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The map label for this gene is scpA

Identifier: 229916176

GI number: 229916176

Start: 408165

End: 408932

Strand: Reverse

Name: scpA

Synonym: EAT1b_0445

Alternate gene names: 229916176

Gene position: 408932-408165 (Counterclockwise)

Preceding gene: 229916178

Following gene: 229916175

Centisome position: 13.63

GC content: 45.96

Gene sequence:

>768_bases
ATGGAAGCCTATAACGTTAAAATTGATACGTTCGAAGGTCCACTCGACCTGTTGCTCCATTTGATTGGGAAAATGGAGAT
TGATATCGTCGACATTTCCGTGGCAGAAGTCACTGACCAGTATGTCGGCTATATTCGCACGATGCAAAAATTTGAACTCG
ATGTGGCCAGTGAATACTTGGTCATGGCGGCGACGTTGCTCCAATTGAAGAGCAAGCAATTGTTACCGCCAGTGCCGGTC
GAGGATGAAGAGGTTCCAGACTTCAGTGAGGAACCGACACGTGAAGGTCTCATTCGTCAATTGATTGAATACAAAGCATA
TAAAGAAGCGGTCGTCTTCATGCGTGAACAAGAAGAACACCGTCTTGAATTGTATACGCGACCGGGTGAAGATTTGACGA
CGTATATGTCTGAAGAGGTGTCTAAGTATGACGGACCACTCAACTTCTCGGATCTTCTTCACGCCTATTCGAAGATGATT
GAACGGAAACGTTGGAAAGAACGACGCAAAAAGACGATCAAGCGGGAAGAGCGTACGCTTGAAGAGCAGATGACGCGTCT
TCATGAACACGTATCGTCGACGAGACAAACGTCGTTTTTCGCCTTTTTTGTTGAACGACCGAACGTCTCAGATCTCGTCG
TGACGTTTATGGCGCTTTTGGAGCTGATCAAGTTGCGAATCGTCGAAACGAAACAACTCGACCAAGATATTCAAATCTCA
TTCATTGAAGCGTCAAAGAAAGGGGATGAAGCGGTTGCTGTCTTATGA

Upstream 100 bases:

>100_bases
TGAATAAAAGGGGTCATGAATCAATTTTCTCCTTTCGTGTCCACGGTGTTATAAAACATGTTATACTAAAGCGCAAAAAT
GTAAAATGGCAGGTGTCTCT

Downstream 100 bases:

>100_bases
GACGATTATTGAAGGATTGCTGTTCGTCGTCGGTGACGAAGGAATGGAAGTACGCGCGCTCGCCGAGACGCTTGATATCT
CAGAAGCTGCGGCACGAGAA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEAYNVKIDTFEGPLDLLLHLIGKMEIDIVDISVAEVTDQYVGYIRTMQKFELDVASEYLVMAATLLQLKSKQLLPPVPV
EDEEVPDFSEEPTREGLIRQLIEYKAYKEAVVFMREQEEHRLELYTRPGEDLTTYMSEEVSKYDGPLNFSDLLHAYSKMI
ERKRWKERRKKTIKREERTLEEQMTRLHEHVSSTRQTSFFAFFVERPNVSDLVVTFMALLELIKLRIVETKQLDQDIQIS
FIEASKKGDEAVAVL

Sequences:

>Translated_255_residues
MEAYNVKIDTFEGPLDLLLHLIGKMEIDIVDISVAEVTDQYVGYIRTMQKFELDVASEYLVMAATLLQLKSKQLLPPVPV
EDEEVPDFSEEPTREGLIRQLIEYKAYKEAVVFMREQEEHRLELYTRPGEDLTTYMSEEVSKYDGPLNFSDLLHAYSKMI
ERKRWKERRKKTIKREERTLEEQMTRLHEHVSSTRQTSFFAFFVERPNVSDLVVTFMALLELIKLRIVETKQLDQDIQIS
FIEASKKGDEAVAVL
>Mature_255_residues
MEAYNVKIDTFEGPLDLLLHLIGKMEIDIVDISVAEVTDQYVGYIRTMQKFELDVASEYLVMAATLLQLKSKQLLPPVPV
EDEEVPDFSEEPTREGLIRQLIEYKAYKEAVVFMREQEEHRLELYTRPGEDLTTYMSEEVSKYDGPLNFSDLLHAYSKMI
ERKRWKERRKKTIKREERTLEEQMTRLHEHVSSTRQTSFFAFFVERPNVSDLVVTFMALLELIKLRIVETKQLDQDIQIS
FIEASKKGDEAVAVL

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_EXISA (C4L379)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002884822.1
- GeneID:   7871181
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0445
- OMA:   YLLKINI
- ProtClustDB:   CLSK2489247
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29861; Mature: 29861

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYNVKIDTFEGPLDLLLHLIGKMEIDIVDISVAEVTDQYVGYIRTMQKFELDVASEYL
CCCEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLQLKSKQLLPPVPVEDEEVPDFSEEPTREGLIRQLIEYKAYKEAVVFMREQEEH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLELYTRPGEDLTTYMSEEVSKYDGPLNFSDLLHAYSKMIERKRWKERRKKTIKREERTL
HEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQMTRLHEHVSSTRQTSFFAFFVERPNVSDLVVTFMALLELIKLRIVETKQLDQDIQIS
HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FIEASKKGDEAVAVL
EEECCCCCCCEEECC
>Mature Secondary Structure
MEAYNVKIDTFEGPLDLLLHLIGKMEIDIVDISVAEVTDQYVGYIRTMQKFELDVASEYL
CCCEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLQLKSKQLLPPVPVEDEEVPDFSEEPTREGLIRQLIEYKAYKEAVVFMREQEEH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLELYTRPGEDLTTYMSEEVSKYDGPLNFSDLLHAYSKMIERKRWKERRKKTIKREERTL
HEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQMTRLHEHVSSTRQTSFFAFFVERPNVSDLVVTFMALLELIKLRIVETKQLDQDIQIS
HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FIEASKKGDEAVAVL
EEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA