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The map label for this gene is gcvH [H]

Identifier: 229916541

GI number: 229916541

Start: 765968

End: 766351

Strand: Reverse

Name: gcvH [H]

Synonym: EAT1b_0812

Alternate gene names: 229916541

Gene position: 766351-765968 (Counterclockwise)

Preceding gene: 229916542

Following gene: 229916539

Centisome position: 25.55

GC content: 48.18

Gene sequence:

>384_bases
ATGAGCAAAGTACCAGCAAATTTACGTTATTCAAAAGAACATGAGTGGGTAGAAGTAAACGGAACGAAAGCCCGCATCGG
CATCACGGATTTCGCACAAAGCGAACTAGGGGATATCGTGTTTGTCGAACTCCCAGAAGTCGATGGTACGATTTTGCTCG
ACGAGCCATTCGGTTCAGTCGAATCAGTGAAGACGGTCTCTGAGTTGTATGCGCCAGTATCAGGTCGCATCACAGCAGTG
AACGAGGACCTCGCGGATTCTCCAGAACTCGTCAACGAGTCACCGTTTGAAAACGCATGGATGATCGAAGTCGAGTTGAC
GGAAGAGTCAGACCTCGACAAGCTCATGTCTGCAGAAGAATACGAAGCGATGATTCAAGGATAA

Upstream 100 bases:

>100_bases
AAAAACGACCGTCGGATTTTCAGAAAAGTCCTTTACGGACGTTTGGGGCTAAGTGCTATAATACAGATGTGAGTCTAATT
TATTTGAGGGGGAAGTTAGG

Downstream 100 bases:

>100_bases
TCAAAACCGGCCTCTCCAATGGAGAAGCCGGCTTTTTTTTACTCGAAATCGAGTCGGTAATGATCGGATTTGACGAGAGT
CGCCCGTTCAAACACGCGAT

Product: glycine cleavage system H protein

Products: Proton; NADH; NH3; CO2; 5,10-methylene-THF [C]

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSKVPANLRYSKEHEWVEVNGTKARIGITDFAQSELGDIVFVELPEVDGTILLDEPFGSVESVKTVSELYAPVSGRITAV
NEDLADSPELVNESPFENAWMIEVELTEESDLDKLMSAEEYEAMIQG

Sequences:

>Translated_127_residues
MSKVPANLRYSKEHEWVEVNGTKARIGITDFAQSELGDIVFVELPEVDGTILLDEPFGSVESVKTVSELYAPVSGRITAV
NEDLADSPELVNESPFENAWMIEVELTEESDLDKLMSAEEYEAMIQG
>Mature_126_residues
SKVPANLRYSKEHEWVEVNGTKARIGITDFAQSELGDIVFVELPEVDGTILLDEPFGSVESVKTVSELYAPVSGRITAVN
EDLADSPELVNESPFENAWMIEVELTEESDLDKLMSAEEYEAMIQG

Specific function: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein [H]

COG id: COG0509

COG function: function code E; Glycine cleavage system H protein (lipoate-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 lipoyl-binding domain [H]

Homologues:

Organism=Homo sapiens, GI49574537, Length=118, Percent_Identity=45.7627118644068, Blast_Score=119, Evalue=7e-28,
Organism=Homo sapiens, GI89057342, Length=118, Percent_Identity=45.7627118644068, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789271, Length=128, Percent_Identity=50.78125, Blast_Score=130, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17551294, Length=112, Percent_Identity=46.4285714285714, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17507493, Length=112, Percent_Identity=43.75, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6319272, Length=128, Percent_Identity=40.625, Blast_Score=104, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17865652, Length=118, Percent_Identity=43.2203389830509, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003016
- InterPro:   IPR002930
- InterPro:   IPR017453
- InterPro:   IPR011053 [H]

Pfam domain/function: PF01597 GCV_H [H]

EC number: NA

Molecular weight: Translated: 14082; Mature: 13951

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVPANLRYSKEHEWVEVNGTKARIGITDFAQSELGDIVFVELPEVDGTILLDEPFGSV
CCCCCCCCEECCCCCEEEECCCEEEEECCHHHHCCCCCEEEEEECCCCCEEEEECCCCCH
ESVKTVSELYAPVSGRITAVNEDLADSPELVNESPFENAWMIEVELTEESDLDKLMSAEE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHCHHH
YEAMIQG
HHHCCCC
>Mature Secondary Structure 
SKVPANLRYSKEHEWVEVNGTKARIGITDFAQSELGDIVFVELPEVDGTILLDEPFGSV
CCCCCCCEECCCCCEEEECCCEEEEECCHHHHCCCCCEEEEEECCCCCEEEEECCCCCH
ESVKTVSELYAPVSGRITAVNEDLADSPELVNESPFENAWMIEVELTEESDLDKLMSAEE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHCHHH
YEAMIQG
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Lipoyl Cofactor. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD; L-glycine; THF [C]

Specific reaction: NAD + L-glycine + THF = Proton + NADH + NH3 + CO2 + 5,10-methylene-THF [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA