| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is flgK [H]
Identifier: 229916660
GI number: 229916660
Start: 881259
End: 882773
Strand: Reverse
Name: flgK [H]
Synonym: EAT1b_0932
Alternate gene names: 229916660
Gene position: 882773-881259 (Counterclockwise)
Preceding gene: 229916661
Following gene: 229916659
Centisome position: 29.43
GC content: 50.3
Gene sequence:
>1515_bases ATGGGTTCAACATTTATGGGATTAGAGACGGCACGCCGCAGTCTCTCGACACACCAATGGGCGCTTCAAGCGACCGGGAA TAACGTGGCGAACGCCTCAAACCCTGGCTATTCGCGCCAACGACTCACACTCGGGATGACCGAACAGCTCTCGGTCAATT TTGGCGGGACGAAAGCCGGACAATTCGGGACAGGGGTACGCGGGGAGACGCTCGCCCGAATTCGCGATCTCATGATCGAT CAACAGTATCGTGACGAGTCGGTGAAGAACGCCTTCTATGCGACGAAAGAAGCGGCGTTCGGTCGAATGGAAGACATCAT CAACGAACCGTCTGAGAACGGGCTCGCCCATGCGCTCGATAAATTTTGGTCATCCCTTCAAGACTTGGCGGTCAACCCGG ATGATACGGGTGCGCGAAGCGTGGTTCGGCAGCGAGCGTTGACGCTGACACAAACGTTCAACTACATGTCTTCTTCGTTA TCGAAAGTACAAGAAGACTTGAAAGCAGAAGCGGGCGTCGTCACGAAAAAAATCAACGACTTATTGACGAAAATCGGTGA CGTTAACCGTCAAATCGGCGATGCGGAACCGCTTGGGGTCTTACCAAACGAATTGTATGATGAGCGCGATCGTTACATGG ACGAGTTGTCACAATATATCGAGTTCGAACGTGTCCCAGTTGATTACACGAACGGAGAGACACGCGGGAACTCGCAACGT GTCGCGGAAGGACGGATTGATATTCAGATTTCTGTGCCCGGAACACCGACTCCAACAAAGATTACGTTAGTGGATGGACT AACAGGCGGAGTTGGGAAAATTAACGACATGGAGATCACGGATGCGGCCGCAGGAACGACAACGCTCGTCTTTGACGATT TACCAAATGGGAAGTTGAAAGCGCTCGTTGATATGTACGGTTCAGCTACGGGAACAGAAACGCACGATGGAGCCTTTACC AAGATGTTGAAGGATTTAGACGTCATGGCAAAAGAGTTCACGACGGCATTTAATGATTTGCATAAGACTTTTTACGATGG GAATGTTCAAGACAACCCTCGCCAAACTGGTATTGACTTCTTTATTGTCGGCGATGCGAAGACCGTAACGGTCAATCCGA CAATTTTATCGAACTTGAACTTGATTGCCATCTCAAAAGACCAAAACATTGGAGACGGCAGTGGGGCTCTTGACTTGGCA AACTTAAAAAATGCGCAAATCACATTTACGGGTGGTTCATCCACTGCGACGACTTCAATCGGGAAGTACTATCAAAACGT CATCGGGAACATGGCTGTCGAGGCGAGCCAGAACGGCAACCTCGCCAAGAGTACATTTGCCCTGTTGAGCAGTTCGGACC AGCGTCGTCAGTCGGTCAGTGCCGTCTCGCTCGATGAAGAGATGACGATGATGATCCAGTATCAACACGCTTATAACGCG GCGGCACGTAACATCACGGCCGTCGATGAAATGTTAGATAAAATCATTAACGGCATGGGTGTCGTAGGGAGGTAA
Upstream 100 bases:
>100_bases GCATCTGGATATGCTCATGCCGGAAGCAGATGATTTCACATACGGACAACAAGCGTTCGAAACACGCTCGTTCAGCCGTG ACGTTTAAGGAGGAAGTGGA
Downstream 100 bases:
>100_bases TGACTGATGCGTGTCACACAGACAATGCTCACACAGACGAACTTGAAGCATTTATCCAGTAGCTACAACACACTTGCTCG CGTTCAGGAACAACTCATCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MGSTFMGLETARRSLSTHQWALQATGNNVANASNPGYSRQRLTLGMTEQLSVNFGGTKAGQFGTGVRGETLARIRDLMID QQYRDESVKNAFYATKEAAFGRMEDIINEPSENGLAHALDKFWSSLQDLAVNPDDTGARSVVRQRALTLTQTFNYMSSSL SKVQEDLKAEAGVVTKKINDLLTKIGDVNRQIGDAEPLGVLPNELYDERDRYMDELSQYIEFERVPVDYTNGETRGNSQR VAEGRIDIQISVPGTPTPTKITLVDGLTGGVGKINDMEITDAAAGTTTLVFDDLPNGKLKALVDMYGSATGTETHDGAFT KMLKDLDVMAKEFTTAFNDLHKTFYDGNVQDNPRQTGIDFFIVGDAKTVTVNPTILSNLNLIAISKDQNIGDGSGALDLA NLKNAQITFTGGSSTATTSIGKYYQNVIGNMAVEASQNGNLAKSTFALLSSSDQRRQSVSAVSLDEEMTMMIQYQHAYNA AARNITAVDEMLDKIINGMGVVGR
Sequences:
>Translated_504_residues MGSTFMGLETARRSLSTHQWALQATGNNVANASNPGYSRQRLTLGMTEQLSVNFGGTKAGQFGTGVRGETLARIRDLMID QQYRDESVKNAFYATKEAAFGRMEDIINEPSENGLAHALDKFWSSLQDLAVNPDDTGARSVVRQRALTLTQTFNYMSSSL SKVQEDLKAEAGVVTKKINDLLTKIGDVNRQIGDAEPLGVLPNELYDERDRYMDELSQYIEFERVPVDYTNGETRGNSQR VAEGRIDIQISVPGTPTPTKITLVDGLTGGVGKINDMEITDAAAGTTTLVFDDLPNGKLKALVDMYGSATGTETHDGAFT KMLKDLDVMAKEFTTAFNDLHKTFYDGNVQDNPRQTGIDFFIVGDAKTVTVNPTILSNLNLIAISKDQNIGDGSGALDLA NLKNAQITFTGGSSTATTSIGKYYQNVIGNMAVEASQNGNLAKSTFALLSSSDQRRQSVSAVSLDEEMTMMIQYQHAYNA AARNITAVDEMLDKIINGMGVVGR >Mature_503_residues GSTFMGLETARRSLSTHQWALQATGNNVANASNPGYSRQRLTLGMTEQLSVNFGGTKAGQFGTGVRGETLARIRDLMIDQ QYRDESVKNAFYATKEAAFGRMEDIINEPSENGLAHALDKFWSSLQDLAVNPDDTGARSVVRQRALTLTQTFNYMSSSLS KVQEDLKAEAGVVTKKINDLLTKIGDVNRQIGDAEPLGVLPNELYDERDRYMDELSQYIEFERVPVDYTNGETRGNSQRV AEGRIDIQISVPGTPTPTKITLVDGLTGGVGKINDMEITDAAAGTTTLVFDDLPNGKLKALVDMYGSATGTETHDGAFTK MLKDLDVMAKEFTTAFNDLHKTFYDGNVQDNPRQTGIDFFIVGDAKTVTVNPTILSNLNLIAISKDQNIGDGSGALDLAN LKNAQITFTGGSSTATTSIGKYYQNVIGNMAVEASQNGNLAKSTFALLSSSDQRRQSVSAVSLDEEMTMMIQYQHAYNAA ARNITAVDEMLDKIINGMGVVGR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=377, Percent_Identity=24.4031830238727, Blast_Score=83, Evalue=5e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 54725; Mature: 54594
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTFMGLETARRSLSTHQWALQATGNNVANASNPGYSRQRLTLGMTEQLSVNFGGTKAG CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCC QFGTGVRGETLARIRDLMIDQQYRDESVKNAFYATKEAAFGRMEDIINEPSENGLAHALD CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KFWSSLQDLAVNPDDTGARSVVRQRALTLTQTFNYMSSSLSKVQEDLKAEAGVVTKKIND HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTKIGDVNRQIGDAEPLGVLPNELYDERDRYMDELSQYIEFERVPVDYTNGETRGNSQR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VAEGRIDIQISVPGTPTPTKITLVDGLTGGVGKINDMEITDAAAGTTTLVFDDLPNGKLK EECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHH ALVDMYGSATGTETHDGAFTKMLKDLDVMAKEFTTAFNDLHKTFYDGNVQDNPRQTGIDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE FIVGDAKTVTVNPTILSNLNLIAISKDQNIGDGSGALDLANLKNAQITFTGGSSTATTSI EEECCCEEEEECCHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHH GKYYQNVIGNMAVEASQNGNLAKSTFALLSSSDQRRQSVSAVSLDEEMTMMIQYQHAYNA HHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHHH AARNITAVDEMLDKIINGMGVVGR HHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSTFMGLETARRSLSTHQWALQATGNNVANASNPGYSRQRLTLGMTEQLSVNFGGTKAG CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCC QFGTGVRGETLARIRDLMIDQQYRDESVKNAFYATKEAAFGRMEDIINEPSENGLAHALD CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KFWSSLQDLAVNPDDTGARSVVRQRALTLTQTFNYMSSSLSKVQEDLKAEAGVVTKKIND HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTKIGDVNRQIGDAEPLGVLPNELYDERDRYMDELSQYIEFERVPVDYTNGETRGNSQR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VAEGRIDIQISVPGTPTPTKITLVDGLTGGVGKINDMEITDAAAGTTTLVFDDLPNGKLK EECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHH ALVDMYGSATGTETHDGAFTKMLKDLDVMAKEFTTAFNDLHKTFYDGNVQDNPRQTGIDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE FIVGDAKTVTVNPTILSNLNLIAISKDQNIGDGSGALDLANLKNAQITFTGGSSTATTSI EEECCCEEEEECCHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHH GKYYQNVIGNMAVEASQNGNLAKSTFALLSSSDQRRQSVSAVSLDEEMTMMIQYQHAYNA HHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHHH AARNITAVDEMLDKIINGMGVVGR HHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]