| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is est [H]
Identifier: 229916581
GI number: 229916581
Start: 806200
End: 806940
Strand: Reverse
Name: est [H]
Synonym: EAT1b_0853
Alternate gene names: 229916581
Gene position: 806940-806200 (Counterclockwise)
Preceding gene: 229916582
Following gene: 229916580
Centisome position: 26.9
GC content: 52.9
Gene sequence:
>741_bases ATGAAAGTGACAGCACCAAAACCGTTCTTCTTCGAGGGCGGACAACGTGCCGTGTTGATGTTACATGGCTTCACTGGATC GAGCGCGGATGTCCGCATGCTCGGTCGCTTCCTTCAAAAAGAAGGATACACATGTATGGGACCGATCTATCGTGGTCATG CCGTCCCACCGGAAGAATTACTCCAATATGGACCGAAAGACTGGTGGGAAGACGTCTTGGACGCCTACCAGACACTCGTC GACAAAGGCCATGAGGAAATCGTCGTCTGCGGACTCTCGCTAGGTGGCGTGATGTCGCTCCGTCTCGCCGAGGAGAAAGA CGTCAAGGCGGTCATCCCGATGTGCGCACCGACGGGAATCGATGCCGAGGACCGCTTGTATAAAGGAGTCCAAGCATATG CCCGAGAATATAAGGGTAGAGAAGAAAAGTCGCCGGAACAGATCGAGCAGGAAATGGCAGAGTTCAAACCGATGCCAACA TTGAAAGACCTCCGTGCCTTCGTCCGCGACACGGCGTCGAAGCTCGAGGACATCTTCGTCCCGACACTCGTCGTCCAAGG CGCCAAAGACAACATGATCGACCCGGAATCGGCGAATCAAATTTACGAGGCGGTCAACACGTTCCAAAAAGAGTTGCTCA TCTATGAGAACTCGGGACACGTGATCACACTCGACAAAGAAAAAGAGAAACTGCACCAGGACGTGCTCGATTTTCTCGAA ACGTTAGACTGGTCAGTCTAA
Upstream 100 bases:
>100_bases ATAAGGCTGATCGTTCTCGATTTTCACGTGAGGCGGTCAGCTTTTGTTTTTTTGATTTATTTTTTGGGAATAATGTAGAT ACGAGGAGATGACAGATCAA
Downstream 100 bases:
>100_bases GAAGGAGGTGTCACGTTGAATTTACGTGACCAATTACTAGAGATCTTGCAGGCGAGCGAAAAACCGCTCTCTGTGGATCA ACTGACCGAGCGACTACAGC
Product: carboxylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKVTAPKPFFFEGGQRAVLMLHGFTGSSADVRMLGRFLQKEGYTCMGPIYRGHAVPPEELLQYGPKDWWEDVLDAYQTLV DKGHEEIVVCGLSLGGVMSLRLAEEKDVKAVIPMCAPTGIDAEDRLYKGVQAYAREYKGREEKSPEQIEQEMAEFKPMPT LKDLRAFVRDTASKLEDIFVPTLVVQGAKDNMIDPESANQIYEAVNTFQKELLIYENSGHVITLDKEKEKLHQDVLDFLE TLDWSV
Sequences:
>Translated_246_residues MKVTAPKPFFFEGGQRAVLMLHGFTGSSADVRMLGRFLQKEGYTCMGPIYRGHAVPPEELLQYGPKDWWEDVLDAYQTLV DKGHEEIVVCGLSLGGVMSLRLAEEKDVKAVIPMCAPTGIDAEDRLYKGVQAYAREYKGREEKSPEQIEQEMAEFKPMPT LKDLRAFVRDTASKLEDIFVPTLVVQGAKDNMIDPESANQIYEAVNTFQKELLIYENSGHVITLDKEKEKLHQDVLDFLE TLDWSV >Mature_246_residues MKVTAPKPFFFEGGQRAVLMLHGFTGSSADVRMLGRFLQKEGYTCMGPIYRGHAVPPEELLQYGPKDWWEDVLDAYQTLV DKGHEEIVVCGLSLGGVMSLRLAEEKDVKAVIPMCAPTGIDAEDRLYKGVQAYAREYKGREEKSPEQIEQEMAEFKPMPT LKDLRAFVRDTASKLEDIFVPTLVVQGAKDNMIDPESANQIYEAVNTFQKELLIYENSGHVITLDKEKEKLHQDVLDFLE TLDWSV
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 27836; Mature: 27836
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTAPKPFFFEGGQRAVLMLHGFTGSSADVRMLGRFLQKEGYTCMGPIYRGHAVPPEEL CCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHH LQYGPKDWWEDVLDAYQTLVDKGHEEIVVCGLSLGGVMSLRLAEEKDVKAVIPMCAPTGI HHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHEECCCCCCCC DAEDRLYKGVQAYAREYKGREEKSPEQIEQEMAEFKPMPTLKDLRAFVRDTASKLEDIFV CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH PTLVVQGAKDNMIDPESANQIYEAVNTFQKELLIYENSGHVITLDKEKEKLHQDVLDFLE HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHH TLDWSV HHCCCC >Mature Secondary Structure MKVTAPKPFFFEGGQRAVLMLHGFTGSSADVRMLGRFLQKEGYTCMGPIYRGHAVPPEEL CCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHH LQYGPKDWWEDVLDAYQTLVDKGHEEIVVCGLSLGGVMSLRLAEEKDVKAVIPMCAPTGI HHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHEECCCCCCCC DAEDRLYKGVQAYAREYKGREEKSPEQIEQEMAEFKPMPTLKDLRAFVRDTASKLEDIFV CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH PTLVVQGAKDNMIDPESANQIYEAVNTFQKELLIYENSGHVITLDKEKEKLHQDVLDFLE HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHH TLDWSV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]