| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is glcK [H]
Identifier: 229916281
GI number: 229916281
Start: 498168
End: 499130
Strand: Reverse
Name: glcK [H]
Synonym: EAT1b_0550
Alternate gene names: 229916281
Gene position: 499130-498168 (Counterclockwise)
Preceding gene: 229916282
Following gene: 229916280
Centisome position: 16.64
GC content: 49.01
Gene sequence:
>963_bases ATGAAATGGTTATTAGGTATCGACATCGGTGGTACGACGGTGAAGATGGCCGTTTTAGACATGAACGGCATCATTTCGGA TAAGTGGGAAGTCAAAACGGATATTCGAGAGAATGGTGTACATATTCCAAAAGACATCGCAGCTTCTTTTGAAACATACT TACAAACATCAGGTAAGAAGAAAGAAGATTTTGCGGGTGCGGGAATCGGGGCACCAGGATTCGTCAACTTCTCAGAAGGA GTTGTCGAATATTCTCCGAACATCGGGTGGAAAGATTTTGCTCTCGTGAGTGAGTTCGAAAAAGCAGTCGGTCTTCCGGC CGTGCTCGAAAATGATGCGAACGCCGCGGCCCTTGGTGAGATGTGGAAAGGTGCCGGCGAAGGGGCATCAGAATTATTGG CGATCACGCTCGGTACAGGTGTCGGTGGTGGCGTGATCACGAACGGAAATATCGTTCATGGGACGGCAGGAATGGCCGGA GAAATCGGGCATATTACCGTGGAACGAGACGAAACGAAAGCTGTGAAGTGTGGTTGTGGTCGCCTCGGGTGTATTGAGAC GATTGCTTCAGCGACCGGCATCTCGCGTTTGGCGTTACAGAAGCGTAAAAATCAAGATACTTCATTAAACGAGTTAAAAG AAGTGACTGCACGTGACGTGTTTGAAGCATATAAGGCTGGTGACTCGATCGCGACAGAAGTCATTGAAGAGATGACGGAA TACCTCGGCTTGACCATCTCAAACATCGCGAACACGCTCAATCCGAAAATGATTGTCATCGGTGGAGGTGTCTCAAAAGC TGGTGACGCGTTATTGGAGCCGCTTGATGCACAGTTCAAACGGTTTGCGCTCGAGCGGGTATACGAGTCGACAACATTCA AAATCGCTGAACTCGAAAACGATGCCGGTGTGATTGGATGTGCTTGGCTGGCACGGAAACACTTCCTTCCGACACGAGTA TGA
Upstream 100 bases:
>100_bases AGATTGACAGAAATCCCCTTAGTGCAAAGGGTTGCACTAAGGGGATAATAGTGTACACTATTCAATGAAAGCGATTTAGT TGAGATGAGGAGTGAACGGT
Downstream 100 bases:
>100_bases AACGGACGCGTCTGCACATTGCAGGCGTGTTTTTTTGTGGGAAAGGGTATGGGATATTGTAAAATTTGTAACGTCACAGT TGATTTTTTATTAAAAAAGG
Product: glucokinase, ROK family
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKWLLGIDIGGTTVKMAVLDMNGIISDKWEVKTDIRENGVHIPKDIAASFETYLQTSGKKKEDFAGAGIGAPGFVNFSEG VVEYSPNIGWKDFALVSEFEKAVGLPAVLENDANAAALGEMWKGAGEGASELLAITLGTGVGGGVITNGNIVHGTAGMAG EIGHITVERDETKAVKCGCGRLGCIETIASATGISRLALQKRKNQDTSLNELKEVTARDVFEAYKAGDSIATEVIEEMTE YLGLTISNIANTLNPKMIVIGGGVSKAGDALLEPLDAQFKRFALERVYESTTFKIAELENDAGVIGCAWLARKHFLPTRV
Sequences:
>Translated_320_residues MKWLLGIDIGGTTVKMAVLDMNGIISDKWEVKTDIRENGVHIPKDIAASFETYLQTSGKKKEDFAGAGIGAPGFVNFSEG VVEYSPNIGWKDFALVSEFEKAVGLPAVLENDANAAALGEMWKGAGEGASELLAITLGTGVGGGVITNGNIVHGTAGMAG EIGHITVERDETKAVKCGCGRLGCIETIASATGISRLALQKRKNQDTSLNELKEVTARDVFEAYKAGDSIATEVIEEMTE YLGLTISNIANTLNPKMIVIGGGVSKAGDALLEPLDAQFKRFALERVYESTTFKIAELENDAGVIGCAWLARKHFLPTRV >Mature_320_residues MKWLLGIDIGGTTVKMAVLDMNGIISDKWEVKTDIRENGVHIPKDIAASFETYLQTSGKKKEDFAGAGIGAPGFVNFSEG VVEYSPNIGWKDFALVSEFEKAVGLPAVLENDANAAALGEMWKGAGEGASELLAITLGTGVGGGVITNGNIVHGTAGMAG EIGHITVERDETKAVKCGCGRLGCIETIASATGISRLALQKRKNQDTSLNELKEVTARDVFEAYKAGDSIATEVIEEMTE YLGLTISNIANTLNPKMIVIGGGVSKAGDALLEPLDAQFKRFALERVYESTTFKIAELENDAGVIGCAWLARKHFLPTRV
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=273, Percent_Identity=30.4029304029304, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI298566315, Length=273, Percent_Identity=30.4029304029304, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI4885285, Length=273, Percent_Identity=30.4029304029304, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI190014632, Length=273, Percent_Identity=30.4029304029304, Blast_Score=102, Evalue=4e-22, Organism=Escherichia coli, GI1786891, Length=260, Percent_Identity=30, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1787878, Length=267, Percent_Identity=28.4644194756554, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787363, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87081733, Length=317, Percent_Identity=29.9684542586751, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI87082230, Length=264, Percent_Identity=30.6818181818182, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI87082127, Length=285, Percent_Identity=24.9122807017544, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1790522, Length=258, Percent_Identity=26.7441860465116, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33984; Mature: 33984
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLLGIDIGGTTVKMAVLDMNGIISDKWEVKTDIRENGVHIPKDIAASFETYLQTSGKK CCEEEEEECCCCEEEEEEEECCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCC KEDFAGAGIGAPGFVNFSEGVVEYSPNIGWKDFALVSEFEKAVGLPAVLENDANAAALGE CHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHH MWKGAGEGASELLAITLGTGVGGGVITNGNIVHGTAGMAGEIGHITVERDETKAVKCGCG HHCCCCCCHHHEEEEEECCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCCCCEECCCC RLGCIETIASATGISRLALQKRKNQDTSLNELKEVTARDVFEAYKAGDSIATEVIEEMTE CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YLGLTISNIANTLNPKMIVIGGGVSKAGDALLEPLDAQFKRFALERVYESTTFKIAELEN HHCEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC DAGVIGCAWLARKHFLPTRV CCCEEHHHHHHHHCCCCCCC >Mature Secondary Structure MKWLLGIDIGGTTVKMAVLDMNGIISDKWEVKTDIRENGVHIPKDIAASFETYLQTSGKK CCEEEEEECCCCEEEEEEEECCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCC KEDFAGAGIGAPGFVNFSEGVVEYSPNIGWKDFALVSEFEKAVGLPAVLENDANAAALGE CHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHH MWKGAGEGASELLAITLGTGVGGGVITNGNIVHGTAGMAGEIGHITVERDETKAVKCGCG HHCCCCCCHHHEEEEEECCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCCCCEECCCC RLGCIETIASATGISRLALQKRKNQDTSLNELKEVTARDVFEAYKAGDSIATEVIEEMTE CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YLGLTISNIANTLNPKMIVIGGGVSKAGDALLEPLDAQFKRFALERVYESTTFKIAELEN HHCEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC DAGVIGCAWLARKHFLPTRV CCCEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]