Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916599

Identifier: 229916599

GI number: 229916599

Start: 823769

End: 824284

Strand: Reverse

Name: 229916599

Synonym: EAT1b_0871

Alternate gene names: NA

Gene position: 824284-823769 (Counterclockwise)

Preceding gene: 229916600

Following gene: 229916598

Centisome position: 27.48

GC content: 50.58

Gene sequence:

>516_bases
ATGGGTCAAATCTTACTCATCCTACTGCTACAACTAATCTACGTTCCGGTGTTAACGCTCCGGACGATCATGCTCGTGAA
AGGGAAGACCGTCATCGCCGGTCTATTCGGAACGTTAGAAACGCTAATCTATATTTTTGCGCTCGGCATCGTGTTCCAGG
ATCTGACGACGGTCGGGATGATTGTGTATGCGGTCGGCTTCGGGCTCGGAATCTTACTTGGCGGTTTCGTCGAACGAAAA
CTCGCCATCGGTTACAACATGATTCAAGTCCATACGAAAGAATATCCAGCGGAACTCATCCAACAGATGCGTGACAACGG
ATATGGAGTTACGCATTATCAAGGGCAAGGACGTGACGGGGTCCGTTACCGCCTTGACGTATTGGCGGCCCGTACCCGGA
TGAAAGAACTGCGTGAACTCGTCGAGAAGCATGAACCGAAAGCGTTCCTCGTCGCATTTGACCCAATCGACTTCAAAGGC
GGTTATATGATGAAAGGACTGCGTCGCCCGAAATGA

Upstream 100 bases:

>100_bases
TAACTAAGTAAAAGGTTGACTGCGGTCAGCCTTTTTTAGTTGCATCTCTTTCAGAAATTTGGAATAGTGGTGATAATGAA
TTGGAACGGAGGTCGATCAA

Downstream 100 bases:

>100_bases
CGCACAAGACTCACGAAAGTGGGTCTTTTTTTGTTAGAGTAGGGATTTTATCTCGTGATAGGGAACTAGTGAAGAAAGGA
GATGAGACCGTGAAACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERK
LAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKG
GYMMKGLRRPK

Sequences:

>Translated_171_residues
MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERK
LAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKG
GYMMKGLRRPK
>Mature_170_residues
GQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERKL
AIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGG
YMMKGLRRPK

Specific function: Unknown

COG id: COG4843

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0316 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y871_EXISA (C4L5I5)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002885245.1
- GeneID:   7869037
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0871
- OMA:   AFIISYE
- ProtClustDB:   PRK04164
- HAMAP:   MF_01515
- InterPro:   IPR019264
- InterPro:   IPR022930

Pfam domain/function: PF10035 DUF2179

EC number: NA

Molecular weight: Translated: 19280; Mature: 19148

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x24214848)-; HASH(0x2672f49c)-; HASH(0x269431fc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVYAVGFGLGILLGGFVERKLAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDG
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC
VRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGGYMMKGLRRPK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCH
>Mature Secondary Structure 
GQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVYAVGFGLGILLGGFVERKLAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDG
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC
VRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGGYMMKGLRRPK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA