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The map label for this gene is spo0A [H]

Identifier: 229916245

GI number: 229916245

Start: 468712

End: 469443

Strand: Reverse

Name: spo0A [H]

Synonym: EAT1b_0514

Alternate gene names: 229916245

Gene position: 469443-468712 (Counterclockwise)

Preceding gene: 229916246

Following gene: 229916243

Centisome position: 15.65

GC content: 46.17

Gene sequence:

>732_bases
GTGATTACATTATGTATTGCGGACGACAATCGAGAAATCGTCGATTTGTTGAGCCGACAACTAGAATCTGAGCCTGATCT
TCGTGTCGTAGGTACGGCATACGATGGAGAAACATGCTTGGATGTCGTCAAGACACACCAACCGGATGTACTCTTACTCG
ATATTATCATGCCGCATTTGGATGGGATCGGAGTATTGCAACGCCTAAATGAAGAATTAGGTGATGACAAGCCAGAAGTG
ATCATGTTGAGTGCGTTTGGAAAAGATGAAGTGACGAAACAGGCCGTGCAACTCGGGGCCTCTTATTTCCTCGTCAAACC
GTTCAATATCCAACAGTTATTAACGAAAATTCGTGAATTGTCAGAAGGGACAAATCGAGAATTTGACGGAATGACGCCAG
AAGAAATTGAAATCTCACTCCTGCTTCAGCAACTCGGAATCTCTCCGCGCATCAAAGGGTTCAAGTATATTCGTCAAGCC
GTCATCTACGTGCGAGAACGGCAAGATTTACTCGGACTCATCACGAAAGAATTGTACCCGATGGTCGCAAAAGAGCATGA
GACGACATCCTCTCGTGTAGAACGAGCGATGCGTCATGCAATCAAGACGGCATGGGAGAACGGCATGCGCGATCATGAGA
TGTTCGAAGGGCGACCGGAGCGTGAACGAAGCCCGAAAAACTCGGAGTTCATCTCATACTTCGTCACCTACGTATCGTTT
AAAAATAATTGA

Upstream 100 bases:

>100_bases
TGCTGGCGCTCAAATGACAGACTTGACGAAGCAACACGTCGAAGAATTACTTGAGATGTCACAGCAAGTAAAACAGAAGT
TCATCAAAGGAGTGTCATAA

Downstream 100 bases:

>100_bases
ATCATTTCATGAAGACTAAGTCGTGATGGGACTTAGTCTTTTTTGATGAAACAATCACTTTTAGATTTATTTACTTTATG
AAAGAAAGCGCTTGCAAAAT

Product: sporulation transcriptional activator Spo0A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MITLCIADDNREIVDLLSRQLESEPDLRVVGTAYDGETCLDVVKTHQPDVLLLDIIMPHLDGIGVLQRLNEELGDDKPEV
IMLSAFGKDEVTKQAVQLGASYFLVKPFNIQQLLTKIRELSEGTNREFDGMTPEEIEISLLLQQLGISPRIKGFKYIRQA
VIYVRERQDLLGLITKELYPMVAKEHETTSSRVERAMRHAIKTAWENGMRDHEMFEGRPERERSPKNSEFISYFVTYVSF
KNN

Sequences:

>Translated_243_residues
MITLCIADDNREIVDLLSRQLESEPDLRVVGTAYDGETCLDVVKTHQPDVLLLDIIMPHLDGIGVLQRLNEELGDDKPEV
IMLSAFGKDEVTKQAVQLGASYFLVKPFNIQQLLTKIRELSEGTNREFDGMTPEEIEISLLLQQLGISPRIKGFKYIRQA
VIYVRERQDLLGLITKELYPMVAKEHETTSSRVERAMRHAIKTAWENGMRDHEMFEGRPERERSPKNSEFISYFVTYVSF
KNN
>Mature_243_residues
MITLCIADDNREIVDLLSRQLESEPDLRVVGTAYDGETCLDVVKTHQPDVLLLDIIMPHLDGIGVLQRLNEELGDDKPEV
IMLSAFGKDEVTKQAVQLGASYFLVKPFNIQQLLTKIRELSEGTNREFDGMTPEEIEISLLLQQLGISPRIKGFKYIRQA
VIYVRERQDLLGLITKELYPMVAKEHETTSSRVERAMRHAIKTAWENGMRDHEMFEGRPERERSPKNSEFISYFVTYVSF
KNN

Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with Spo0H (a sigma factor) to control the ex

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR014879
- InterPro:   IPR012052
- InterPro:   IPR011991
- ProDom:   PD010908 [H]

Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]

EC number: NA

Molecular weight: Translated: 27915; Mature: 27915

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLCIADDNREIVDLLSRQLESEPDLRVVGTAYDGETCLDVVKTHQPDVLLLDIIMPHL
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHCC
DGIGVLQRLNEELGDDKPEVIMLSAFGKDEVTKQAVQLGASYFLVKPFNIQQLLTKIREL
CHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
SEGTNREFDGMTPEEIEISLLLQQLGISPRIKGFKYIRQAVIYVRERQDLLGLITKELYP
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAKEHETTSSRVERAMRHAIKTAWENGMRDHEMFEGRPERERSPKNSEFISYFVTYVSF
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHH
KNN
CCC
>Mature Secondary Structure
MITLCIADDNREIVDLLSRQLESEPDLRVVGTAYDGETCLDVVKTHQPDVLLLDIIMPHL
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHCC
DGIGVLQRLNEELGDDKPEVIMLSAFGKDEVTKQAVQLGASYFLVKPFNIQQLLTKIREL
CHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
SEGTNREFDGMTPEEIEISLLLQQLGISPRIKGFKYIRQAVIYVRERQDLLGLITKELYP
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAKEHETTSSRVERAMRHAIKTAWENGMRDHEMFEGRPERERSPKNSEFISYFVTYVSF
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHH
KNN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10089466; 7885226; 10556024; 10731426 [H]