| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916649
Identifier: 229916649
GI number: 229916649
Start: 873199
End: 873696
Strand: Direct
Name: 229916649
Synonym: EAT1b_0921
Alternate gene names: NA
Gene position: 873199-873696 (Clockwise)
Preceding gene: 229916639
Following gene: 229916653
Centisome position: 29.11
GC content: 48.39
Gene sequence:
>498_bases ATGTCTAACGAAACTACTTTGACGCGCGCTCAGCTCGACGCGCTCTTGAAAAACGTCTTCGCCCTTCAAATCCCGGTCAT CGAGAAATTCATGACGGATTTGTTTAAACAATATGTCTCGACGGCATCTACGTTCAAACAGGACATGGACACGATGAAAG CGACGGACTGGCACAAGCATTTCTTCGGTCAAAAAGTGATGCCTCACCTCTTCATCGAGAACCTCGGTTTCGGCGCATCG TTCCGTCACCAAGGTCAAGAGAAGGTCGTCAGCATCCCTGAGAACATGACGGTCGTCAAGCCGGACTCGGACTCACAAAT CAAAGAGATTTTAGAGAATCTCGACCAGACGCTCGCCTCGATGGACGGCGTCAAAAACAAAGGACTCGTCAAGAAGTTCT ACAAAGAAACGCTCGAACTCATCTGCCAACTCGGTAGCCGTACCGGTATGATGGATGATTTCTATGACAAAGTCAAAGGC AGTTTGACAACAAGTTGA
Upstream 100 bases:
>100_bases TTTTCATTAAATATTCTGAAAAAATGTTTCCCCTTACATTGACGAGTGTCCGTCAATCCCATACGATGGTAGTAACGTAC TATAGAAAAGAGGAACTGAC
Downstream 100 bases:
>100_bases TGACAATCCCCTCGTCCATAAGAGCGAGGGGATTTTTTATGCCTCTTGTCGAACGACGGTCGGGAGCTCCATAAACTGAC TCCGACTGTGGAAGACGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSNETTLTRAQLDALLKNVFALQIPVIEKFMTDLFKQYVSTASTFKQDMDTMKATDWHKHFFGQKVMPHLFIENLGFGAS FRHQGQEKVVSIPENMTVVKPDSDSQIKEILENLDQTLASMDGVKNKGLVKKFYKETLELICQLGSRTGMMDDFYDKVKG SLTTS
Sequences:
>Translated_165_residues MSNETTLTRAQLDALLKNVFALQIPVIEKFMTDLFKQYVSTASTFKQDMDTMKATDWHKHFFGQKVMPHLFIENLGFGAS FRHQGQEKVVSIPENMTVVKPDSDSQIKEILENLDQTLASMDGVKNKGLVKKFYKETLELICQLGSRTGMMDDFYDKVKG SLTTS >Mature_164_residues SNETTLTRAQLDALLKNVFALQIPVIEKFMTDLFKQYVSTASTFKQDMDTMKATDWHKHFFGQKVMPHLFIENLGFGASF RHQGQEKVVSIPENMTVVKPDSDSQIKEILENLDQTLASMDGVKNKGLVKKFYKETLELICQLGSRTGMMDDFYDKVKGS LTTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18768; Mature: 18637
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNETTLTRAQLDALLKNVFALQIPVIEKFMTDLFKQYVSTASTFKQDMDTMKATDWHKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFGQKVMPHLFIENLGFGASFRHQGQEKVVSIPENMTVVKPDSDSQIKEILENLDQTLAS HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHH MDGVKNKGLVKKFYKETLELICQLGSRTGMMDDFYDKVKGSLTTS HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SNETTLTRAQLDALLKNVFALQIPVIEKFMTDLFKQYVSTASTFKQDMDTMKATDWHKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFGQKVMPHLFIENLGFGASFRHQGQEKVVSIPENMTVVKPDSDSQIKEILENLDQTLAS HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHH MDGVKNKGLVKKFYKETLELICQLGSRTGMMDDFYDKVKGSLTTS HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA