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The map label for this gene is ycjS [H]

Identifier: 229916478

GI number: 229916478

Start: 702457

End: 703449

Strand: Reverse

Name: ycjS [H]

Synonym: EAT1b_0748

Alternate gene names: 229916478

Gene position: 703449-702457 (Counterclockwise)

Preceding gene: 229916479

Following gene: 229916477

Centisome position: 23.45

GC content: 52.97

Gene sequence:

>993_bases
ATGAAGATTGGCATCATCGGAACGGGGGGGATTGCGACGAGTGCCCATATCCCGAATTATGTCAAAGCAGGGATGGATGT
GGTAGCGGTCATGAACCGGACACGGGCAAACGGGGAACGTGTCGCCCGGCAGTTCGGCATCCCGAACGTTTATGAGACGG
TCGAGGAGATGCTCACGTACGAACAGCTCGATGCGGTCAGTATCTGTACACCAAACGCCTTACATAAAGAGCAAGTGCTG
CTTGCGCTTGAAGCAGGATGTCACGTTCTCTGTGAGAAACCACCCGGTATCTCGGAGAATGAGGCAATTGAGATGTTAAA
AGCGGCAAAACGAGCCGGAAAAACATTGCAATACGGATTCCATTACCGACATCGTGCAGATACGGTTCTGTTGAAGCGAA
TGATTGACGCGGGAGAACTTGGAGATATCTATGCAGCGACGGCGTTCGCCCTTCGGCGACGTGGAATTCCGGGATGGGGA
GTCTTCACGAATAAAGAACTGCAAGGCGGGGGCGCCCTGCTCGACATCGGTGTGCATATGTTAGACCTAGCGCTTCATTT
GATGGGATACCCGAAACCGAGAGAGGTCGTTGGGCACGTCGGTCAATACTTAGGGAATCGTCCTGGTGTCGGTTTGTTAG
GGGAATGGGACGCGAGTTCGCTTTCGGTCGAGGATACGGCGAGGGCGATGATCACGTTTGAAAATGGGGCATCCTTATTA
CTCGACGTCAGCTATATGGCCAATATCGAAGAGAAAGATACGATGCGTGTGGAATGTCGCGGCACGAACGCCGGAGCCAG
TCTGTTCCCGCTCACGCTCCACACGGAGAAATATGGGGCATTGTTTGACGAGCGACCAACTTATTTGACTGAACACGACC
CGTATGAGCGGCAAATCCAACGCTTCCTTGAGGCTTGTCGAGAAGACCCGAACTATCGTCAAGCGGAGGAAGCGGTCATC
TTGCATCGGATCATCGATCGCATCTACGCATAA

Upstream 100 bases:

>100_bases
GTGTTTCAAGGTGGCCCGTTCCAAACGGGTCACCTTTTTTTGTTTTACAGGAATCGGTGGGACGTATGACGAAACTGTAA
ACCGAATAGGAGGAGATCAT

Downstream 100 bases:

>100_bases
GCACGATACTTTTCATTCCGTAAAAACAGGGTATATAGTGTAGGTGTTACATATTTCTATGAGGAGGATGACTTATGCAC
AACTTTGAATACAAAAACCC

Product: oxidoreductase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKIGIIGTGGIATSAHIPNYVKAGMDVVAVMNRTRANGERVARQFGIPNVYETVEEMLTYEQLDAVSICTPNALHKEQVL
LALEAGCHVLCEKPPGISENEAIEMLKAAKRAGKTLQYGFHYRHRADTVLLKRMIDAGELGDIYAATAFALRRRGIPGWG
VFTNKELQGGGALLDIGVHMLDLALHLMGYPKPREVVGHVGQYLGNRPGVGLLGEWDASSLSVEDTARAMITFENGASLL
LDVSYMANIEEKDTMRVECRGTNAGASLFPLTLHTEKYGALFDERPTYLTEHDPYERQIQRFLEACREDPNYRQAEEAVI
LHRIIDRIYA

Sequences:

>Translated_330_residues
MKIGIIGTGGIATSAHIPNYVKAGMDVVAVMNRTRANGERVARQFGIPNVYETVEEMLTYEQLDAVSICTPNALHKEQVL
LALEAGCHVLCEKPPGISENEAIEMLKAAKRAGKTLQYGFHYRHRADTVLLKRMIDAGELGDIYAATAFALRRRGIPGWG
VFTNKELQGGGALLDIGVHMLDLALHLMGYPKPREVVGHVGQYLGNRPGVGLLGEWDASSLSVEDTARAMITFENGASLL
LDVSYMANIEEKDTMRVECRGTNAGASLFPLTLHTEKYGALFDERPTYLTEHDPYERQIQRFLEACREDPNYRQAEEAVI
LHRIIDRIYA
>Mature_330_residues
MKIGIIGTGGIATSAHIPNYVKAGMDVVAVMNRTRANGERVARQFGIPNVYETVEEMLTYEQLDAVSICTPNALHKEQVL
LALEAGCHVLCEKPPGISENEAIEMLKAAKRAGKTLQYGFHYRHRADTVLLKRMIDAGELGDIYAATAFALRRRGIPGWG
VFTNKELQGGGALLDIGVHMLDLALHLMGYPKPREVVGHVGQYLGNRPGVGLLGEWDASSLSVEDTARAMITFENGASLL
LDVSYMANIEEKDTMRVECRGTNAGASLFPLTLHTEKYGALFDERPTYLTEHDPYERQIQRFLEACREDPNYRQAEEAVI
LHRIIDRIYA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1787574, Length=331, Percent_Identity=39.5770392749245, Blast_Score=267, Evalue=6e-73,
Organism=Escherichia coli, GI87082405, Length=233, Percent_Identity=27.4678111587983, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081947, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323975, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36558; Mature: 36558

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGTGGIATSAHIPNYVKAGMDVVAVMNRTRANGERVARQFGIPNVYETVEEMLTY
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
EQLDAVSICTPNALHKEQVLLALEAGCHVLCEKPPGISENEAIEMLKAAKRAGKTLQYGF
HHHCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCC
HYRHRADTVLLKRMIDAGELGDIYAATAFALRRRGIPGWGVFTNKELQGGGALLDIGVHM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH
LDLALHLMGYPKPREVVGHVGQYLGNRPGVGLLGEWDASSLSVEDTARAMITFENGASLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCCEEEEEECCCCEEE
LDVSYMANIEEKDTMRVECRGTNAGASLFPLTLHTEKYGALFDERPTYLTEHDPYERQIQ
EEEHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHH
RFLEACREDPNYRQAEEAVILHRIIDRIYA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGIIGTGGIATSAHIPNYVKAGMDVVAVMNRTRANGERVARQFGIPNVYETVEEMLTY
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
EQLDAVSICTPNALHKEQVLLALEAGCHVLCEKPPGISENEAIEMLKAAKRAGKTLQYGF
HHHCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCC
HYRHRADTVLLKRMIDAGELGDIYAATAFALRRRGIPGWGVFTNKELQGGGALLDIGVHM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH
LDLALHLMGYPKPREVVGHVGQYLGNRPGVGLLGEWDASSLSVEDTARAMITFENGASLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCCEEEEEECCCCEEE
LDVSYMANIEEKDTMRVECRGTNAGASLFPLTLHTEKYGALFDERPTYLTEHDPYERQIQ
EEEHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHH
RFLEACREDPNYRQAEEAVILHRIIDRIYA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]