| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916599
Identifier: 229916599
GI number: 229916599
Start: 823769
End: 824284
Strand: Reverse
Name: 229916599
Synonym: EAT1b_0871
Alternate gene names: NA
Gene position: 824284-823769 (Counterclockwise)
Preceding gene: 229916600
Following gene: 229916598
Centisome position: 27.48
GC content: 50.58
Gene sequence:
>516_bases ATGGGTCAAATCTTACTCATCCTACTGCTACAACTAATCTACGTTCCGGTGTTAACGCTCCGGACGATCATGCTCGTGAA AGGGAAGACCGTCATCGCCGGTCTATTCGGAACGTTAGAAACGCTAATCTATATTTTTGCGCTCGGCATCGTGTTCCAGG ATCTGACGACGGTCGGGATGATTGTGTATGCGGTCGGCTTCGGGCTCGGAATCTTACTTGGCGGTTTCGTCGAACGAAAA CTCGCCATCGGTTACAACATGATTCAAGTCCATACGAAAGAATATCCAGCGGAACTCATCCAACAGATGCGTGACAACGG ATATGGAGTTACGCATTATCAAGGGCAAGGACGTGACGGGGTCCGTTACCGCCTTGACGTATTGGCGGCCCGTACCCGGA TGAAAGAACTGCGTGAACTCGTCGAGAAGCATGAACCGAAAGCGTTCCTCGTCGCATTTGACCCAATCGACTTCAAAGGC GGTTATATGATGAAAGGACTGCGTCGCCCGAAATGA
Upstream 100 bases:
>100_bases TAACTAAGTAAAAGGTTGACTGCGGTCAGCCTTTTTTAGTTGCATCTCTTTCAGAAATTTGGAATAGTGGTGATAATGAA TTGGAACGGAGGTCGATCAA
Downstream 100 bases:
>100_bases CGCACAAGACTCACGAAAGTGGGTCTTTTTTTGTTAGAGTAGGGATTTTATCTCGTGATAGGGAACTAGTGAAGAAAGGA GATGAGACCGTGAAACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERK LAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKG GYMMKGLRRPK
Sequences:
>Translated_171_residues MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERK LAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKG GYMMKGLRRPK >Mature_170_residues GQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGMIVYAVGFGLGILLGGFVERKL AIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDGVRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGG YMMKGLRRPK
Specific function: Unknown
COG id: COG4843
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0316 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y871_EXISA (C4L5I5)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002885245.1 - GeneID: 7869037 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0871 - OMA: AFIISYE - ProtClustDB: PRK04164 - HAMAP: MF_01515 - InterPro: IPR019264 - InterPro: IPR022930
Pfam domain/function: PF10035 DUF2179
EC number: NA
Molecular weight: Translated: 19280; Mature: 19148
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x24214848)-; HASH(0x2672f49c)-; HASH(0x269431fc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYAVGFGLGILLGGFVERKLAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDG HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC VRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGGYMMKGLRRPK HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCH >Mature Secondary Structure GQILLILLLQLIYVPVLTLRTIMLVKGKTVIAGLFGTLETLIYIFALGIVFQDLTTVGM CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYAVGFGLGILLGGFVERKLAIGYNMIQVHTKEYPAELIQQMRDNGYGVTHYQGQGRDG HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCC VRYRLDVLAARTRMKELRELVEKHEPKAFLVAFDPIDFKGGYMMKGLRRPK HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA