| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916562
Identifier: 229916562
GI number: 229916562
Start: 791280
End: 792059
Strand: Reverse
Name: 229916562
Synonym: EAT1b_0833
Alternate gene names: NA
Gene position: 792059-791280 (Counterclockwise)
Preceding gene: 229916563
Following gene: 229916561
Centisome position: 26.4
GC content: 41.92
Gene sequence:
>780_bases ATGAAGCAGCTTATTCGACGTGAATTCACTAATTTATGGACACCTCGTTCTCTCATGGTATACATCGGTATCATTTTCAT CGTGCCGTTCGTGCAATTTATGACCATTCGGGATCGGTATGAGTTCTTTGACCCGATCGAGGTGTTTGAAGAAAGTGTAT CTACCATTCCTGCCATGCTGTTTCCGGTGCTAGCCATCTTAATCTTTTTGCCAAATATCTTGGCTGAATATCGGCACAAT TTTTTGACGTATACACGAACACGTATCGATTTATCTGTGTATCTGGTTGCGAAAGGTTTGGTTAATGCGATTTTGAGCGG AATCGTACTATTCTCCATGATTTTCATGACGTTTTTATTTGTCATGTACGTGGAACCTCTATTCCATTTAGTTGAGTACA CCGCTGTGACAGACGGAGTAGTGATCCCGACTACGACGTTTTCCTTTTTGCAAGAGATTCATCCGATGCTCTATGGATTC TCTTATGCTGTTTGGATTGGTGTGAACGGGTCGTTGTATGCGACGATGGCGTATCTGTTGATTTTGACACTCGACAACTT ATTTGTAGCCATCTCTATCCCATTTTTGGCATACCATATTCTTAATTTTGTGGCAGGGATTTTTCAGGTTCCGAAATTCT CGCCACTTAGCACACTATTTCCGTTTAATATTACGGCACAACCGATTTGGACAATTTTCGTGCCATTCCTTCTTTTTCTC TCCATTGGTGTCGGCATCTATTTATTCCATCTACGGTCACGCCGGGAGTGGAGTTTTTGA
Upstream 100 bases:
>100_bases ACGATTGAACGTGTGGAGTCTCGCGCTTTTATTGTTATTGAACGTGCTCGGTTATTGGATGGCCAATCAATTGGTCTCCA CGGAAAAGGAGGACTAACGA
Downstream 100 bases:
>100_bases GGAGGAGAAGTGATGGTCGTTGATCGATTGATGAATGAATTTACAAAAAGGAGTTGGCTCTTTGTTGGGGTCATCATCTT TCTCTATAGTTTGAGGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKQLIRREFTNLWTPRSLMVYIGIIFIVPFVQFMTIRDRYEFFDPIEVFEESVSTIPAMLFPVLAILIFLPNILAEYRHN FLTYTRTRIDLSVYLVAKGLVNAILSGIVLFSMIFMTFLFVMYVEPLFHLVEYTAVTDGVVIPTTTFSFLQEIHPMLYGF SYAVWIGVNGSLYATMAYLLILTLDNLFVAISIPFLAYHILNFVAGIFQVPKFSPLSTLFPFNITAQPIWTIFVPFLLFL SIGVGIYLFHLRSRREWSF
Sequences:
>Translated_259_residues MKQLIRREFTNLWTPRSLMVYIGIIFIVPFVQFMTIRDRYEFFDPIEVFEESVSTIPAMLFPVLAILIFLPNILAEYRHN FLTYTRTRIDLSVYLVAKGLVNAILSGIVLFSMIFMTFLFVMYVEPLFHLVEYTAVTDGVVIPTTTFSFLQEIHPMLYGF SYAVWIGVNGSLYATMAYLLILTLDNLFVAISIPFLAYHILNFVAGIFQVPKFSPLSTLFPFNITAQPIWTIFVPFLLFL SIGVGIYLFHLRSRREWSF >Mature_259_residues MKQLIRREFTNLWTPRSLMVYIGIIFIVPFVQFMTIRDRYEFFDPIEVFEESVSTIPAMLFPVLAILIFLPNILAEYRHN FLTYTRTRIDLSVYLVAKGLVNAILSGIVLFSMIFMTFLFVMYVEPLFHLVEYTAVTDGVVIPTTTFSFLQEIHPMLYGF SYAVWIGVNGSLYATMAYLLILTLDNLFVAISIPFLAYHILNFVAGIFQVPKFSPLSTLFPFNITAQPIWTIFVPFLLFL SIGVGIYLFHLRSRREWSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30062; Mature: 30062
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLIRREFTNLWTPRSLMVYIGIIFIVPFVQFMTIRDRYEFFDPIEVFEESVSTIPAML CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FPVLAILIFLPNILAEYRHNFLTYTRTRIDLSVYLVAKGLVNAILSGIVLFSMIFMTFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMYVEPLFHLVEYTAVTDGVVIPTTTFSFLQEIHPMLYGFSYAVWIGVNGSLYATMAYLL HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH ILTLDNLFVAISIPFLAYHILNFVAGIFQVPKFSPLSTLFPFNITAQPIWTIFVPFLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH SIGVGIYLFHLRSRREWSF HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQLIRREFTNLWTPRSLMVYIGIIFIVPFVQFMTIRDRYEFFDPIEVFEESVSTIPAML CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FPVLAILIFLPNILAEYRHNFLTYTRTRIDLSVYLVAKGLVNAILSGIVLFSMIFMTFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMYVEPLFHLVEYTAVTDGVVIPTTTFSFLQEIHPMLYGFSYAVWIGVNGSLYATMAYLL HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH ILTLDNLFVAISIPFLAYHILNFVAGIFQVPKFSPLSTLFPFNITAQPIWTIFVPFLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH SIGVGIYLFHLRSRREWSF HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA