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The map label for this gene is ytjP [H]

Identifier: 229916455

GI number: 229916455

Start: 677023

End: 678411

Strand: Reverse

Name: ytjP [H]

Synonym: EAT1b_0725

Alternate gene names: 229916455

Gene position: 678411-677023 (Counterclockwise)

Preceding gene: 229916458

Following gene: 229916454

Centisome position: 22.61

GC content: 50.04

Gene sequence:

>1389_bases
ATGAATTGGAGACAGGAAGTCGACAATCGTAAAGATGCATTTTTAGAAGATTTGAAAGGATTACTTCAAATCCCTAGCGT
GCTCGATGAATCGAAAGCGGCACCGAACATGCCGTTTGGTCCTGAGGTTCGTCAGGCGCTTGACTACATGTTTGAAATTG
GTGAGCGAGATGGATTCAAAACAAAGGACGTCGGCGGTTACGCGGGACATTTGGAATACGGGGACGGTGAGGAAATCGTC
GGCATTCTATGTCACCTTGACGTCGTCCCAGCAGGCGATGGCTGGACATATGGCGCATTCAATCCGACCATCACAACTGA
CGGGAAAATTGTAGCGCGTGGAAGTAACGATGATAAAGGTCCGTCTATGGCGGCATACTATGGATTACGAATCGTCAAAG
AGCTCGGCTTACCACTTTCAAAACGCGTCCGTTTGATTGCAGGTTGCGATGAGGAGAGCGAATGGCGCTGTGTCCGTGAG
TATTTCAAACAAGAACAGATGCCGACATACGGATTTGCGCCAGATGCGGATTTCCCGATCATCAATGCTGAAAAAGGATT
GTATGACGGTGTGTTGACTCAATTACCGATTCAACGTGTACCAGGTTCTGCCTACCATCTCGTGTCATTCACGAGTGGGG
AGCGTCCGAATATGGTGCCGGACTTCGCGAAAGCCGAATTGAAGACGGATGAGGTACTCGAGGAGAAGTTCGAGGCGTAT
CTTGAAAAATATGAAGCTGACGGAACGTGTGAATACGACCGTGGCACATATACGTTTACGATGAAAGGAAAAGCGGCGCA
CGCGATGGAACCGGATAACGGGATCAATGCTGCGTACGTGCTGGCTGGGTTCCTGTTGCACCTTCCTCTCGACATTCAAG
GGGAACGCTTCATTGAACTCGTTCGTCACGTGTTTGCAGACTCACGTGGAATTTCTCTCGGGATTGAAGCGAGCGATGAG
ACGGGCGACTTGACGATCAATGGCGGCGTGTTCCGATACAATGAGGAAGAACGAACAGCAACGGTCAACATCCGTTACCC
GTATACGGCCAAATTCGAAGAACGTTTACAAAACCTACGTGAAATCGCGTTGTCATTTGGTTTCGAGTTGAAGACCCGTC
AACATATGCCGCCTCATCACGTGGCAGAAGATCACCCACTCGTGAAGACGCTAGCAGACGTATACGAGCGTCAAACGGGA
GAGCACGCGAACTTGATGGCCATCGGAGGCGGTACGTATGCACGTTCACTCGAGGCTGGTGTCGCGTTCGGCGCATTGTT
CCCAGGCGCTAAAGATGTGGCGCATCAGGTCGATGAATATATGGAGATAGAAGATTTATTACGCGCTGCAGCAATCTATG
CTGAGGCCATTTACGAGCTCGCTAAATAA

Upstream 100 bases:

>100_bases
TTAAACACGAACGAAAAAAACTTTTCTAAATGAATGTTCGTCTTTCATACATTTGGATATACTAGTAAGGGAGAGAACAT
TCGCAAAAGGGGAGATGAAC

Downstream 100 bases:

>100_bases
GAAACAAGGAGAGCTGGCTGGTATAGTCGGCTCTCTGTCCTTTAGGAAGGAAGTTATCATTGGATTCGCAAAAGAGATTG
TTTCAGTCTGTGTACGTCGC

Product: dipeptidase

Products: succinate; LL-2,6-diaminoheptanedioate

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNWRQEVDNRKDAFLEDLKGLLQIPSVLDESKAAPNMPFGPEVRQALDYMFEIGERDGFKTKDVGGYAGHLEYGDGEEIV
GILCHLDVVPAGDGWTYGAFNPTITTDGKIVARGSNDDKGPSMAAYYGLRIVKELGLPLSKRVRLIAGCDEESEWRCVRE
YFKQEQMPTYGFAPDADFPIINAEKGLYDGVLTQLPIQRVPGSAYHLVSFTSGERPNMVPDFAKAELKTDEVLEEKFEAY
LEKYEADGTCEYDRGTYTFTMKGKAAHAMEPDNGINAAYVLAGFLLHLPLDIQGERFIELVRHVFADSRGISLGIEASDE
TGDLTINGGVFRYNEEERTATVNIRYPYTAKFEERLQNLREIALSFGFELKTRQHMPPHHVAEDHPLVKTLADVYERQTG
EHANLMAIGGGTYARSLEAGVAFGALFPGAKDVAHQVDEYMEIEDLLRAAAIYAEAIYELAK

Sequences:

>Translated_462_residues
MNWRQEVDNRKDAFLEDLKGLLQIPSVLDESKAAPNMPFGPEVRQALDYMFEIGERDGFKTKDVGGYAGHLEYGDGEEIV
GILCHLDVVPAGDGWTYGAFNPTITTDGKIVARGSNDDKGPSMAAYYGLRIVKELGLPLSKRVRLIAGCDEESEWRCVRE
YFKQEQMPTYGFAPDADFPIINAEKGLYDGVLTQLPIQRVPGSAYHLVSFTSGERPNMVPDFAKAELKTDEVLEEKFEAY
LEKYEADGTCEYDRGTYTFTMKGKAAHAMEPDNGINAAYVLAGFLLHLPLDIQGERFIELVRHVFADSRGISLGIEASDE
TGDLTINGGVFRYNEEERTATVNIRYPYTAKFEERLQNLREIALSFGFELKTRQHMPPHHVAEDHPLVKTLADVYERQTG
EHANLMAIGGGTYARSLEAGVAFGALFPGAKDVAHQVDEYMEIEDLLRAAAIYAEAIYELAK
>Mature_462_residues
MNWRQEVDNRKDAFLEDLKGLLQIPSVLDESKAAPNMPFGPEVRQALDYMFEIGERDGFKTKDVGGYAGHLEYGDGEEIV
GILCHLDVVPAGDGWTYGAFNPTITTDGKIVARGSNDDKGPSMAAYYGLRIVKELGLPLSKRVRLIAGCDEESEWRCVRE
YFKQEQMPTYGFAPDADFPIINAEKGLYDGVLTQLPIQRVPGSAYHLVSFTSGERPNMVPDFAKAELKTDEVLEEKFEAY
LEKYEADGTCEYDRGTYTFTMKGKAAHAMEPDNGINAAYVLAGFLLHLPLDIQGERFIELVRHVFADSRGISLGIEASDE
TGDLTINGGVFRYNEEERTATVNIRYPYTAKFEERLQNLREIALSFGFELKTRQHMPPHHVAEDHPLVKTLADVYERQTG
EHANLMAIGGGTYARSLEAGVAFGALFPGAKDVAHQVDEYMEIEDLLRAAAIYAEAIYELAK

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.1.18

Molecular weight: Translated: 51511; Mature: 51511

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRQEVDNRKDAFLEDLKGLLQIPSVLDESKAAPNMPFGPEVRQALDYMFEIGERDGFK
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
TKDVGGYAGHLEYGDGEEIVGILCHLDVVPAGDGWTYGAFNPTITTDGKIVARGSNDDKG
CCCCCCEECCCCCCCCHHHEEEEEEEEEEECCCCCEECCCCCEEECCCEEEEECCCCCCC
PSMAAYYGLRIVKELGLPLSKRVRLIAGCDEESEWRCVREYFKQEQMPTYGFAPDADFPI
CHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
INAEKGLYDGVLTQLPIQRVPGSAYHLVSFTSGERPNMVPDFAKAELKTDEVLEEKFEAY
EECCCCHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
LEKYEADGTCEYDRGTYTFTMKGKAAHAMEPDNGINAAYVLAGFLLHLPLDIQGERFIEL
HHHHCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
VRHVFADSRGISLGIEASDETGDLTINGGVFRYNEEERTATVNIRYPYTAKFEERLQNLR
HHHHHCCCCCCEEEEECCCCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
EIALSFGFELKTRQHMPPHHVAEDHPLVKTLADVYERQTGEHANLMAIGGGTYARSLEAG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
VAFGALFPGAKDVAHQVDEYMEIEDLLRAAAIYAEAIYELAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNWRQEVDNRKDAFLEDLKGLLQIPSVLDESKAAPNMPFGPEVRQALDYMFEIGERDGFK
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
TKDVGGYAGHLEYGDGEEIVGILCHLDVVPAGDGWTYGAFNPTITTDGKIVARGSNDDKG
CCCCCCEECCCCCCCCHHHEEEEEEEEEEECCCCCEECCCCCEEECCCEEEEECCCCCCC
PSMAAYYGLRIVKELGLPLSKRVRLIAGCDEESEWRCVREYFKQEQMPTYGFAPDADFPI
CHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
INAEKGLYDGVLTQLPIQRVPGSAYHLVSFTSGERPNMVPDFAKAELKTDEVLEEKFEAY
EECCCCHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
LEKYEADGTCEYDRGTYTFTMKGKAAHAMEPDNGINAAYVLAGFLLHLPLDIQGERFIEL
HHHHCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
VRHVFADSRGISLGIEASDETGDLTINGGVFRYNEEERTATVNIRYPYTAKFEERLQNLR
HHHHHCCCCCCEEEEECCCCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
EIALSFGFELKTRQHMPPHHVAEDHPLVKTLADVYERQTGEHANLMAIGGGTYARSLEAG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
VAFGALFPGAKDVAHQVDEYMEIEDLLRAAAIYAEAIYELAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-succinyl-LL-2,6-diaminoheptanedioate; H2O

Specific reaction: N-succinyl-LL-2,6-diaminoheptanedioate + H2O = succinate + LL-2,6-diaminoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]