Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916696

Identifier: 229916696

GI number: 229916696

Start: 914866

End: 915978

Strand: Reverse

Name: 229916696

Synonym: EAT1b_0969

Alternate gene names: NA

Gene position: 915978-914866 (Counterclockwise)

Preceding gene: 229916697

Following gene: 229916695

Centisome position: 30.53

GC content: 47.62

Gene sequence:

>1113_bases
ATGAGCCAGTATTTTTCATCATCTTACGAAGAGTCGCGAGAGAAGTTCTTGAACTTACTGTCTGAAGTGAAACGATTTTA
TCCGAAAGCGGAGCTGTTGACACACTCGATCGGGGATGAGAGTATCGACGTCATTTTAGGAGAACCGAAACGAGAACGAA
AAGCGATGATTCTCATGACGATCGGGGAACATGGGATTGAAGGGTATGCGGGCGCCGCGGTGACCCATCAATTTGTACAA
ACGCAACTCGCGCATGTCCGTCATGAGACGACGGGGATTTGTCTCATACATGCAGTGAATCCATGGGGGATGAAACACTT
TCGACGTGTCAATGAACACAATGTCGATTTGAACAGAAATTACGTCATTGATCGTGAGTCGGTCCCATATAACGTGAACC
GTGAATATGAGCTGATGCGCCATCTCTTCGTACCGGACGGAGTAATTGACGACTACCATGAGGCGCGTGAACAGATCTAT
TCATTTCTCGGCTCTGGAATTAAGCTTGATGGCTTCAAAGCGATGAGTGGAGCAAAAGGGATGGGGCAATATCAATTCCC
GAAAGGGGTGTATTACGGGGGAGATGAAGACGAACCGTCTGCCATCTTTTTGAAGGGGATTCAACATGATTTACTTGAAC
GCTATGGAAAAGTCGTCCATCTCGATTGGCATACCGCACTCGGACCGACAAACGAGGTGACGATGGTCATCAGCAAACGG
GACGGTCGCACGGAAGATGAGTTAAAACAAGCGTACGGTCTCGACAACGTCAACGTGTATGACCCGGACGAGGTACTCGG
AGATTCGACGAATCATTTTTACTACGTGCGCGATACGGAATACCCGGACAAGGGTCTCGTTTCTGCCTTATTTGAATTCG
GTACGTTTGGAACGTCGACAAAAGCATCCATCCGTGAATTTTTAACGATTATTTTAGAGAACCGGCTGTTCTTTGAAGGG
ACAAAGGACCCTGAGGCACGAAACGGTATTCAAAACGAATTCATGGCGATGTTCTATCCGGAAAACGCGGATTGGCGAGA
AGCTGTTTTACGAGAAGGAGCGAAAGCCGTTGAAGGTTATCTAAAAGGTGAAGCGCTCTGGCGCGACACATAA

Upstream 100 bases:

>100_bases
TCCGCACCCCTTGATTGAAACGCTTCCTCTCAAAGGAGGCGTTTTTAGATTGCCTCAGGATGGGAAAGGATAGAGAGAAG
AAAGATTGGAGGAGAGTGCG

Downstream 100 bases:

>100_bases
GAGGGTTTCTCGAAGTTGGAATAGGGAACAATGAAGTTGTGAGTGTTTTCGCTAAATAATGACTGTGGAGGTTGGATGAT
GGGATATATTACAGCACATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSQYFSSSYEESREKFLNLLSEVKRFYPKAELLTHSIGDESIDVILGEPKRERKAMILMTIGEHGIEGYAGAAVTHQFVQ
TQLAHVRHETTGICLIHAVNPWGMKHFRRVNEHNVDLNRNYVIDRESVPYNVNREYELMRHLFVPDGVIDDYHEAREQIY
SFLGSGIKLDGFKAMSGAKGMGQYQFPKGVYYGGDEDEPSAIFLKGIQHDLLERYGKVVHLDWHTALGPTNEVTMVISKR
DGRTEDELKQAYGLDNVNVYDPDEVLGDSTNHFYYVRDTEYPDKGLVSALFEFGTFGTSTKASIREFLTIILENRLFFEG
TKDPEARNGIQNEFMAMFYPENADWREAVLREGAKAVEGYLKGEALWRDT

Sequences:

>Translated_370_residues
MSQYFSSSYEESREKFLNLLSEVKRFYPKAELLTHSIGDESIDVILGEPKRERKAMILMTIGEHGIEGYAGAAVTHQFVQ
TQLAHVRHETTGICLIHAVNPWGMKHFRRVNEHNVDLNRNYVIDRESVPYNVNREYELMRHLFVPDGVIDDYHEAREQIY
SFLGSGIKLDGFKAMSGAKGMGQYQFPKGVYYGGDEDEPSAIFLKGIQHDLLERYGKVVHLDWHTALGPTNEVTMVISKR
DGRTEDELKQAYGLDNVNVYDPDEVLGDSTNHFYYVRDTEYPDKGLVSALFEFGTFGTSTKASIREFLTIILENRLFFEG
TKDPEARNGIQNEFMAMFYPENADWREAVLREGAKAVEGYLKGEALWRDT
>Mature_369_residues
SQYFSSSYEESREKFLNLLSEVKRFYPKAELLTHSIGDESIDVILGEPKRERKAMILMTIGEHGIEGYAGAAVTHQFVQT
QLAHVRHETTGICLIHAVNPWGMKHFRRVNEHNVDLNRNYVIDRESVPYNVNREYELMRHLFVPDGVIDDYHEAREQIYS
FLGSGIKLDGFKAMSGAKGMGQYQFPKGVYYGGDEDEPSAIFLKGIQHDLLERYGKVVHLDWHTALGPTNEVTMVISKRD
GRTEDELKQAYGLDNVNVYDPDEVLGDSTNHFYYVRDTEYPDKGLVSALFEFGTFGTSTKASIREFLTIILENRLFFEGT
KDPEARNGIQNEFMAMFYPENADWREAVLREGAKAVEGYLKGEALWRDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42397; Mature: 42266

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYFSSSYEESREKFLNLLSEVKRFYPKAELLTHSIGDESIDVILGEPKRERKAMILMT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE
IGEHGIEGYAGAAVTHQFVQTQLAHVRHETTGICLIHAVNPWGMKHFRRVNEHNVDLNRN
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCC
YVIDRESVPYNVNREYELMRHLFVPDGVIDDYHEAREQIYSFLGSGIKLDGFKAMSGAKG
EEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
MGQYQFPKGVYYGGDEDEPSAIFLKGIQHDLLERYGKVVHLDWHTALGPTNEVTMVISKR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECC
DGRTEDELKQAYGLDNVNVYDPDEVLGDSTNHFYYVRDTEYPDKGLVSALFEFGTFGTST
CCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCH
KASIREFLTIILENRLFFEGTKDPEARNGIQNEFMAMFYPENADWREAVLREGAKAVEGY
HHHHHHHHHHHHHCCEEECCCCCCHHHCCHHHCEEEEECCCCCCHHHHHHHCCHHHHHHH
LKGEALWRDT
HCCCEECCCC
>Mature Secondary Structure 
SQYFSSSYEESREKFLNLLSEVKRFYPKAELLTHSIGDESIDVILGEPKRERKAMILMT
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE
IGEHGIEGYAGAAVTHQFVQTQLAHVRHETTGICLIHAVNPWGMKHFRRVNEHNVDLNRN
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCC
YVIDRESVPYNVNREYELMRHLFVPDGVIDDYHEAREQIYSFLGSGIKLDGFKAMSGAKG
EEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
MGQYQFPKGVYYGGDEDEPSAIFLKGIQHDLLERYGKVVHLDWHTALGPTNEVTMVISKR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECC
DGRTEDELKQAYGLDNVNVYDPDEVLGDSTNHFYYVRDTEYPDKGLVSALFEFGTFGTST
CCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCH
KASIREFLTIILENRLFFEGTKDPEARNGIQNEFMAMFYPENADWREAVLREGAKAVEGY
HHHHHHHHHHHHHCCEEECCCCCCHHHCCHHHCEEEEECCCCCCHHHHHHHCCHHHHHHH
LKGEALWRDT
HCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA