| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is metK [H]
Identifier: 229916472
GI number: 229916472
Start: 695073
End: 696281
Strand: Reverse
Name: metK [H]
Synonym: EAT1b_0742
Alternate gene names: 229916472
Gene position: 696281-695073 (Counterclockwise)
Preceding gene: 229916474
Following gene: 229916470
Centisome position: 23.21
GC content: 49.63
Gene sequence:
>1209_bases ATGTCAAAATTGAACCGTCGACTTTTTACTTCAGAGTCGGTTACTGAAGGACATCCAGACAAAATTTGTGATCAGATTTC TGACTCCATCTTGGATGCCATTTTAGCGGAAGACCCGAATGCCCGTGTTGCGGCAGAAACGTCTGTCACAACAGGTCTTG TACTCGTAGCTGGTGAAATCACAACGTCAACTTACGTGGATATCCCGAAAGTTGTCCGTGAAACAATCCGCGAAATCGGA TACACACGTGCGAAATACGGCTTTGATGCTGAAACGTGTGCGGTCTTGACGTCGATTGATGAGCAATCGGTAGACATCGC GCAAGGTGTTGACCAGGCGCTTGAAGCACGTGAAGGTCAGATGACTGAAGAGGAACTCGATGCAATCGGTGCAGGAGACC AAGGTCTCATGTTCGGATATGCAACAAACGAGACACCTGAACTCATGCCGCTTCCGATCTCGTTGGCACACAAGTTGTCA CGTCGTCTTGCTGAAGTACGTAAGAACGGTACGCTCGAGTACCTTCGTCCGGACGGGAAGACGCAAGTAACGGTTGAGTA TGATGAGGACAACAACCCAGTTCGCATCGATACGATCGTTATTTCGACACAACACGCGGAAGAGATCACGCTTGAGCAAA TTCAAGAAGACTTGAAAAAACATGTCATCGAGGCAGTCATTCCGGCTGAACTCATCGATGCTGAAACAAAATACTTCATC AACCCGACTGGTCGCTTCGTAATCGGTGGACCACAAGGAGATGCAGGTTTGACAGGACGTAAGATCATCGTTGATACGTA CGGTGGATACGCTCGTCACGGTGGCGGCGCATTCTCTGGTAAAGATCCTACAAAAGTTGACCGTTCAGCGGCATACGCAG CTCGCTATGTAGCGAAAAACATCGTTGCAGCAGGACTTGCGGATAAAGCGGAAGTTCAACTTGCGTACGCAATCGGTGTT GCACACCCAGTATCGATCGCTGTCGATACGTTCGGCACAGGTAAATTGAGCGAAACGGAGCTCGTTGAACTCGTTCGTGA GAACTTCGACCTCCGTCCGGCAGGCATCATCAAGATGCTCGACCTTCGTCGCCCAATCTACAAACAAACGGCAGCATACG GTCACTTCGGTCGTACAGACATCGAGCTCCCATGGGAGCAAACAGATAAAGCAGCCATTCTTGAAGAAGGCGCGAAACGT TTCGCGTAA
Upstream 100 bases:
>100_bases TATGTCATCGGGGGAGGTTTTTTTCATTACCGTCCCAAAGCAACGCGTAAGGGGAACGAGTACCGTCCACATAATACCCT TATTATAGGAGGTTTTTTGA
Downstream 100 bases:
>100_bases TCATCAAAAACGACCTTTCCGCGGAAAGGTCGTTTTTTTACGTTGTCGGAGGTGTCTGTTTATTTGAATCGGATGAAGAA TCAGTTGTCGTCGTATCTTG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSKLNRRLFTSESVTEGHPDKICDQISDSILDAILAEDPNARVAAETSVTTGLVLVAGEITTSTYVDIPKVVRETIREIG YTRAKYGFDAETCAVLTSIDEQSVDIAQGVDQALEAREGQMTEEELDAIGAGDQGLMFGYATNETPELMPLPISLAHKLS RRLAEVRKNGTLEYLRPDGKTQVTVEYDEDNNPVRIDTIVISTQHAEEITLEQIQEDLKKHVIEAVIPAELIDAETKYFI NPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGV AHPVSIAVDTFGTGKLSETELVELVRENFDLRPAGIIKMLDLRRPIYKQTAAYGHFGRTDIELPWEQTDKAAILEEGAKR FA
Sequences:
>Translated_402_residues MSKLNRRLFTSESVTEGHPDKICDQISDSILDAILAEDPNARVAAETSVTTGLVLVAGEITTSTYVDIPKVVRETIREIG YTRAKYGFDAETCAVLTSIDEQSVDIAQGVDQALEAREGQMTEEELDAIGAGDQGLMFGYATNETPELMPLPISLAHKLS RRLAEVRKNGTLEYLRPDGKTQVTVEYDEDNNPVRIDTIVISTQHAEEITLEQIQEDLKKHVIEAVIPAELIDAETKYFI NPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGV AHPVSIAVDTFGTGKLSETELVELVRENFDLRPAGIIKMLDLRRPIYKQTAAYGHFGRTDIELPWEQTDKAAILEEGAKR FA >Mature_401_residues SKLNRRLFTSESVTEGHPDKICDQISDSILDAILAEDPNARVAAETSVTTGLVLVAGEITTSTYVDIPKVVRETIREIGY TRAKYGFDAETCAVLTSIDEQSVDIAQGVDQALEAREGQMTEEELDAIGAGDQGLMFGYATNETPELMPLPISLAHKLSR RLAEVRKNGTLEYLRPDGKTQVTVEYDEDNNPVRIDTIVISTQHAEEITLEQIQEDLKKHVIEAVIPAELIDAETKYFIN PTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVA HPVSIAVDTFGTGKLSETELVELVRENFDLRPAGIIKMLDLRRPIYKQTAAYGHFGRTDIELPWEQTDKAAILEEGAKRF A
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=382, Percent_Identity=61.2565445026178, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI4557737, Length=382, Percent_Identity=60.9947643979058, Blast_Score=455, Evalue=1e-128, Organism=Escherichia coli, GI1789311, Length=395, Percent_Identity=65.0632911392405, Blast_Score=522, Evalue=1e-149, Organism=Caenorhabditis elegans, GI25145633, Length=396, Percent_Identity=56.8181818181818, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17538498, Length=386, Percent_Identity=57.5129533678757, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17538494, Length=386, Percent_Identity=57.2538860103627, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17551082, Length=386, Percent_Identity=55.1813471502591, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI32565905, Length=386, Percent_Identity=53.1088082901554, Blast_Score=387, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565911, Length=338, Percent_Identity=55.9171597633136, Blast_Score=371, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25145635, Length=344, Percent_Identity=54.6511627906977, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565903, Length=311, Percent_Identity=57.2347266881029, Blast_Score=345, Evalue=2e-95, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=54.7619047619048, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI32565907, Length=37, Percent_Identity=78.3783783783784, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323209, Length=383, Percent_Identity=60.313315926893, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6320710, Length=393, Percent_Identity=58.2697201017812, Blast_Score=456, Evalue=1e-129, Organism=Drosophila melanogaster, GI45552159, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580529, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580537, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580533, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580535, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580531, Length=383, Percent_Identity=57.7023498694517, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580527, Length=383, Percent_Identity=56.9190600522193, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580525, Length=383, Percent_Identity=56.9190600522193, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580541, Length=371, Percent_Identity=55.7951482479784, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580539, Length=127, Percent_Identity=55.1181102362205, Blast_Score=135, Evalue=5e-32,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 43827; Mature: 43696
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLNRRLFTSESVTEGHPDKICDQISDSILDAILAEDPNARVAAETSVTTGLVLVAGEI CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEECC TTSTYVDIPKVVRETIREIGYTRAKYGFDAETCAVLTSIDEQSVDIAQGVDQALEAREGQ CCCHHCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC MTEEELDAIGAGDQGLMFGYATNETPELMPLPISLAHKLSRRLAEVRKNGTLEYLRPDGK CCHHHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCC TQVTVEYDEDNNPVRIDTIVISTQHAEEITLEQIQEDLKKHVIEAVIPAELIDAETKYFI EEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVAAGLADKAEVQLAYAIGVAHPVSIAVDTFGTGKLSETELVELVRENFDLRPAGIIKML HHHHCCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH DLRRPIYKQTAAYGHFGRTDIELPWEQTDKAAILEEGAKRFA HHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SKLNRRLFTSESVTEGHPDKICDQISDSILDAILAEDPNARVAAETSVTTGLVLVAGEI CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEECC TTSTYVDIPKVVRETIREIGYTRAKYGFDAETCAVLTSIDEQSVDIAQGVDQALEAREGQ CCCHHCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC MTEEELDAIGAGDQGLMFGYATNETPELMPLPISLAHKLSRRLAEVRKNGTLEYLRPDGK CCHHHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCC TQVTVEYDEDNNPVRIDTIVISTQHAEEITLEQIQEDLKKHVIEAVIPAELIDAETKYFI EEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVAAGLADKAEVQLAYAIGVAHPVSIAVDTFGTGKLSETELVELVRENFDLRPAGIIKML HHHHCCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH DLRRPIYKQTAAYGHFGRTDIELPWEQTDKAAILEEGAKRFA HHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]