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The map label for this gene is fliD [H]

Identifier: 229916642

GI number: 229916642

Start: 865722

End: 867371

Strand: Reverse

Name: fliD [H]

Synonym: EAT1b_0914

Alternate gene names: 229916642

Gene position: 867371-865722 (Counterclockwise)

Preceding gene: 229916643

Following gene: 229916641

Centisome position: 28.91

GC content: 45.09

Gene sequence:

>1650_bases
ATGACATCACCAATTCGATTTGGCGGATTAGCCAGTGGGATCGATACTGATAGTATCATTAAACAAATGATGCAAGCAGA
GCGAGTTCCAGTAGATCGTTTAGAACAGAAAAAGCAATTGACCGAATGGCGGCGTGACTCTTATCGTGAGGTCAACCGTT
CACTGTTAGCATTACGAAACAGTGCGGTCGATATGATGTTCAGTCGAAACTATTACGCTAAAACGGCTTCATCCTCTGAT
GAATCGCGTGTATCTGTCGTTGCAGGTCCATCAAGTGGAAATGCTTCGCTTACTATCAATTCAGCGACGTTGGCTACCTC
GGCGTCTCATGTGGCGGTGGCAAATGGTGGAGGCATCACAAATGACACGGCAGTGTCGACACTTGGGTTAGAAGTCGGCA
TTCGGAAACAAACGATAACTGCGGGAACAACTGAACTAACAGTGAAGCCGTTACCGAATAATCCACCAACTTTTACGGAT
AAAGATGGTAATGCGATTACGTTAGCTCATACGTACGATGCGGCAACCGGGAAGATTACGTTCGATAGTGGCGTGACAAT
CCCTGAAGGTGCACAAGTCGTATATGAAGCCGGTTATCAAGTTCGTTTCCGTAACGAAGACGGTGGAGCTTTACAGACAG
TTTACGTTGATGAGAATGCTAAGTTTAAAGATCTCGTCACCGCGTTGAATGGCACGAAGACGGGGATTAGTGCGTTCTTT
GATGAAACTTCTGGAAAGATTTCATTAACTCGTAAAAATACAGGTGAACAATCAATCATCGAATTTGAAGGTACTGCAGC
TAAAGCACTATTTGGTTTAAATGGATTCGTAGCCGGGACGAATGCATCTGTGGATGTGAATGGCATTACGTTGACCCAAA
GTTCAAACACATTCACGATTGATAATATGACCATTACATTGAAGTCCTCGTTCAATGATGGTACAAAAGTAAACTTGTCC
GCTGCGACAGACACTCAAAAAATCTTTGACAACATCAAAGGCTTCGTCGATAAATACAATGAGACGATTGATCTCATGAA
CAAGAAGACACGCGAAGAACGATTCCGTTCGTTCGCACCGCTCACGCAGGCACAACGTGATGAGTTGTCTGAAGACGAGA
TCAAGAAGTGGGAAGAGAAGGCGATGAGCGGGATGCTCCGGGGTGATACCATTCTTCGCGGGACGATGGACACGCTTCGT
AGCAAATGGTCAGGCGCAACATCGAGCACAAACGATTTAGACATGTCTCGCTTGTTCCAAATCGGCATTTCAACCGGTTC
GGATTTCACCAATGGTGGTAAAATTGAACTTAATGAAGAGAAACTAAAAGCGGCTATTGAAAAAGATCCGGAGCAAGTAT
ATCAGTTGTTTACAGATGCCGAAACTGGATTATTGCCACAAATCCGAGATGCTGCCAAAGATTCGCGCGATACGATTACA
CGAATTGCTGGAGCGGAAGGTTCTGGCGCACAAACCCATTCGATGGGGAAAGAAATGACCGATATTGATTCGCGTATCAA
ACGGTTAAATGATTTACTCATCGATAAAGAAAACGCCTATTACCGTCGTTTCACAGCGATGGAAACGGCGATGAACCAAG
CGAATGCTCAAGCGGCATCGCTGTCACAGTTTTTAGGCGGCGGAATGTAA

Upstream 100 bases:

>100_bases
AATCCGTGAAATCCCAAGTAAAAAATCAATGGATTTCTTTGCGGCTTTCATGGAGTTTAATCATTTATTCGACGAGCGGA
TATAAAAAAGGAGTGGGCAT

Downstream 100 bases:

>100_bases
GAGGAGGAACTTAAATGGTAGCTAATCCATATGCAGCTTATCAAAACAATGCGGTCACGACCGCGAACCCACAGGAACTG
ACGCTTATGCTTTATGACGG

Product: flagellar hook-associated 2 domain protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MTSPIRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRNSAVDMMFSRNYYAKTASSSD
ESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGITNDTAVSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTD
KDGNAITLAHTYDAATGKITFDSGVTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFF
DETSGKISLTRKNTGEQSIIEFEGTAAKALFGLNGFVAGTNASVDVNGITLTQSSNTFTIDNMTITLKSSFNDGTKVNLS
AATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAPLTQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLR
SKWSGATSSTNDLDMSRLFQIGISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFTDAETGLLPQIRDAAKDSRDTIT
RIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAASLSQFLGGGM

Sequences:

>Translated_549_residues
MTSPIRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRNSAVDMMFSRNYYAKTASSSD
ESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGITNDTAVSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTD
KDGNAITLAHTYDAATGKITFDSGVTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFF
DETSGKISLTRKNTGEQSIIEFEGTAAKALFGLNGFVAGTNASVDVNGITLTQSSNTFTIDNMTITLKSSFNDGTKVNLS
AATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAPLTQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLR
SKWSGATSSTNDLDMSRLFQIGISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFTDAETGLLPQIRDAAKDSRDTIT
RIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAASLSQFLGGGM
>Mature_548_residues
TSPIRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRNSAVDMMFSRNYYAKTASSSDE
SRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGITNDTAVSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTDK
DGNAITLAHTYDAATGKITFDSGVTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFFD
ETSGKISLTRKNTGEQSIIEFEGTAAKALFGLNGFVAGTNASVDVNGITLTQSSNTFTIDNMTITLKSSFNDGTKVNLSA
ATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAPLTQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLRS
KWSGATSSTNDLDMSRLFQIGISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFTDAETGLLPQIRDAAKDSRDTITR
IAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAASLSQFLGGGM

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=364, Percent_Identity=27.7472527472527, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 59611; Mature: 59480

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPIRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRN
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVDMMFSRNYYAKTASSSDESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGIT
HHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEECCEEECCCCEEEEECCCCCC
NDTAVSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTDKDGNAITLAHTYDAATGKIT
CCCHHHEECCEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEE
FDSGVTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFF
ECCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
DETSGKISLTRKNTGEQSIIEFEGTAAKALFGLNGFVAGTNASVDVNGITLTQSSNTFTI
CCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEE
DNMTITLKSSFNDGTKVNLSAATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAP
EEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLRSKWSGATSSTNDLDMSRLFQ
HHHHHHHCCCHHHHHHHHHHHHHCHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHH
IGISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFTDAETGLLPQIRDAAKDSRDTIT
HHCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH
RIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAAS
HHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSQFLGGGM
HHHHHCCCC
>Mature Secondary Structure 
TSPIRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRN
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVDMMFSRNYYAKTASSSDESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGIT
HHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEECCEEECCCCEEEEECCCCCC
NDTAVSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTDKDGNAITLAHTYDAATGKIT
CCCHHHEECCEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEE
FDSGVTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFF
ECCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
DETSGKISLTRKNTGEQSIIEFEGTAAKALFGLNGFVAGTNASVDVNGITLTQSSNTFTI
CCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEE
DNMTITLKSSFNDGTKVNLSAATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAP
EEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLRSKWSGATSSTNDLDMSRLFQ
HHHHHHHCCCHHHHHHHHHHHHHCHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHH
IGISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFTDAETGLLPQIRDAAKDSRDTIT
HHCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH
RIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAAS
HHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSQFLGGGM
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]