| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is yttB [H]
Identifier: 229916466
GI number: 229916466
Start: 690181
End: 691365
Strand: Reverse
Name: yttB [H]
Synonym: EAT1b_0736
Alternate gene names: 229916466
Gene position: 691365-690181 (Counterclockwise)
Preceding gene: 229916469
Following gene: 229916465
Centisome position: 23.05
GC content: 50.21
Gene sequence:
>1185_bases GTGAACAATAAAATGCCAATTTCGGTATGGATTTTAGTCATTGCGATGGCGCTCAATACAACGGCGGCGTCTTTTTTATG GCCGTTTAACACACTGTATATTCATGATTTTTTAGGTGAGTCGATGACGCTTGCTGGGGTGGCGCTTCTTGTGAACTCAG CACTCGCGATTGTAGGGAACTACATCGGAGGGACGCTATTCGATCGAATCGGTGGGAAGACGACGTTGATGATTTCTGTC GGTCTCTTGCTCGCGAGCTCACTTGGATTTTTACTGTTTCATGCCACGTTCTTCGGCTACCTCGTATGGCTCGGATTGAT CGGTCTTTCAGGTGGACTCGTCTTTCCGACCGTATATGCGTTTGCGGGTCTCATATGGCCAGAAGGGGGACGCCGTTCGT TCAATGCGATTTACGTCGCGCAAAACGTGGGGGTCGCCCTCGGTACGGCAATGAGTGGTCAAATCGCTCGATTTAACATC GAGTGGATTTTTTTTGCGAACTTCTTCTTATCGGTCTTATTTGTCGTGGTGCTCTTGTTTGGACTGCGTTATTTGAAAAA CCCGGCACGTCCGGTCGTTCAGTCGCAACTCGAAGCGGCCGCCACGACACTCTCGAGTGCGACGATGAAGTCGATGTGGT ATGTCGCCGTTGGTTATGCGGTACTTTGGTTCGTGTACGTGCAATGGCAAGGGACGATTGCCGTTCACTCGAAAGACCTC GGTGTCACAATCAGTCAATACTCACTCCTTTGGACAGTGAACGGGGCGATGATCGTCTTCGCACAACCGTTGCTCAATCG TGTCTTACGACAGTTTGAGGACGACTTAAAACGTCAACTGATCATCGGGGCATCCATTTTCCTCGGCGCGTTCTTGATTG TCCCATTCGCTGGTGGGTTCGGAATGTTCATGGTCGCGATGGTCGTCATGACCATCGGGGAGATGTTTGTCTGGCCGGCG GTTCCGACGATTGCGGCGAAACTCGCCCCTCCTGGGAAAGCTGGACAATACCAAGGGCTCGTCAATATCGCAGCATCCGT CGGTCGGATGATTGGACCGACGTTCTCCGGTTTGTTATTCGATGCGTTCGGCATGAATGCGGTATTTACGTTGATTATTA TGCTGATTATCACAGCTAACATCGTCTTCTTGCGCATTCGTTCATTAAATGTTCAAAGTTCATGA
Upstream 100 bases:
>100_bases TTCGTTGGCGTTCGTTTAGGTTTGATAAGGAAATCTTGTCGATTCGGCCTTTTTGTGCCGATTTTTTTAATGTGAAAGAA GAATGAAAGGAGGACTTGGT
Downstream 100 bases:
>100_bases CTTTGCGCATATTCTCTACAGATTTAAAGCTTCGACCTATTGACTTTCGAGGATAAAATTTAGGTGAAGGATCCTTTCAA CCACATATGTTTGTTGTCGG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNNKMPISVWILVIAMALNTTAASFLWPFNTLYIHDFLGESMTLAGVALLVNSALAIVGNYIGGTLFDRIGGKTTLMISV GLLLASSLGFLLFHATFFGYLVWLGLIGLSGGLVFPTVYAFAGLIWPEGGRRSFNAIYVAQNVGVALGTAMSGQIARFNI EWIFFANFFLSVLFVVVLLFGLRYLKNPARPVVQSQLEAAATTLSSATMKSMWYVAVGYAVLWFVYVQWQGTIAVHSKDL GVTISQYSLLWTVNGAMIVFAQPLLNRVLRQFEDDLKRQLIIGASIFLGAFLIVPFAGGFGMFMVAMVVMTIGEMFVWPA VPTIAAKLAPPGKAGQYQGLVNIAASVGRMIGPTFSGLLFDAFGMNAVFTLIIMLIITANIVFLRIRSLNVQSS
Sequences:
>Translated_394_residues MNNKMPISVWILVIAMALNTTAASFLWPFNTLYIHDFLGESMTLAGVALLVNSALAIVGNYIGGTLFDRIGGKTTLMISV GLLLASSLGFLLFHATFFGYLVWLGLIGLSGGLVFPTVYAFAGLIWPEGGRRSFNAIYVAQNVGVALGTAMSGQIARFNI EWIFFANFFLSVLFVVVLLFGLRYLKNPARPVVQSQLEAAATTLSSATMKSMWYVAVGYAVLWFVYVQWQGTIAVHSKDL GVTISQYSLLWTVNGAMIVFAQPLLNRVLRQFEDDLKRQLIIGASIFLGAFLIVPFAGGFGMFMVAMVVMTIGEMFVWPA VPTIAAKLAPPGKAGQYQGLVNIAASVGRMIGPTFSGLLFDAFGMNAVFTLIIMLIITANIVFLRIRSLNVQSS >Mature_394_residues MNNKMPISVWILVIAMALNTTAASFLWPFNTLYIHDFLGESMTLAGVALLVNSALAIVGNYIGGTLFDRIGGKTTLMISV GLLLASSLGFLLFHATFFGYLVWLGLIGLSGGLVFPTVYAFAGLIWPEGGRRSFNAIYVAQNVGVALGTAMSGQIARFNI EWIFFANFFLSVLFVVVLLFGLRYLKNPARPVVQSQLEAAATTLSSATMKSMWYVAVGYAVLWFVYVQWQGTIAVHSKDL GVTISQYSLLWTVNGAMIVFAQPLLNRVLRQFEDDLKRQLIIGASIFLGAFLIVPFAGGFGMFMVAMVVMTIGEMFVWPA VPTIAAKLAPPGKAGQYQGLVNIAASVGRMIGPTFSGLLFDAFGMNAVFTLIIMLIITANIVFLRIRSLNVQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42772; Mature: 42772
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKMPISVWILVIAMALNTTAASFLWPFNTLYIHDFLGESMTLAGVALLVNSALAIVGN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YIGGTLFDRIGGKTTLMISVGLLLASSLGFLLFHATFFGYLVWLGLIGLSGGLVFPTVYA HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FAGLIWPEGGRRSFNAIYVAQNVGVALGTAMSGQIARFNIEWIFFANFFLSVLFVVVLLF HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH GLRYLKNPARPVVQSQLEAAATTLSSATMKSMWYVAVGYAVLWFVYVQWQGTIAVHSKDL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEECCCC GVTISQYSLLWTVNGAMIVFAQPLLNRVLRQFEDDLKRQLIIGASIFLGAFLIVPFAGGF CEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GMFMVAMVVMTIGEMFVWPAVPTIAAKLAPPGKAGQYQGLVNIAASVGRMIGPTFSGLLF HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH DAFGMNAVFTLIIMLIITANIVFLRIRSLNVQSS HHHCHHHHHHHHHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure MNNKMPISVWILVIAMALNTTAASFLWPFNTLYIHDFLGESMTLAGVALLVNSALAIVGN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YIGGTLFDRIGGKTTLMISVGLLLASSLGFLLFHATFFGYLVWLGLIGLSGGLVFPTVYA HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FAGLIWPEGGRRSFNAIYVAQNVGVALGTAMSGQIARFNIEWIFFANFFLSVLFVVVLLF HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH GLRYLKNPARPVVQSQLEAAATTLSSATMKSMWYVAVGYAVLWFVYVQWQGTIAVHSKDL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEECCCC GVTISQYSLLWTVNGAMIVFAQPLLNRVLRQFEDDLKRQLIIGASIFLGAFLIVPFAGGF CEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GMFMVAMVVMTIGEMFVWPAVPTIAAKLAPPGKAGQYQGLVNIAASVGRMIGPTFSGLLF HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH DAFGMNAVFTLIIMLIITANIVFLRIRSLNVQSS HHHCHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]