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The map label for this gene is trg [C]

Identifier: 229916646

GI number: 229916646

Start: 870233

End: 871525

Strand: Reverse

Name: trg [C]

Synonym: EAT1b_0918

Alternate gene names: 229916646

Gene position: 871525-870233 (Counterclockwise)

Preceding gene: 229916647

Following gene: 229916645

Centisome position: 29.05

GC content: 52.44

Gene sequence:

>1293_bases
GTGAAAGTATTTAAAAACTTTACGACGCAATTGCTCGCGTGGATTTTGGTCACGTCCTTTATCACGGGCGGAGCGGTCGG
CTACATCACCCTATTACTCTTGACGGAACTCGAGATGGATCAAGGTCAGGTCATGCTCGTCGGTACGGTCGTGGCATTAC
TCATCTCATCACTCGGCGGAATCGTCATTTACTTGATTGCCCGTCGCCCATTGAAAGCGGTCGAGATGGCTTCTGAAAAA
GCAGTCGAAGTCGGGAATGGGGACTTGACGGTACACTTCGCCGACGAGAAGACGACGGATCGTTCAGAGATGGGACGTTT
GCTCTTGTCGATGGACAACATGGTCGAACACCTTCGGGAACAAGGCACGAACATGCGTTACACGGCGGACCAATTGACGG
GTTCGGCACAAGAAATCGCAGCAGCGGTCCAAGAAGGGAATGTTGCAGGCGAAAACATTCGTGTGGCAATGGATTCCCTC
AACAAGATGTTAGAAGATAACGTCAGTGCGACGTATAACTCGATGGACTTGCTTGGAGCGGTCGCGCGTACGATGGAAAG
TATCCGTCAAGAGATGTCATCGGCGCTTGATTCGGCGAGCGAGATGCAACAGGAAGCAGAGAGCGGGAAAGGCCTTGCCT
CGTCTTCCGTCAATGCGATGCATGCGATTGCCGGGAAAGTCGAACAGTCATCGACGCTCAACAGCCAGTTGACGGAAATG
ACAGGCGAGATCTCACGGATCACGGATGTCATCAGTGACATTTCGGCACAGACGAACTTGCTTGCCTTGAACGCATCGAT
TGAAGCGGCACGTGCCGGAGAGCATGGGCGTGGATTCGCTGTCGTTGCGGCAGAAGTGAAAAAGCTCGCGGAACAAACAG
CGAACTCGACGCAAGAAATCACGGACCTCATCGTCGACGTGAAACGTCTCGTTGGCGATACGTCGTCTTCAATGGCGAAC
GTCAAAGCGGAAGTGGAGACAGGCGTCGGGTTAGTTGAAAAAGCGGGTGGTGCTTTCGCATCGATCCATAACTCAGCAAA
TGAAGTATACAGTCATGTCCATTCGGTCGATTCACTCCTCGATGAGTCACGAGGTCAGATCGATTCGGTCGTGACAAACT
CGGCGGGGATTGTCGGAATGGTCGAAGAAGCATCGCGTTATGCGAATGAAGTGACGTCAGCGGCGAGCCAGCAAGCGGCT
AGTCTTGGTGAAGTGAACGGAGCGATGTCAGAGCTTGTTCGCGTTGCAGAGAGTTTGCAGAATGAGACGGAACAGATGAA
AGTAGAAGTGTAA

Upstream 100 bases:

>100_bases
TACGTTTTTTCATTGACCAAACGTTCAACTGAAAACGCTATACATTCATTGGAAATCGGACGATATAAGGAGTGATGAAC
ACAATGAGGAGGAACAAACA

Downstream 100 bases:

>100_bases
GAAGGTTGAAAACGTCCCAATGATGGGGCGTTTTTCATTACATAAATATAAAATTTGAAGAAATCATAAAAAAAGTTGTA
AAAAGACTAAACTGACGAGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKVFKNFTTQLLAWILVTSFITGGAVGYITLLLLTELEMDQGQVMLVGTVVALLISSLGGIVIYLIARRPLKAVEMASEK
AVEVGNGDLTVHFADEKTTDRSEMGRLLLSMDNMVEHLREQGTNMRYTADQLTGSAQEIAAAVQEGNVAGENIRVAMDSL
NKMLEDNVSATYNSMDLLGAVARTMESIRQEMSSALDSASEMQQEAESGKGLASSSVNAMHAIAGKVEQSSTLNSQLTEM
TGEISRITDVISDISAQTNLLALNASIEAARAGEHGRGFAVVAAEVKKLAEQTANSTQEITDLIVDVKRLVGDTSSSMAN
VKAEVETGVGLVEKAGGAFASIHNSANEVYSHVHSVDSLLDESRGQIDSVVTNSAGIVGMVEEASRYANEVTSAASQQAA
SLGEVNGAMSELVRVAESLQNETEQMKVEV

Sequences:

>Translated_430_residues
MKVFKNFTTQLLAWILVTSFITGGAVGYITLLLLTELEMDQGQVMLVGTVVALLISSLGGIVIYLIARRPLKAVEMASEK
AVEVGNGDLTVHFADEKTTDRSEMGRLLLSMDNMVEHLREQGTNMRYTADQLTGSAQEIAAAVQEGNVAGENIRVAMDSL
NKMLEDNVSATYNSMDLLGAVARTMESIRQEMSSALDSASEMQQEAESGKGLASSSVNAMHAIAGKVEQSSTLNSQLTEM
TGEISRITDVISDISAQTNLLALNASIEAARAGEHGRGFAVVAAEVKKLAEQTANSTQEITDLIVDVKRLVGDTSSSMAN
VKAEVETGVGLVEKAGGAFASIHNSANEVYSHVHSVDSLLDESRGQIDSVVTNSAGIVGMVEEASRYANEVTSAASQQAA
SLGEVNGAMSELVRVAESLQNETEQMKVEV
>Mature_430_residues
MKVFKNFTTQLLAWILVTSFITGGAVGYITLLLLTELEMDQGQVMLVGTVVALLISSLGGIVIYLIARRPLKAVEMASEK
AVEVGNGDLTVHFADEKTTDRSEMGRLLLSMDNMVEHLREQGTNMRYTADQLTGSAQEIAAAVQEGNVAGENIRVAMDSL
NKMLEDNVSATYNSMDLLGAVARTMESIRQEMSSALDSASEMQQEAESGKGLASSSVNAMHAIAGKVEQSSTLNSQLTEM
TGEISRITDVISDISAQTNLLALNASIEAARAGEHGRGFAVVAAEVKKLAEQTANSTQEITDLIVDVKRLVGDTSSSMAN
VKAEVETGVGLVEKAGGAFASIHNSANEVYSHVHSVDSLLDESRGQIDSVVTNSAGIVGMVEEASRYANEVTSAASQQAA
SLGEVNGAMSELVRVAESLQNETEQMKVEV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=273, Percent_Identity=32.6007326007326, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788195, Length=294, Percent_Identity=35.3741496598639, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI2367378, Length=335, Percent_Identity=33.134328358209, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789453, Length=125, Percent_Identity=37.6, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788194, Length=129, Percent_Identity=41.8604651162791, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 45614; Mature: 45614

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFKNFTTQLLAWILVTSFITGGAVGYITLLLLTELEMDQGQVMLVGTVVALLISSLGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
IVIYLIARRPLKAVEMASEKAVEVGNGDLTVHFADEKTTDRSEMGRLLLSMDNMVEHLRE
HHHHHHHCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
QGTNMRYTADQLTGSAQEIAAAVQEGNVAGENIRVAMDSLNKMLEDNVSATYNSMDLLGA
CCCCCEEEHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
VARTMESIRQEMSSALDSASEMQQEAESGKGLASSSVNAMHAIAGKVEQSSTLNSQLTEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGEISRITDVISDISAQTNLLALNASIEAARAGEHGRGFAVVAAEVKKLAEQTANSTQEI
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
TDLIVDVKRLVGDTSSSMANVKAEVETGVGLVEKAGGAFASIHNSANEVYSHVHSVDSLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DESRGQIDSVVTNSAGIVGMVEEASRYANEVTSAASQQAASLGEVNGAMSELVRVAESLQ
HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETEQMKVEV
HHHHHHEECC
>Mature Secondary Structure
MKVFKNFTTQLLAWILVTSFITGGAVGYITLLLLTELEMDQGQVMLVGTVVALLISSLGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
IVIYLIARRPLKAVEMASEKAVEVGNGDLTVHFADEKTTDRSEMGRLLLSMDNMVEHLRE
HHHHHHHCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
QGTNMRYTADQLTGSAQEIAAAVQEGNVAGENIRVAMDSLNKMLEDNVSATYNSMDLLGA
CCCCCEEEHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
VARTMESIRQEMSSALDSASEMQQEAESGKGLASSSVNAMHAIAGKVEQSSTLNSQLTEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGEISRITDVISDISAQTNLLALNASIEAARAGEHGRGFAVVAAEVKKLAEQTANSTQEI
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
TDLIVDVKRLVGDTSSSMANVKAEVETGVGLVEKAGGAFASIHNSANEVYSHVHSVDSLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DESRGQIDSVVTNSAGIVGMVEEASRYANEVTSAASQQAASLGEVNGAMSELVRVAESLQ
HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETEQMKVEV
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA