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The map label for this gene is ytqB [H]

Identifier: 229916468

GI number: 229916468

Start: 692472

End: 693044

Strand: Direct

Name: ytqB [H]

Synonym: EAT1b_0738

Alternate gene names: 229916468

Gene position: 692472-693044 (Clockwise)

Preceding gene: 229916467

Following gene: 229916471

Centisome position: 23.08

GC content: 49.74

Gene sequence:

>573_bases
ATGGGATTAATGAGAGTACTACCTTTTGCAAAACAATTACTACATGACCATATCGAGGAAGGTCAGGTCGCCATCGATAT
GACGGCCGGGAACGGACACGATACGTTGTTTCTAGCGAATGCCGTAGGCGAGACAGGACATGTCTATGCCTTTGATATCC
AATCAGAAGCTGTAGCAGCCACAAAGGCGCGGGTTGAAGAATCGGGTGTCAGTAATCGGGTGACCGTGATTCATGATAGT
CATGATACGGTCCAAGCAGTCGTTGAAAAGGAAGCGCGGCCGATCACCGCGGCCGTCTTCAACTTAGGGTATTTACCGGG
AAGCGACAAATCCATCACGACACACGGAAATACGACGATTGCTGCATTATCCCAACTATTAGACGTCATGGCCGTCGGTG
GCGTCATCGTCATCGTGATTTACCACGGACATGAAAGTGGGAAAGTCGAACGAGACGAGGTGCTCCGTTATGTCGAGTCC
CTCGATCAAAAGCAGGCGGGTGTCCTGCGTTATGGGTTTATCAACCAAGTCAATCATCCCCCATTCATCGTGGCGATTGA
AAAACGTGCATAA

Upstream 100 bases:

>100_bases
GGTCCGTTATGGAGCCGTCACAAGATGCAGGTGCTTAACAAGATTCGTGCGGAATTGGAGCGCCGGGATTCTTTCCAAGG
AAAAAAGAAGGATGAGATCT

Downstream 100 bases:

>100_bases
GAAAAAGGCGGCTCACTAGAGTCGCCTTCTGTCATTCTTGAATCAATTCATAAAACGTCATGAGGGTTTCCGCGAATTTC
GTGTTCAATCGTTCGTAACC

Product: rRNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGLMRVLPFAKQLLHDHIEEGQVAIDMTAGNGHDTLFLANAVGETGHVYAFDIQSEAVAATKARVEESGVSNRVTVIHDS
HDTVQAVVEKEARPITAAVFNLGYLPGSDKSITTHGNTTIAALSQLLDVMAVGGVIVIVIYHGHESGKVERDEVLRYVES
LDQKQAGVLRYGFINQVNHPPFIVAIEKRA

Sequences:

>Translated_190_residues
MGLMRVLPFAKQLLHDHIEEGQVAIDMTAGNGHDTLFLANAVGETGHVYAFDIQSEAVAATKARVEESGVSNRVTVIHDS
HDTVQAVVEKEARPITAAVFNLGYLPGSDKSITTHGNTTIAALSQLLDVMAVGGVIVIVIYHGHESGKVERDEVLRYVES
LDQKQAGVLRYGFINQVNHPPFIVAIEKRA
>Mature_189_residues
GLMRVLPFAKQLLHDHIEEGQVAIDMTAGNGHDTLFLANAVGETGHVYAFDIQSEAVAATKARVEESGVSNRVTVIHDSH
DTVQAVVEKEARPITAAVFNLGYLPGSDKSITTHGNTTIAALSQLLDVMAVGGVIVIVIYHGHESGKVERDEVLRYVESL
DQKQAGVLRYGFINQVNHPPFIVAIEKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20564; Mature: 20432

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMRVLPFAKQLLHDHIEEGQVAIDMTAGNGHDTLFLANAVGETGHVYAFDIQSEAVAA
CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCHHHHH
TKARVEESGVSNRVTVIHDSHDTVQAVVEKEARPITAAVFNLGYLPGSDKSITTHGNTTI
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHH
AALSQLLDVMAVGGVIVIVIYHGHESGKVERDEVLRYVESLDQKQAGVLRYGFINQVNHP
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCHHHCCEEEEHHHHCCCCC
PFIVAIEKRA
CEEEEEECCC
>Mature Secondary Structure 
GLMRVLPFAKQLLHDHIEEGQVAIDMTAGNGHDTLFLANAVGETGHVYAFDIQSEAVAA
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCHHHHH
TKARVEESGVSNRVTVIHDSHDTVQAVVEKEARPITAAVFNLGYLPGSDKSITTHGNTTI
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHH
AALSQLLDVMAVGGVIVIVIYHGHESGKVERDEVLRYVESLDQKQAGVLRYGFINQVNHP
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCHHHCCEEEEHHHHCCCCC
PFIVAIEKRA
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]