGTPRFINGQNSQIQNLVIDTMQPVNLQGGFTKVTVKQDTQLNLANGSVINDLNTDANVQA TVSGGTVKDTSGNGEVVIDDEEVVYPQVQIKGYVTYRVSKVDKNFYGVQARIVLPADQHVSLQEGDRVVVSLMNGDKVLA TSTTKEEVKDLVKDVFKNEFANEKHYASTLFVPNGSYPSGTWDTTAWDASYDVKPNRLKVEIKRDGKVISSTVSTVALDE AFTDGSSKVALSWEQILKENEPAVNDAMLKINTEKDPAKLKAVVESEALDLGLNLEGYNALSDSEGLGDYGQGDRQIAVI TDILANRADVKVETWTLEQFKKLFNAAVENRTATQDALFSVNSAKEAKDLKIEDFIGKVAVAYAKNQEVLPKVSENYVSS TVVTDLNNAINAFNAIQDDETKAAILVEVFNEGKNYTSWGQMAQAFFGAMQS
Sequences:
>Translated_532_residues MNVKKIVLNNNLTANFNATRKVDFDLNGKTLTGNVSYDTDAEGTILLSNGTVTGNLTVDTPNVSFTNSATVNGTTTITDV ANNTFTNNGLLNIVIIQDATGTPRFINGQNSQIQNLVIDTMQPVNLQGGFTKVTVKQDTQLNLANGSVINDLNTDANVQA TVSGGTVKDTSGNGEVVIDDEEVVYPQVQIKGYVTYRVSKVDKNFYGVQARIVLPADQHVSLQEGDRVVVSLMNGDKVLA TSTTKEEVKDLVKDVFKNEFANEKHYASTLFVPNGSYPSGTWDTTAWDASYDVKPNRLKVEIKRDGKVISSTVSTVALDE AFTDGSSKVALSWEQILKENEPAVNDAMLKINTEKDPAKLKAVVESEALDLGLNLEGYNALSDSEGLGDYGQGDRQIAVI TDILANRADVKVETWTLEQFKKLFNAAVENRTATQDALFSVNSAKEAKDLKIEDFIGKVAVAYAKNQEVLPKVSENYVSS TVVTDLNNAINAFNAIQDDETKAAILVEVFNEGKNYTSWGQMAQAFFGAMQS >Mature_532_residues MNVKKIVLNNNLTANFNATRKVDFDLNGKTLTGNVSYDTDAEGTILLSNGTVTGNLTVDTPNVSFTNSATVNGTTTITDV ANNTFTNNGLLNIVIIQDATGTPRFINGQNSQIQNLVIDTMQPVNLQGGFTKVTVKQDTQLNLANGSVINDLNTDANVQA TVSGGTVKDTSGNGEVVIDDEEVVYPQVQIKGYVTYRVSKVDKNFYGVQARIVLPADQHVSLQEGDRVVVSLMNGDKVLA TSTTKEEVKDLVKDVFKNEFANEKHYASTLFVPNGSYPSGTWDTTAWDASYDVKPNRLKVEIKRDGKVISSTVSTVALDE AFTDGSSKVALSWEQILKENEPAVNDAMLKINTEKDPAKLKAVVESEALDLGLNLEGYNALSDSEGLGDYGQGDRQIAVI TDILANRADVKVETWTLEQFKKLFNAAVENRTATQDALFSVNSAKEAKDLKIEDFIGKVAVAYAKNQEVLPKVSENYVSS TVVTDLNNAINAFNAIQDDETKAAILVEVFNEGKNYTSWGQMAQAFFGAMQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57726; Mature: 57726
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKKIVLNNNLTANFNATRKVDFDLNGKTLTGNVSYDTDAEGTILLSNGTVTGNLTVDT CCCEEEEECCCEEECCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEEEEEEC PNVSFTNSATVNGTTTITDVANNTFTNNGLLNIVIIQDATGTPRFINGQNSQIQNLVIDT CCCEECCCEEECCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCEECCCCCHHHHHHHCC MQPVNLQGGFTKVTVKQDTQLNLANGSVINDLNTDANVQATVSGGTVKDTSGNGEVVIDD CCCCCCCCCEEEEEEECCCEEEECCCCEEECCCCCCCEEEEECCCEEEECCCCCCEEECC EEVVYPQVQIKGYVTYRVSKVDKNFYGVQARIVLPADQHVSLQEGDRVVVSLMNGDKVLA CCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEE TSTTKEEVKDLVKDVFKNEFANEKHYASTLFVPNGSYPSGTWDTTAWDASYDVKPNRLKV ECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEE EIKRDGKVISSTVSTVALDEAFTDGSSKVALSWEQILKENEPAVNDAMLKINTEKDPAKL EEECCCEEEHHHHHHEEEHHHHCCCCCEEEEEHHHHHCCCCCCCCCEEEEEECCCCHHHH KAVVESEALDLGLNLEGYNALSDSEGLGDYGQGDRQIAVITDILANRADVKVETWTLEQF HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEEEEHHHH KKLFNAAVENRTATQDALFSVNSAKEAKDLKIEDFIGKVAVAYAKNQEVLPKVSENYVSS HHHHHHHHCCCCCCHHHHEECCCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHH TVVTDLNNAINAFNAIQDDETKAAILVEVFNEGKNYTSWGQMAQAFFGAMQS HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNVKKIVLNNNLTANFNATRKVDFDLNGKTLTGNVSYDTDAEGTILLSNGTVTGNLTVDT CCCEEEEECCCEEECCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEEEEEEC PNVSFTNSATVNGTTTITDVANNTFTNNGLLNIVIIQDATGTPRFINGQNSQIQNLVIDT CCCEECCCEEECCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCEECCCCCHHHHHHHCC MQPVNLQGGFTKVTVKQDTQLNLANGSVINDLNTDANVQATVSGGTVKDTSGNGEVVIDD CCCCCCCCCEEEEEEECCCEEEECCCCEEECCCCCCCEEEEECCCEEEECCCCCCEEECC EEVVYPQVQIKGYVTYRVSKVDKNFYGVQARIVLPADQHVSLQEGDRVVVSLMNGDKVLA CCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEE TSTTKEEVKDLVKDVFKNEFANEKHYASTLFVPNGSYPSGTWDTTAWDASYDVKPNRLKV ECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCEEEE EIKRDGKVISSTVSTVALDEAFTDGSSKVALSWEQILKENEPAVNDAMLKINTEKDPAKL EEECCCEEEHHHHHHEEEHHHHCCCCCEEEEEHHHHHCCCCCCCCCEEEEEECCCCHHHH KAVVESEALDLGLNLEGYNALSDSEGLGDYGQGDRQIAVITDILANRADVKVETWTLEQF HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEEEEHHHH KKLFNAAVENRTATQDALFSVNSAKEAKDLKIEDFIGKVAVAYAKNQEVLPKVSENYVSS HHHHHHHHCCCCCCHHHHEECCCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHH TVVTDLNNAINAFNAIQDDETKAAILVEVFNEGKNYTSWGQMAQAFFGAMQS HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA