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The map label for this gene is yrrO [H]

Identifier: 229916210

GI number: 229916210

Start: 438174

End: 439415

Strand: Reverse

Name: yrrO [H]

Synonym: EAT1b_0479

Alternate gene names: 229916210

Gene position: 439415-438174 (Counterclockwise)

Preceding gene: 229916211

Following gene: 229916209

Centisome position: 14.65

GC content: 49.92

Gene sequence:

>1242_bases
ATGAAACAACGTCCAGAATTATTAGCGCCAGCAGGAAACTTAGAGAAATTAAAGATGGCCATCCATTATGGTGCCGATGC
GGTCTATATCGGCGGACAGCAATTCGGGTTACGTTCACGTGCCGGTAATTTCAGTTATGACGAGATGCGTGAAGGGGTAG
CCTTCGCACATGCAAACGGTGCGAAAGTATACGTTGCTGCGAACATGGTGACGCATGAAGGCGATATCGAGGGGGCAGGT
GACTTCTTCCGAACACTTCGAGATATCGGAATCGATGCGGTCATCGTCTCGGATCCAGCGATGATTGAAACGTGTCTCAC
GGAAGCAGATGGGTTGCCCGTCCATTTGTCGACCCAAGCTTCGGCGACAAACTATGAGACGCTTCGTTTCTGGAAGGAAG
AAGGGCTCGAACGAATCGTCTTGGCACGTGAGGTATCGATGGATGAAATCGTCAAAATGAAACAGGAAGTCGATGTCGAA
ATTGAGACGTTCGTCCATGGGGCGATGTGTATCTCCTATTCCGGTCGATGCACGTTATCGAATCACATGACATTACGGGA
TGCCAACCGTGGGGGATGTGCCCAATCATGCCGCTGGAAATATGGTTTCTTTGAAGAGGGAGATCTTCTGACAGAAGAGA
TGGAATCACGTGACGAAGAGCCGTTCTCGATGAGTTCAGTTGATTTATCGATGGTCCGCCACATACCTGACTTGGTAGAG
GCGGGAGTGGATAGTTTGAAGATTGAAGGACGAATGAAATCGATTCATTACGTCGCGACCGTGTGTAACGTCTATCGTCA
AGTGATTGATGCGTACTGTGAAGACCCAGAGCATTTCGTCTTCGACCCGGCATGGGAAGAGGAAATTTGGAAAGCGGCCC
AACGTGAACTCGCGACCGGGTTCTATTACGGGATCCCGACTGAGAAAGAGCAATTGTTCGGGAAACCTCGTTCGATTCCG
CAATTTGCGTTTGCCGCTCGTGTCATCTCTTATGACCCTGTGACGGGTATGGCAACGCTCGAGCAGCGGAATCACTTTTC
AATCGGTGAAGAGGTTGAATTTTTTGGACCCGGATTTGTTCGTTTCTCACAAGTCATTGAAACGATGGAAGATGTGGACG
GTCACCTCCTCGAGTCTGCTAACCAAGCGATGATGACGATTCGTGTCAAAGTGGATCAGCCGGTCGCGACCGATTACATT
ATGCGTAAGCGAAAAGGCGTGCGTGCTCGTGCGCTCGTTTGA

Upstream 100 bases:

>100_bases
GGAGATGGAACAACGTCTTCATGAGCTACAACCGAAAGCGTTCCGTCTCGGTACGGGATTATGGTTACGCAAGCCAGAAG
AGATTAAGTGAGGGATCAAG

Downstream 100 bases:

>100_bases
CACATCCACCGAGCCAACATAGTCGCCCGTTCCGTCCAATCCTGCTACCCTAAGAAGTAGAGACGGAGGGATGGAAGAAT
GAACCAAAATACGGAGCAAT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKQRPELLAPAGNLEKLKMAIHYGADAVYIGGQQFGLRSRAGNFSYDEMREGVAFAHANGAKVYVAANMVTHEGDIEGAG
DFFRTLRDIGIDAVIVSDPAMIETCLTEADGLPVHLSTQASATNYETLRFWKEEGLERIVLAREVSMDEIVKMKQEVDVE
IETFVHGAMCISYSGRCTLSNHMTLRDANRGGCAQSCRWKYGFFEEGDLLTEEMESRDEEPFSMSSVDLSMVRHIPDLVE
AGVDSLKIEGRMKSIHYVATVCNVYRQVIDAYCEDPEHFVFDPAWEEEIWKAAQRELATGFYYGIPTEKEQLFGKPRSIP
QFAFAARVISYDPVTGMATLEQRNHFSIGEEVEFFGPGFVRFSQVIETMEDVDGHLLESANQAMMTIRVKVDQPVATDYI
MRKRKGVRARALV

Sequences:

>Translated_413_residues
MKQRPELLAPAGNLEKLKMAIHYGADAVYIGGQQFGLRSRAGNFSYDEMREGVAFAHANGAKVYVAANMVTHEGDIEGAG
DFFRTLRDIGIDAVIVSDPAMIETCLTEADGLPVHLSTQASATNYETLRFWKEEGLERIVLAREVSMDEIVKMKQEVDVE
IETFVHGAMCISYSGRCTLSNHMTLRDANRGGCAQSCRWKYGFFEEGDLLTEEMESRDEEPFSMSSVDLSMVRHIPDLVE
AGVDSLKIEGRMKSIHYVATVCNVYRQVIDAYCEDPEHFVFDPAWEEEIWKAAQRELATGFYYGIPTEKEQLFGKPRSIP
QFAFAARVISYDPVTGMATLEQRNHFSIGEEVEFFGPGFVRFSQVIETMEDVDGHLLESANQAMMTIRVKVDQPVATDYI
MRKRKGVRARALV
>Mature_413_residues
MKQRPELLAPAGNLEKLKMAIHYGADAVYIGGQQFGLRSRAGNFSYDEMREGVAFAHANGAKVYVAANMVTHEGDIEGAG
DFFRTLRDIGIDAVIVSDPAMIETCLTEADGLPVHLSTQASATNYETLRFWKEEGLERIVLAREVSMDEIVKMKQEVDVE
IETFVHGAMCISYSGRCTLSNHMTLRDANRGGCAQSCRWKYGFFEEGDLLTEEMESRDEEPFSMSSVDLSMVRHIPDLVE
AGVDSLKIEGRMKSIHYVATVCNVYRQVIDAYCEDPEHFVFDPAWEEEIWKAAQRELATGFYYGIPTEKEQLFGKPRSIP
QFAFAARVISYDPVTGMATLEQRNHFSIGEEVEFFGPGFVRFSQVIETMEDVDGHLLESANQAMMTIRVKVDQPVATDYI
MRKRKGVRARALV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=455, Percent_Identity=33.1868131868132, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI87081910, Length=302, Percent_Identity=37.4172185430464, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1789548, Length=319, Percent_Identity=34.4827586206897, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46457; Mature: 46457

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRPELLAPAGNLEKLKMAIHYGADAVYIGGQQFGLRSRAGNFSYDEMREGVAFAHANG
CCCCCCCCCCCCCHHHHEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHCCEEEEECCC
AKVYVAANMVTHEGDIEGAGDFFRTLRDIGIDAVIVSDPAMIETCLTEADGLPVHLSTQA
CEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEECCC
SATNYETLRFWKEEGLERIVLAREVSMDEIVKMKQEVDVEIETFVHGAMCISYSGRCTLS
CCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCEEEEEEECCCEEEC
NHMTLRDANRGGCAQSCRWKYGFFEEGDLLTEEMESRDEEPFSMSSVDLSMVRHIPDLVE
CCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
AGVDSLKIEGRMKSIHYVATVCNVYRQVIDAYCEDPEHFVFDPAWEEEIWKAAQRELATG
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCC
FYYGIPTEKEQLFGKPRSIPQFAFAARVISYDPVTGMATLEQRNHFSIGEEVEFFGPGFV
EEECCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEECCCCHHH
RFSQVIETMEDVDGHLLESANQAMMTIRVKVDQPVATDYIMRKRKGVRARALV
HHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MKQRPELLAPAGNLEKLKMAIHYGADAVYIGGQQFGLRSRAGNFSYDEMREGVAFAHANG
CCCCCCCCCCCCCHHHHEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHCCEEEEECCC
AKVYVAANMVTHEGDIEGAGDFFRTLRDIGIDAVIVSDPAMIETCLTEADGLPVHLSTQA
CEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEECCC
SATNYETLRFWKEEGLERIVLAREVSMDEIVKMKQEVDVEIETFVHGAMCISYSGRCTLS
CCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCEEEEEEECCCEEEC
NHMTLRDANRGGCAQSCRWKYGFFEEGDLLTEEMESRDEEPFSMSSVDLSMVRHIPDLVE
CCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
AGVDSLKIEGRMKSIHYVATVCNVYRQVIDAYCEDPEHFVFDPAWEEEIWKAAQRELATG
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCC
FYYGIPTEKEQLFGKPRSIPQFAFAARVISYDPVTGMATLEQRNHFSIGEEVEFFGPGFV
EEECCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEECCCCHHH
RFSQVIETMEDVDGHLLESANQAMMTIRVKVDQPVATDYIMRKRKGVRARALV
HHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]