| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yxiE [H]
Identifier: 229916758
GI number: 229916758
Start: 978923
End: 979336
Strand: Direct
Name: yxiE [H]
Synonym: EAT1b_1031
Alternate gene names: 229916758
Gene position: 978923-979336 (Clockwise)
Preceding gene: 229916757
Following gene: 229916759
Centisome position: 32.63
GC content: 49.28
Gene sequence:
>414_bases ATGGGAAAGGTATTTTTGGCGGCTGACGGTTCTGCCCACTCAAAACGTGCACTTGAAAAGGCGATTCAACTCGCAAAGGC TTCGAATGCGTCAATTGACATCGTGCATGTCATCAGTGCGAAAGAATCAAAAGAAGCGGCCCTCAATTCGACCGGGAAAA TCGACTTGGAGACGAAGCGAAAGCAGATGCTCAAGCCACTGTTCGATTTGGCGGAAGCAGAAGGCATTGCCTACGAATAC ATCGAACTTCGTGGGGAGCCAGACGTCGAGCTCGTCAAATATGCAAATCATGAGCCGTACGAATATGTCGTCGTCGGATC ACGTGGATTGAACACATTCCAAGAGTTCGTCCTTGGTAGTGTGAGTCATAAACTGGCCAAACGCGCTCTCGCCCCTGTCA TTATCGTGAAATGA
Upstream 100 bases:
>100_bases GAAGCAACAAGACGCGAACGCGGGACACTGATTCATCGTTCCACTGACTCAATAAATCACCTATACTAAAAGTAGAACGT GCGAAAGAGGAGGAGTTTTC
Downstream 100 bases:
>100_bases CGCACCGTCCCCATCTCTTCGTGAGATGGGGATTTTTTGTGTCACATACAGGGGACATACCGTGCATGTAGAATGTGTTA AAGACAGCTAATTCAAAAGG
Product: UspA domain protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGKVFLAADGSAHSKRALEKAIQLAKASNASIDIVHVISAKESKEAALNSTGKIDLETKRKQMLKPLFDLAEAEGIAYEY IELRGEPDVELVKYANHEPYEYVVVGSRGLNTFQEFVLGSVSHKLAKRALAPVIIVK
Sequences:
>Translated_137_residues MGKVFLAADGSAHSKRALEKAIQLAKASNASIDIVHVISAKESKEAALNSTGKIDLETKRKQMLKPLFDLAEAEGIAYEY IELRGEPDVELVKYANHEPYEYVVVGSRGLNTFQEFVLGSVSHKLAKRALAPVIIVK >Mature_136_residues GKVFLAADGSAHSKRALEKAIQLAKASNASIDIVHVISAKESKEAALNSTGKIDLETKRKQMLKPLFDLAEAEGIAYEYI ELRGEPDVELVKYANHEPYEYVVVGSRGLNTFQEFVLGSVSHKLAKRALAPVIIVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 14994; Mature: 14863
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVFLAADGSAHSKRALEKAIQLAKASNASIDIVHVISAKESKEAALNSTGKIDLETKR CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCEEEHHHH KQMLKPLFDLAEAEGIAYEYIELRGEPDVELVKYANHEPYEYVVVGSRGLNTFQEFVLGS HHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH VSHKLAKRALAPVIIVK HHHHHHHHHHCCEEEEC >Mature Secondary Structure GKVFLAADGSAHSKRALEKAIQLAKASNASIDIVHVISAKESKEAALNSTGKIDLETKR CEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCEEEHHHH KQMLKPLFDLAEAEGIAYEYIELRGEPDVELVKYANHEPYEYVVVGSRGLNTFQEFVLGS HHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH VSHKLAKRALAPVIIVK HHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]