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The map label for this gene is cccA [H]

Identifier: 229916621

GI number: 229916621

Start: 848822

End: 849157

Strand: Reverse

Name: cccA [H]

Synonym: EAT1b_0893

Alternate gene names: 229916621

Gene position: 849157-848822 (Counterclockwise)

Preceding gene: 229916622

Following gene: 229916620

Centisome position: 28.31

GC content: 55.36

Gene sequence:

>336_bases
ATGAAAAAATGGATGATGGCCATCGGCCTCGGCGCCATGCTGACACTCGGCGCATGTGGCGGCGGTGAAGAAGAGGACAC
GTCGAGCAACGGGGATTCGGGCTCGAACACGGCATCGGTTGACGCGGAAGCGGTATACGCACAAAACTGTGCGGCATGTC
ACGGTGCGAATCTTGAAGGAATGAGTGGTCCGTCACTCGAGCAAGTCGGTGCTCGTCTGTCGGCAGAAGAGATTGAAAAC
GTCATTCGAAACGGTCAAGGCGCGATGCCTGCGAACGTCCTCGAAGATGATGAAGAAATCACAGCGGTCGCTGCTTGGCT
CGCTGAGAAAAAATAA

Upstream 100 bases:

>100_bases
ATCTTTGTGTACTTTTCGTGAGATTAGGTTAGAAAGCATACGTTAACGGCTATAATGGTAAATGTAGGTCATTTCTACAA
CTTAGGAGGGGAACGTGGTT

Downstream 100 bases:

>100_bases
GACAGAGAAGCATGAGGTGGAGTATACCTCATGCTTTTTTTATAGTCCCTTTGATTGAAATGAGGTTATACAATAAATCT
TGTACCGATAAAATAGGTTA

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c551 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKKWMMAIGLGAMLTLGACGGGEEEDTSSNGDSGSNTASVDAEAVYAQNCAACHGANLEGMSGPSLEQVGARLSAEEIEN
VIRNGQGAMPANVLEDDEEITAVAAWLAEKK

Sequences:

>Translated_111_residues
MKKWMMAIGLGAMLTLGACGGGEEEDTSSNGDSGSNTASVDAEAVYAQNCAACHGANLEGMSGPSLEQVGARLSAEEIEN
VIRNGQGAMPANVLEDDEEITAVAAWLAEKK
>Mature_111_residues
MKKWMMAIGLGAMLTLGACGGGEEEDTSSNGDSGSNTASVDAEAVYAQNCAACHGANLEGMSGPSLEQVGARLSAEEIEN
VIRNGQGAMPANVLEDDEEITAVAAWLAEKK

Specific function: Appears to mediate electron flow from the cytochrome b6f complex to an alternative terminal oxidase [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11376; Mature: 11376

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWMMAIGLGAMLTLGACGGGEEEDTSSNGDSGSNTASVDAEAVYAQNCAACHGANLEG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
MSGPSLEQVGARLSAEEIENVIRNGQGAMPANVLEDDEEITAVAAWLAEKK
CCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWMMAIGLGAMLTLGACGGGEEEDTSSNGDSGSNTASVDAEAVYAQNCAACHGANLEG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
MSGPSLEQVGARLSAEEIENVIRNGQGAMPANVLEDDEEITAVAAWLAEKK
CCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7916623 [H]