Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916750

Identifier: 229916750

GI number: 229916750

Start: 970789

End: 971358

Strand: Reverse

Name: 229916750

Synonym: EAT1b_1023

Alternate gene names: NA

Gene position: 971358-970789 (Counterclockwise)

Preceding gene: 229916751

Following gene: 229916748

Centisome position: 32.38

GC content: 45.44

Gene sequence:

>570_bases
ATGGATTATAAGATGTTACATGAGAAGTTTGAGCGACGGAAGCAGTGGCTCATTTTTGACAAAGAAGAAGTCGTCCGTCG
TGTCATGGTGCGCTACAAGGCAAGGATTATCCCGAAGACGGACATCATGGACTTGGTGAACGACGATCAACTGTCGTATG
AACATATCTTTTGTTGCTTAACGATTGATGACCCAAGAATGCTCGATCAAGTCTTCACGGCGAAAGAGAGAAAAGACCAT
CAGTGGGAGATTGATGACAATGCGAGGCGTGGGATGGTATATAAGCACAAAGATGAGGCACATCGACTTTACAACCAGTT
GATTATCGATGAACAGGAAGGTCGCCGACTCGACATCGTCTTCGAGAGCAAGGATGGGAAGTATGTGACCGGTTTTTTGA
CAAGAGACATGTCAGAGCAAGTCGCCTCTTATATTTTTGCACATGTCGGAGGCGCCAAGTTCACAGGTCTCGTCCCACGT
TCCTTCTTACCAGCGGACTTAACAGATGAAGAAATCAAGATGAGCTATCGGTGGTATTTGGAATCGCTTGAGAGATGGAA
TAAGTTATGA

Upstream 100 bases:

>100_bases
GAAATAAGAACTATCAGTTGTTCAAAAAATACGGGAACTGAGCAAGACGACGTCCATTGCGGGCGTCGTTTTTTGATATG
CTGGACGTGAGGTGAAGCGG

Downstream 100 bases:

>100_bases
AAGAACCTCTCACACACGTGTGAGAGGTTAGTTGGCTTTCCGTTGATTCCATTTTCCGATTCGATTTCGCCCATTCCGTT
TGGCGACATAAAGCCCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MDYKMLHEKFERRKQWLIFDKEEVVRRVMVRYKARIIPKTDIMDLVNDDQLSYEHIFCCLTIDDPRMLDQVFTAKERKDH
QWEIDDNARRGMVYKHKDEAHRLYNQLIIDEQEGRRLDIVFESKDGKYVTGFLTRDMSEQVASYIFAHVGGAKFTGLVPR
SFLPADLTDEEIKMSYRWYLESLERWNKL

Sequences:

>Translated_189_residues
MDYKMLHEKFERRKQWLIFDKEEVVRRVMVRYKARIIPKTDIMDLVNDDQLSYEHIFCCLTIDDPRMLDQVFTAKERKDH
QWEIDDNARRGMVYKHKDEAHRLYNQLIIDEQEGRRLDIVFESKDGKYVTGFLTRDMSEQVASYIFAHVGGAKFTGLVPR
SFLPADLTDEEIKMSYRWYLESLERWNKL
>Mature_189_residues
MDYKMLHEKFERRKQWLIFDKEEVVRRVMVRYKARIIPKTDIMDLVNDDQLSYEHIFCCLTIDDPRMLDQVFTAKERKDH
QWEIDDNARRGMVYKHKDEAHRLYNQLIIDEQEGRRLDIVFESKDGKYVTGFLTRDMSEQVASYIFAHVGGAKFTGLVPR
SFLPADLTDEEIKMSYRWYLESLERWNKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22850; Mature: 22850

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKMLHEKFERRKQWLIFDKEEVVRRVMVRYKARIIPKTDIMDLVNDDQLSYEHIFCCL
CCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEE
TIDDPRMLDQVFTAKERKDHQWEIDDNARRGMVYKHKDEAHRLYNQLIIDEQEGRRLDIV
EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEE
FESKDGKYVTGFLTRDMSEQVASYIFAHVGGAKFTGLVPRSFLPADLTDEEIKMSYRWYL
EECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
ESLERWNKL
HHHHHHCCC
>Mature Secondary Structure
MDYKMLHEKFERRKQWLIFDKEEVVRRVMVRYKARIIPKTDIMDLVNDDQLSYEHIFCCL
CCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEE
TIDDPRMLDQVFTAKERKDHQWEIDDNARRGMVYKHKDEAHRLYNQLIIDEQEGRRLDIV
EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEE
FESKDGKYVTGFLTRDMSEQVASYIFAHVGGAKFTGLVPRSFLPADLTDEEIKMSYRWYL
EECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
ESLERWNKL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA