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The map label for this gene is lytB [H]

Identifier: 229916223

GI number: 229916223

Start: 448662

End: 449699

Strand: Direct

Name: lytB [H]

Synonym: EAT1b_0492

Alternate gene names: 229916223

Gene position: 448662-449699 (Clockwise)

Preceding gene: 229916220

Following gene: 229916224

Centisome position: 14.96

GC content: 49.42

Gene sequence:

>1038_bases
ATGATTGCGACACTCAGTCTCGCCATCGCAGCCTTTTTATGGATTCAAACTTCCCGTGAAGACACCTATACCGTCGAAAC
GGTGACGAATGGCGACCGTGTCACAAGGTCGTTCGAATCTCTCGCAGAAGCAAAACGATACATGACGGCCGGTAAGAACC
GGACGCTATTCTCCCCGTCCGGTGAAGTACTCGATTTTACCGGTACGGGAGTTGTCGTCACTCCGAGTGATGCCATCACG
AATTTATATAAAGATGCATCATTTAAAACACGACAATCCTATGTCGCTGGCGGCACGAGACTTCAGCTACTTGAACGTGG
AGAGGATCACCTCAAAGTACGAATCTCCGGGGCAGATGTGTATGTCAAACCGGATCAAATGGCGTTATTCCCTGAAGCGG
TTGTGAATAGACGTGGATATTACGAGATTCGGGATGGTGACGTCTACCATACGGTGGAAGCGAACGCCAATCTCGCTGGT
ACATTCCTTGTAGGCCCGACCGAGAAACGCTCGGATGACCGTTTTTACACAGAACGTGTCCAAGACGTCTTTGATTCTCC
TTATCAATTTGCGTCGATTCGGACGTCGTCTCCATATTCGGCTGAAGAATTCGATCAATATTTAACGTCGATCGATTCAC
CGCTCGCTGGGGAAGGAAAGTCCTTTAAACGGGCAGAAGACACATATAACATCAATGGCCTATTCCTGCTTGCGGTCGCC
GGACATGAGTCCCGCTTTGGAACGTCCGATATCGCTCGAGAAAAGCGTAACCTGTTTGGATTCCGCGCGACAGATGACGA
TCCGAGCGGGAATGCGACATCCTTTAAAACAATTGACGCTAGCGTACAGGCTGCTGCCAAACTGTTTGCGACTAAATATG
CCACAGGGCCATACGCTCGTGGCGATTATCCTGGGAACAAGCAGGAAGGCATCAATATCTTCTATGCCTCCGATCCATAC
TGGGGCGAGAAAGTTGCCGGTACGATGTACACGATCGACCGTGAACTCGGTTTGAAGTACTTGAAAAAAATCCAATGA

Upstream 100 bases:

>100_bases
CCCTTCTCCATCAAATTGTTGACTAAATCAACTCGTTTGGCAATTCAAAAGTTTGGAAGTGATTCGATTGAAACGAAAGA
AAAGACTTAAGGTTTGGCCG

Downstream 100 bases:

>100_bases
CATGACAAGTAGCCCGGCTCATACGAGTCGGGCTACTTGACGTCTGTATACGTTTCAGGACGAAGAAATGATTCAACATG
AATCAATATCTTATTAGAGG

Product: Lysozyme subfamily 2

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MIATLSLAIAAFLWIQTSREDTYTVETVTNGDRVTRSFESLAEAKRYMTAGKNRTLFSPSGEVLDFTGTGVVVTPSDAIT
NLYKDASFKTRQSYVAGGTRLQLLERGEDHLKVRISGADVYVKPDQMALFPEAVVNRRGYYEIRDGDVYHTVEANANLAG
TFLVGPTEKRSDDRFYTERVQDVFDSPYQFASIRTSSPYSAEEFDQYLTSIDSPLAGEGKSFKRAEDTYNINGLFLLAVA
GHESRFGTSDIAREKRNLFGFRATDDDPSGNATSFKTIDASVQAAAKLFATKYATGPYARGDYPGNKQEGINIFYASDPY
WGEKVAGTMYTIDRELGLKYLKKIQ

Sequences:

>Translated_345_residues
MIATLSLAIAAFLWIQTSREDTYTVETVTNGDRVTRSFESLAEAKRYMTAGKNRTLFSPSGEVLDFTGTGVVVTPSDAIT
NLYKDASFKTRQSYVAGGTRLQLLERGEDHLKVRISGADVYVKPDQMALFPEAVVNRRGYYEIRDGDVYHTVEANANLAG
TFLVGPTEKRSDDRFYTERVQDVFDSPYQFASIRTSSPYSAEEFDQYLTSIDSPLAGEGKSFKRAEDTYNINGLFLLAVA
GHESRFGTSDIAREKRNLFGFRATDDDPSGNATSFKTIDASVQAAAKLFATKYATGPYARGDYPGNKQEGINIFYASDPY
WGEKVAGTMYTIDRELGLKYLKKIQ
>Mature_345_residues
MIATLSLAIAAFLWIQTSREDTYTVETVTNGDRVTRSFESLAEAKRYMTAGKNRTLFSPSGEVLDFTGTGVVVTPSDAIT
NLYKDASFKTRQSYVAGGTRLQLLERGEDHLKVRISGADVYVKPDQMALFPEAVVNRRGYYEIRDGDVYHTVEANANLAG
TFLVGPTEKRSDDRFYTERVQDVFDSPYQFASIRTSSPYSAEEFDQYLTSIDSPLAGEGKSFKRAEDTYNINGLFLLAVA
GHESRFGTSDIAREKRNLFGFRATDDDPSGNATSFKTIDASVQAAAKLFATKYATGPYARGDYPGNKQEGINIFYASDPY
WGEKVAGTMYTIDRELGLKYLKKIQ

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG4193

COG function: function code G; Beta- N-acetylglucosaminidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 38353; Mature: 38353

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATLSLAIAAFLWIQTSREDTYTVETVTNGDRVTRSFESLAEAKRYMTAGKNRTLFSPS
CEEHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC
GEVLDFTGTGVVVTPSDAITNLYKDASFKTRQSYVAGGTRLQLLERGEDHLKVRISGADV
CCEEEEECCEEEECCCHHHHHHHHCCCCHHHHHHHCCCCEEEHHHCCCCEEEEEEECCEE
YVKPDQMALFPEAVVNRRGYYEIRDGDVYHTVEANANLAGTFLVGPTEKRSDDRFYTERV
EECCCCCEECHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHH
QDVFDSPYQFASIRTSSPYSAEEFDQYLTSIDSPLAGEGKSFKRAEDTYNINGLFLLAVA
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
GHESRFGTSDIAREKRNLFGFRATDDDPSGNATSFKTIDASVQAAAKLFATKYATGPYAR
CCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC
GDYPGNKQEGINIFYASDPYWGEKVAGTMYTIDRELGLKYLKKIQ
CCCCCCCCCCEEEEEECCCCCCHHHCCEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MIATLSLAIAAFLWIQTSREDTYTVETVTNGDRVTRSFESLAEAKRYMTAGKNRTLFSPS
CEEHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC
GEVLDFTGTGVVVTPSDAITNLYKDASFKTRQSYVAGGTRLQLLERGEDHLKVRISGADV
CCEEEEECCEEEECCCHHHHHHHHCCCCHHHHHHHCCCCEEEHHHCCCCEEEEEEECCEE
YVKPDQMALFPEAVVNRRGYYEIRDGDVYHTVEANANLAGTFLVGPTEKRSDDRFYTERV
EECCCCCEECHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHH
QDVFDSPYQFASIRTSSPYSAEEFDQYLTSIDSPLAGEGKSFKRAEDTYNINGLFLLAVA
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
GHESRFGTSDIAREKRNLFGFRATDDDPSGNATSFKTIDASVQAAAKLFATKYATGPYAR
CCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC
GDYPGNKQEGINIFYASDPYWGEKVAGTMYTIDRELGLKYLKKIQ
CCCCCCCCCCEEEEEECCCCCCHHHCCEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]