| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916799
Identifier: 229916799
GI number: 229916799
Start: 1029735
End: 1031804
Strand: Reverse
Name: 229916799
Synonym: EAT1b_1072
Alternate gene names: NA
Gene position: 1031804-1029735 (Counterclockwise)
Preceding gene: 229916800
Following gene: 229916798
Centisome position: 34.39
GC content: 58.55
Gene sequence:
>2070_bases ATGGAACATTCAATCGCAAGGCTCGTCGCCCAATTTGGCGGCTCGCTCGCGGCACGGGGGAGCCACGGGTGGGACGTCGT CATCTCGGCGGGGACGATGTGTTATCAGTGGAAAGGAAGACGGGTCGTACCGGAGGCGCGACTCGAGAAGACCGGGACAG GTCGGCTCATACGCCCGTACGGTCGTTATTACGTCGTTCGTCTTGACGGCAGACAGATGCTCGTCTCAGCGTCTGAGGCG ATGCTCGTTATGATGCGCCCGCTCACGAAAGCGAGGCTGTCCGACCGGATGGACCGCCTGCTCGTGCATCAGTACATCCA GGACAAGCGGCCGATCGCCCCATATCGATATGAGCGGCTGACGGACGACCAGGCCGTTCGGTTCGCGGACGGTGTCTTAC AAGGCGACTGGTACATTCCGGCAGCGCCCGATGCGTTACGTGTCGCGGACGTCACCACGTTCGATTGGGATCAGATGGTG CCGCGGGTGGACAACAACTCCTTTTACCTCCAACTCCATTATTTGACGACAGTCCATCAGCTGACCCGTGCCTTCGAGGT GACGGGAGAAACGGCTTATGTGGAACACGCCGCTCGGATCGTCGATAGTTGGCATACACGTCATCCTGCATTCACGGTCA GTCGGAAGCGTGAGGCGTACCATGAGCACGGCACGGCAATCCGCGTGTTTCATCTGCTCGGATTCTTTGAGGCGTACCGC TGTGCAACGATCGAACGTGACCCATCCATGACCGAGAAGTTATTGAAGATGCTGTACGATCATGCCGTCCTGTTGGCGAC GCCGACGTTTTATCGGCCGCGTCATAATCACGGGCTGTTCCAGGACATGGCGCTCTTCGCCATCGCCTCCTGTTTCCCAG AGTTCGACCGAAGCCCGGAATGGGAACGGGTCGCCCGCGCGCGTCTCGATGCCCAGCTCGATTCGAGTCTCGCCACAGAC GGGACCCATCTCGAACATTCGCCGGGCTATCACGTGTACGTCTATCATATGTTGAGCCGCTTCGTCGACTGGGCGAGCGT GAACGGATTCTCCTTATCCGACCGGTTTGACGTCATCGACGCGATGCCGGACCGTCTCGTCCATCTGATCAAGCCGAACC GGACCCTCCCGATGGTCGGCGACACGGGAGGACAGATTCGGGGACGGCATCTGATTCCAGACATCGAATCACATCCGTCA CTCGGTTACGCGTTGAGCGGGGGAGGGGAAGGGGTTTGTCCGTCTGAACGGATGGTAAACCTCGGCTCGAACTATGCCGT CATGCGTGAATATTGGACCCATGTAAAGCGTCCCTTCAGTGATGCGACCTACATTTTGATGACGGCGGGCTATCACGGTG CGGCCCACAAGCATGCGGACGATTTGAGCCTCGAACTGTACGGGCTCGGGCGTGACTTCATCGTCGAGACGGGGCGATAT GGGTATGCGGACTGCGAGGAACGTTTGGAGGCGATGCGCGTCACGTCACACAACACCGTGCATCGCCTCGGGGACGAGCT CGATTTGTCGGTCGAGCGGGTCGGAGAAAGTGGGATTGTATCTGTTGAACCGATTGGAAAGCAGGTGGTGGCGACAGGGG TGAGCCGGCTCATCGGAAAAGGGGCCCTCCACACTCGGAAAGTCGTCTACGATCAAGCACGGACGCTCGTCGTCTTCGAC CGCATCACGTCACCAGAACCGGATCTGTTCGTCCAGCGCTTCCATGTGGCGCCGGGGCTCGACCTCGTCGAGGGGTCGCC GGAGTCCCAGAACGTCCGATTCATGGATGCGTCGAATCGCGCCATGCAGATCGTCCAACTCATGACAGGGGACGAATCGT ATATGACAATCGAAGAAAGTCACGTGTCGGCTCGTGATTTCGAATGGGTGAGTCGTCCACAGGTCGTATCCATCGAATGT GGCAAAGACGTCCGCTTCTTGACCCTCGTCCGACTTGACCGGACGCATTCTCGCATCGTGAAGACGCAGGTGGAAGAAAC AGGGGATAGGTACATCGTCTCATATTGGCTTGAGAGCGGGACAAAGCACGTCATCCGGATTCCGTATTGA
Upstream 100 bases:
>100_bases AAAGCTGGGCTTTTTTGTGTGAACGAATGGGTAACTCTTGAATCCCACCATTTGCTAAGGTAGAATTTTCAAGTATAACA AATGACAAGTGAGGGAACGA
Downstream 100 bases:
>100_bases CTCGATTATAAAAAAAACAGACGAATTTGAGTTTTTCCTTGATGATTTTTGCCAACAATATTACAATAATTGTATAAGAA TCATGTATATCATTTACATA
Product: Heparinase II/III family protein
Products: NA
Alternate protein names: Heparinase III Protein; Heparinase II/III-Like; Glycosyltransferase
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MEHSIARLVAQFGGSLAARGSHGWDVVISAGTMCYQWKGRRVVPEARLEKTGTGRLIRPYGRYYVVRLDGRQMLVSASEA MLVMMRPLTKARLSDRMDRLLVHQYIQDKRPIAPYRYERLTDDQAVRFADGVLQGDWYIPAAPDALRVADVTTFDWDQMV PRVDNNSFYLQLHYLTTVHQLTRAFEVTGETAYVEHAARIVDSWHTRHPAFTVSRKREAYHEHGTAIRVFHLLGFFEAYR CATIERDPSMTEKLLKMLYDHAVLLATPTFYRPRHNHGLFQDMALFAIASCFPEFDRSPEWERVARARLDAQLDSSLATD GTHLEHSPGYHVYVYHMLSRFVDWASVNGFSLSDRFDVIDAMPDRLVHLIKPNRTLPMVGDTGGQIRGRHLIPDIESHPS LGYALSGGGEGVCPSERMVNLGSNYAVMREYWTHVKRPFSDATYILMTAGYHGAAHKHADDLSLELYGLGRDFIVETGRY GYADCEERLEAMRVTSHNTVHRLGDELDLSVERVGESGIVSVEPIGKQVVATGVSRLIGKGALHTRKVVYDQARTLVVFD RITSPEPDLFVQRFHVAPGLDLVEGSPESQNVRFMDASNRAMQIVQLMTGDESYMTIEESHVSARDFEWVSRPQVVSIEC GKDVRFLTLVRLDRTHSRIVKTQVEETGDRYIVSYWLESGTKHVIRIPY
Sequences:
>Translated_689_residues MEHSIARLVAQFGGSLAARGSHGWDVVISAGTMCYQWKGRRVVPEARLEKTGTGRLIRPYGRYYVVRLDGRQMLVSASEA MLVMMRPLTKARLSDRMDRLLVHQYIQDKRPIAPYRYERLTDDQAVRFADGVLQGDWYIPAAPDALRVADVTTFDWDQMV PRVDNNSFYLQLHYLTTVHQLTRAFEVTGETAYVEHAARIVDSWHTRHPAFTVSRKREAYHEHGTAIRVFHLLGFFEAYR CATIERDPSMTEKLLKMLYDHAVLLATPTFYRPRHNHGLFQDMALFAIASCFPEFDRSPEWERVARARLDAQLDSSLATD GTHLEHSPGYHVYVYHMLSRFVDWASVNGFSLSDRFDVIDAMPDRLVHLIKPNRTLPMVGDTGGQIRGRHLIPDIESHPS LGYALSGGGEGVCPSERMVNLGSNYAVMREYWTHVKRPFSDATYILMTAGYHGAAHKHADDLSLELYGLGRDFIVETGRY GYADCEERLEAMRVTSHNTVHRLGDELDLSVERVGESGIVSVEPIGKQVVATGVSRLIGKGALHTRKVVYDQARTLVVFD RITSPEPDLFVQRFHVAPGLDLVEGSPESQNVRFMDASNRAMQIVQLMTGDESYMTIEESHVSARDFEWVSRPQVVSIEC GKDVRFLTLVRLDRTHSRIVKTQVEETGDRYIVSYWLESGTKHVIRIPY >Mature_689_residues MEHSIARLVAQFGGSLAARGSHGWDVVISAGTMCYQWKGRRVVPEARLEKTGTGRLIRPYGRYYVVRLDGRQMLVSASEA MLVMMRPLTKARLSDRMDRLLVHQYIQDKRPIAPYRYERLTDDQAVRFADGVLQGDWYIPAAPDALRVADVTTFDWDQMV PRVDNNSFYLQLHYLTTVHQLTRAFEVTGETAYVEHAARIVDSWHTRHPAFTVSRKREAYHEHGTAIRVFHLLGFFEAYR CATIERDPSMTEKLLKMLYDHAVLLATPTFYRPRHNHGLFQDMALFAIASCFPEFDRSPEWERVARARLDAQLDSSLATD GTHLEHSPGYHVYVYHMLSRFVDWASVNGFSLSDRFDVIDAMPDRLVHLIKPNRTLPMVGDTGGQIRGRHLIPDIESHPS LGYALSGGGEGVCPSERMVNLGSNYAVMREYWTHVKRPFSDATYILMTAGYHGAAHKHADDLSLELYGLGRDFIVETGRY GYADCEERLEAMRVTSHNTVHRLGDELDLSVERVGESGIVSVEPIGKQVVATGVSRLIGKGALHTRKVVYDQARTLVVFD RITSPEPDLFVQRFHVAPGLDLVEGSPESQNVRFMDASNRAMQIVQLMTGDESYMTIEESHVSARDFEWVSRPQVVSIEC GKDVRFLTLVRLDRTHSRIVKTQVEETGDRYIVSYWLESGTKHVIRIPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78408; Mature: 78408
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHSIARLVAQFGGSLAARGSHGWDVVISAGTMCYQWKGRRVVPEARLEKTGTGRLIRPY CCHHHHHHHHHHCCCEEECCCCCCEEEEECCCEEEEECCCEECCHHHHCCCCCCCEEEEC GRYYVVRLDGRQMLVSASEAMLVMMRPLTKARLSDRMDRLLVHQYIQDKRPIAPYRYERL CCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC TDDQAVRFADGVLQGDWYIPAAPDALRVADVTTFDWDQMVPRVDNNSFYLQLHYLTTVHQ CCCHHHHHHCCEEECCEECCCCCCCEEEEEEEECCHHHHCCCCCCCEEEEEEHHHHHHHH LTRAFEVTGETAYVEHAARIVDSWHTRHPAFTVSRKREAYHEHGTAIRVFHLLGFFEAYR HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEHHHHHHHHHHHHH CATIERDPSMTEKLLKMLYDHAVLLATPTFYRPRHNHGLFQDMALFAIASCFPEFDRSPE HEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC WERVARARLDAQLDSSLATDGTHLEHSPGYHVYVYHMLSRFVDWASVNGFSLSDRFDVID HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHH AMPDRLVHLIKPNRTLPMVGDTGGQIRGRHLIPDIESHPSLGYALSGGGEGVCPSERMVN HCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHH LGSNYAVMREYWTHVKRPFSDATYILMTAGYHGAAHKHADDLSLELYGLGRDFIVETGRY CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHEEECCCC GYADCEERLEAMRVTSHNTVHRLGDELDLSVERVGESGIVSVEPIGKQVVATGVSRLIGK CCCCHHHHHHHHHHCCCCHHHHCCCHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCC GALHTRKVVYDQARTLVVFDRITSPEPDLFVQRFHVAPGLDLVEGSPESQNVRFMDASNR CCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEECCCH AMQIVQLMTGDESYMTIEESHVSARDFEWVSRPQVVSIECGKDVRFLTLVRLDRTHSRIV HHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHH KTQVEETGDRYIVSYWLESGTKHVIRIPY HHHHHHCCCEEEEEEEECCCCCCEEECCC >Mature Secondary Structure MEHSIARLVAQFGGSLAARGSHGWDVVISAGTMCYQWKGRRVVPEARLEKTGTGRLIRPY CCHHHHHHHHHHCCCEEECCCCCCEEEEECCCEEEEECCCEECCHHHHCCCCCCCEEEEC GRYYVVRLDGRQMLVSASEAMLVMMRPLTKARLSDRMDRLLVHQYIQDKRPIAPYRYERL CCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC TDDQAVRFADGVLQGDWYIPAAPDALRVADVTTFDWDQMVPRVDNNSFYLQLHYLTTVHQ CCCHHHHHHCCEEECCEECCCCCCCEEEEEEEECCHHHHCCCCCCCEEEEEEHHHHHHHH LTRAFEVTGETAYVEHAARIVDSWHTRHPAFTVSRKREAYHEHGTAIRVFHLLGFFEAYR HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEHHHHHHHHHHHHH CATIERDPSMTEKLLKMLYDHAVLLATPTFYRPRHNHGLFQDMALFAIASCFPEFDRSPE HEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC WERVARARLDAQLDSSLATDGTHLEHSPGYHVYVYHMLSRFVDWASVNGFSLSDRFDVID HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHH AMPDRLVHLIKPNRTLPMVGDTGGQIRGRHLIPDIESHPSLGYALSGGGEGVCPSERMVN HCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHH LGSNYAVMREYWTHVKRPFSDATYILMTAGYHGAAHKHADDLSLELYGLGRDFIVETGRY CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHEEECCCC GYADCEERLEAMRVTSHNTVHRLGDELDLSVERVGESGIVSVEPIGKQVVATGVSRLIGK CCCCHHHHHHHHHHCCCCHHHHCCCHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCC GALHTRKVVYDQARTLVVFDRITSPEPDLFVQRFHVAPGLDLVEGSPESQNVRFMDASNR CCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEECCCH AMQIVQLMTGDESYMTIEESHVSARDFEWVSRPQVVSIECGKDVRFLTLVRLDRTHSRIV HHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHH KTQVEETGDRYIVSYWLESGTKHVIRIPY HHHHHHCCCEEEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA