| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yuaG [H]
Identifier: 229916364
GI number: 229916364
Start: 587000
End: 588520
Strand: Reverse
Name: yuaG [H]
Synonym: EAT1b_0634
Alternate gene names: 229916364
Gene position: 588520-587000 (Counterclockwise)
Preceding gene: 229916365
Following gene: 229916362
Centisome position: 19.62
GC content: 49.24
Gene sequence:
>1521_bases ATGAATACGGCTATCTTAGTCAGCATCATCGTCGGGGTCATCATCCTCGCACTTGTGTTTGTATTCGTATTAAAATATCG CACAGTCGGACCAGATGAGGCACTGATTGTGACAGGTAGTTATTTAGGCAAGAAAAATGTACATAGCGATACATCCGGTA ACCGCGTTAAAATCATTCGCGGTGGCGGGACGTTCGTCTTCCCGGTATTCCAACAAGCGGAACCTCTCAGCCTGCTCTCA AGCAAATTAGAGGTCACAACGCCTGAAGTCTATACAGAGCAGGGTGTCCCGGTCATGGCGGACGGAACAGCCATCATTAA AATTGGTGGATCAATCAGTGAAATCGCGACAGCGGCTGAGCAGTTCCTCGGAAAACCGAAGATTGAACGAGAAAACGAAG CGAAAGAAGTGTTAGAAGGTCATTTGCGCTCGATTTTAGGTTCCATGACCGTTGAAGAGATTTATAAGAACCGTGACAAG TTCTCGCAAGAAGTTCAACGAGTCGCATCACAAGACTTGGCGAAGATGGGATTAGTCATCGTGTCATTCACCATCAAAGA CGTTCGAGATAAGAATGGATACCTAGAATCGTTAGGGAAGCCGCGTATCGCCCAAGTGAAGCGTGATGCTGATATCGCGA CTGCGGAAGCGGATAAAGAGACGCGCATCAAACAGGCGGAAGCGATGAAAGATGCGAAGAAGGCCGAACTTGAGCGTGCC TCTGAAATCGCGGAAGCTGAGAAAGAGAACCAACTCCGAATCGCGGCTTATCGCCGTGAGCAAGATGTTGCCAAAGCCCG GGCCGACCAAGCGTATGAGCTTGAGGAAGCGCGTGCGAAACAAGAAGTCACCGAGCAACAGATGCAAGTTCAAATCATCG AGCGTCAAAAGCAAATTGAGCTCGAAGAGAAAGAGATTATGCGTCGTGAGAAACAATACGATTCAGAAGTGAAGAAAAAA GCCGATGCGGATCGATACTCGATTGAACAGTCTGCCGCCGCGGATAAAGCACGTCAAATCGCAATTGCGGATGCAGAGAA GTATCGTATTGAAGCACAGGCGAAAGCCGATGCGGAACGCGTACGTTTGGCAGGTCTTGCAGAAGCGGATTCTGAACGTG CGAAAGGTGAGGCGGAAGCGGAAATTATCCGTTTGACCGGTCTTGCAGAAGCCGAAGCGAAAGAGAAGATTGCCGAAGCC TTCGCGCAATACGGACAAGCGGCGATTCTCGATATGGTCGTCAAAATGCTTCCTGATTATGCGAAAGAAATTGCATCGCC ACTCGGTAACATCGATCAGATCACGGTCGTGGACACGGGGAGCGGACAAAACGGTGGCGCTGGTAAAGTGACAGGTTACG CAACCGACCTCATGGCATCGCTTCAACAAACATTAAAAGCTTCTTCGGGTATCGATATGAAAGACTTACTCGAGAACTTT GCCGGGAAAGGGAACGTTGCGAAAGCCCCAACACCGGAGCGTGAATTAGCGGATACAACGGTTGCTGCTTCAAAGGAATA A
Upstream 100 bases:
>100_bases GATTTCGACAGATTATCGGGTAGTCATCATTGAAGTAAAAGGCAATATCGCAATCGTCATGCCATATGACGAACCTACAA TTCGAGAGGAGATATAACAC
Downstream 100 bases:
>100_bases CCGACACGAGCCATAGACACCGTCTATGGCTCTGTTTTTGCACATGATTGACTAGTATGAAATCACTTCTGCTGCTTTTA GGACGGAAATAAAATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNTAILVSIIVGVIILALVFVFVLKYRTVGPDEALIVTGSYLGKKNVHSDTSGNRVKIIRGGGTFVFPVFQQAEPLSLLS SKLEVTTPEVYTEQGVPVMADGTAIIKIGGSISEIATAAEQFLGKPKIERENEAKEVLEGHLRSILGSMTVEEIYKNRDK FSQEVQRVASQDLAKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKQAEAMKDAKKAELERA SEIAEAEKENQLRIAAYRREQDVAKARADQAYELEEARAKQEVTEQQMQVQIIERQKQIELEEKEIMRREKQYDSEVKKK ADADRYSIEQSAAADKARQIAIADAEKYRIEAQAKADAERVRLAGLAEADSERAKGEAEAEIIRLTGLAEAEAKEKIAEA FAQYGQAAILDMVVKMLPDYAKEIASPLGNIDQITVVDTGSGQNGGAGKVTGYATDLMASLQQTLKASSGIDMKDLLENF AGKGNVAKAPTPERELADTTVAASKE
Sequences:
>Translated_506_residues MNTAILVSIIVGVIILALVFVFVLKYRTVGPDEALIVTGSYLGKKNVHSDTSGNRVKIIRGGGTFVFPVFQQAEPLSLLS SKLEVTTPEVYTEQGVPVMADGTAIIKIGGSISEIATAAEQFLGKPKIERENEAKEVLEGHLRSILGSMTVEEIYKNRDK FSQEVQRVASQDLAKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKQAEAMKDAKKAELERA SEIAEAEKENQLRIAAYRREQDVAKARADQAYELEEARAKQEVTEQQMQVQIIERQKQIELEEKEIMRREKQYDSEVKKK ADADRYSIEQSAAADKARQIAIADAEKYRIEAQAKADAERVRLAGLAEADSERAKGEAEAEIIRLTGLAEAEAKEKIAEA FAQYGQAAILDMVVKMLPDYAKEIASPLGNIDQITVVDTGSGQNGGAGKVTGYATDLMASLQQTLKASSGIDMKDLLENF AGKGNVAKAPTPERELADTTVAASKE >Mature_506_residues MNTAILVSIIVGVIILALVFVFVLKYRTVGPDEALIVTGSYLGKKNVHSDTSGNRVKIIRGGGTFVFPVFQQAEPLSLLS SKLEVTTPEVYTEQGVPVMADGTAIIKIGGSISEIATAAEQFLGKPKIERENEAKEVLEGHLRSILGSMTVEEIYKNRDK FSQEVQRVASQDLAKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKQAEAMKDAKKAELERA SEIAEAEKENQLRIAAYRREQDVAKARADQAYELEEARAKQEVTEQQMQVQIIERQKQIELEEKEIMRREKQYDSEVKKK ADADRYSIEQSAAADKARQIAIADAEKYRIEAQAKADAERVRLAGLAEADSERAKGEAEAEIIRLTGLAEAEAKEKIAEA FAQYGQAAILDMVVKMLPDYAKEIASPLGNIDQITVVDTGSGQNGGAGKVTGYATDLMASLQQTLKASSGIDMKDLLENF AGKGNVAKAPTPERELADTTVAASKE
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Homo sapiens, GI5031699, Length=452, Percent_Identity=40.7079646017699, Blast_Score=311, Evalue=7e-85, Organism=Homo sapiens, GI94538362, Length=450, Percent_Identity=36.6666666666667, Blast_Score=270, Evalue=3e-72, Organism=Escherichia coli, GI1789430, Length=501, Percent_Identity=25.1497005988024, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI17137546, Length=449, Percent_Identity=41.4253897550111, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24653894, Length=453, Percent_Identity=41.0596026490066, Blast_Score=299, Evalue=2e-81, Organism=Drosophila melanogaster, GI24642033, Length=456, Percent_Identity=36.4035087719298, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24642031, Length=456, Percent_Identity=36.4035087719298, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24642029, Length=469, Percent_Identity=35.8208955223881, Blast_Score=268, Evalue=7e-72, Organism=Drosophila melanogaster, GI24642027, Length=469, Percent_Identity=35.8208955223881, Blast_Score=268, Evalue=7e-72, Organism=Drosophila melanogaster, GI24642061, Length=368, Percent_Identity=37.7717391304348, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI281360882, Length=345, Percent_Identity=36.231884057971, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI281360884, Length=307, Percent_Identity=35.1791530944625, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24642065, Length=307, Percent_Identity=35.1791530944625, Blast_Score=170, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 55340; Mature: 55340
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAILVSIIVGVIILALVFVFVLKYRTVGPDEALIVTGSYLGKKNVHSDTSGNRVKIIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE GGGTFVFPVFQQAEPLSLLSSKLEVTTPEVYTEQGVPVMADGTAIIKIGGSISEIATAAE CCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEECCEEEEEECCCHHHHHHHHH QFLGKPKIERENEAKEVLEGHLRSILGSMTVEEIYKNRDKFSQEVQRVASQDLAKMGLVI HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKQAEAMKDAKKAELERA HHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SEIAEAEKENQLRIAAYRREQDVAKARADQAYELEEARAKQEVTEQQMQVQIIERQKQIE HHHHHHHHCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEEKEIMRREKQYDSEVKKKADADRYSIEQSAAADKARQIAIADAEKYRIEAQAKADAER CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHEEHHHHHCCHHH VRLAGLAEADSERAKGEAEAEIIRLTGLAEAEAKEKIAEAFAQYGQAAILDMVVKMLPDY HHHHHHHHCCHHHCCCCHHHHEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AKEIASPLGNIDQITVVDTGSGQNGGAGKVTGYATDLMASLQQTLKASSGIDMKDLLENF HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGKGNVAKAPTPERELADTTVAASKE CCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MNTAILVSIIVGVIILALVFVFVLKYRTVGPDEALIVTGSYLGKKNVHSDTSGNRVKIIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE GGGTFVFPVFQQAEPLSLLSSKLEVTTPEVYTEQGVPVMADGTAIIKIGGSISEIATAAE CCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEECCEEEEEECCCHHHHHHHHH QFLGKPKIERENEAKEVLEGHLRSILGSMTVEEIYKNRDKFSQEVQRVASQDLAKMGLVI HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKQAEAMKDAKKAELERA HHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SEIAEAEKENQLRIAAYRREQDVAKARADQAYELEEARAKQEVTEQQMQVQIIERQKQIE HHHHHHHHCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEEKEIMRREKQYDSEVKKKADADRYSIEQSAAADKARQIAIADAEKYRIEAQAKADAER CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHEEHHHHHCCHHH VRLAGLAEADSERAKGEAEAEIIRLTGLAEAEAKEKIAEAFAQYGQAAILDMVVKMLPDY HHHHHHHHCCHHHCCCCHHHHEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AKEIASPLGNIDQITVVDTGSGQNGGAGKVTGYATDLMASLQQTLKASSGIDMKDLLENF HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGKGNVAKAPTPERELADTTVAASKE CCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]