| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916506
Identifier: 229916506
GI number: 229916506
Start: 732587
End: 733147
Strand: Direct
Name: 229916506
Synonym: EAT1b_0776
Alternate gene names: NA
Gene position: 732587-733147 (Clockwise)
Preceding gene: 229916505
Following gene: 229916509
Centisome position: 24.42
GC content: 47.77
Gene sequence:
>561_bases ATGACAGACGAACAGGATTTGGTCCATTTTCTAAAACAAGACGCCGAGCTCATAAAGCTTCTCCACGCCGTTGCCAGCCT CGATTTACCGGATTGGTGGATTTGTGCGGGCTATATCCGGGCAAAAGTGTGGGATCATCTTCACGGATACAAAACATCGA CTAAAACGGATGATGTGGATGTGATCTATTTCAATCCGAATCAACTAGATGAAGCCGCCGAGAAAGAACTCGAACAGCGA TTATTCCGTCTCATCCCCGATGTGCCTTGGTCTGTCAAAAACCAAGCGAGGATGCATCATGTGAACCAGTTACCTCCATA TACATCATCGGTCGATGCGTTGGCACATTTTCCTGAGACCGTCACCGCAATCGGGGTGAGACTCGACTCAAATGAGGAGC TCATCCTGGCCGCACCATATGGGATTCAAGATCTTCTCACGCTACAAGTTAGACCCACACCGTACTTTGAAACAAGCACC TCAACACATCCGATCTACTTGCAGCGAATGGCTCAAAAGAACTGGCCAGTCGAGTGGCCAAACGTCAAATTGTATACATA A
Upstream 100 bases:
>100_bases CGAACGTCAGCGCGTACAACTTCAAGCATAATCGATATACGAGCATCTAGGCATTGTCTAGGTGCTTTTTTCAACCAAAT TGTAAGGAGGGTCATTCATT
Downstream 100 bases:
>100_bases TACCCACACAAAAACGCGACCACCGAAGTGATCGCGTTTTCTTATACCGATTAAAGAAGAAGTCCAGCCAATGTAGCTGA CATCAAGTTTGCAAGCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTDEQDLVHFLKQDAELIKLLHAVASLDLPDWWICAGYIRAKVWDHLHGYKTSTKTDDVDVIYFNPNQLDEAAEKELEQR LFRLIPDVPWSVKNQARMHHVNQLPPYTSSVDALAHFPETVTAIGVRLDSNEELILAAPYGIQDLLTLQVRPTPYFETST STHPIYLQRMAQKNWPVEWPNVKLYT
Sequences:
>Translated_186_residues MTDEQDLVHFLKQDAELIKLLHAVASLDLPDWWICAGYIRAKVWDHLHGYKTSTKTDDVDVIYFNPNQLDEAAEKELEQR LFRLIPDVPWSVKNQARMHHVNQLPPYTSSVDALAHFPETVTAIGVRLDSNEELILAAPYGIQDLLTLQVRPTPYFETST STHPIYLQRMAQKNWPVEWPNVKLYT >Mature_185_residues TDEQDLVHFLKQDAELIKLLHAVASLDLPDWWICAGYIRAKVWDHLHGYKTSTKTDDVDVIYFNPNQLDEAAEKELEQRL FRLIPDVPWSVKNQARMHHVNQLPPYTSSVDALAHFPETVTAIGVRLDSNEELILAAPYGIQDLLTLQVRPTPYFETSTS THPIYLQRMAQKNWPVEWPNVKLYT
Specific function: Unknown
COG id: COG3575
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21522; Mature: 21390
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEQDLVHFLKQDAELIKLLHAVASLDLPDWWICAGYIRAKVWDHLHGYKTSTKTDDVD CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE VIYFNPNQLDEAAEKELEQRLFRLIPDVPWSVKNQARMHHVNQLPPYTSSVDALAHFPET EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHH VTAIGVRLDSNEELILAAPYGIQDLLTLQVRPTPYFETSTSTHPIYLQRMAQKNWPVEWP HHHEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCC NVKLYT CEEEEC >Mature Secondary Structure TDEQDLVHFLKQDAELIKLLHAVASLDLPDWWICAGYIRAKVWDHLHGYKTSTKTDDVD CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE VIYFNPNQLDEAAEKELEQRLFRLIPDVPWSVKNQARMHHVNQLPPYTSSVDALAHFPET EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHH VTAIGVRLDSNEELILAAPYGIQDLLTLQVRPTPYFETSTSTHPIYLQRMAQKNWPVEWP HHHEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCC NVKLYT CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA