Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is resE [H]

Identifier: 229916169

GI number: 229916169

Start: 400782

End: 402491

Strand: Reverse

Name: resE [H]

Synonym: EAT1b_0438

Alternate gene names: 229916169

Gene position: 402491-400782 (Counterclockwise)

Preceding gene: 229916170

Following gene: 229916168

Centisome position: 13.42

GC content: 50.58

Gene sequence:

>1710_bases
ATGATGATTCGTCGAAACAGCATCGTCACGAAACTGTGGCTGACGATTCTCGTTTTGGTCAGTGTCATCTTATTCATCGT
CTCGGTGTTGATGCTTGAATTTTTTAATTCCTTTCATATCGACCAGGAACGAGGCCATCTTGCCAAGCTCGGTGGACAGG
TCCAATCGGTTTTGTTGAATGAAGGTGACACGTCCCAGACGATTGATCAAATCATCGAAGTGTACGGGGCTAACTATATC
TTAGAGAACGGGACGACCCGATCGAATTTTGGAAATCAAGTGGATGGCTTGATGGTGGAACTTGAACGACAGGATTGGGA
AACTTATCAGGCGGTCGGTGAGACGGCCATCGGAAATTTCTCATCTTTTGACGACCAGGCCGCGCTAGCGTATCGGACGA
CGTTCTCCTTATCGACGGGCCAATATACGCTCTACCTGTTTGAACCGCTCGATGCAATCTCGAGTGCGAACGCCGGTGCG
CGAACCATCATTCTTTGGACCGTCGCGTCGGCCATCATCGTCACGACCGTCTTTGCTTTCTTCTTGTCGACACGAATCAC
GGCACCGCTCCGAGCGATGCGGGACGCGGTCAATAAGACGGGAGAGGGGCAATTTGATTTACGTTTGGAGACGAAGACAC
GGGATGAGATTGGCGAACTCGCGGCATCCTTCAATGCGATGAGCAGTCAGCTTTCAAAATATGTGAATGCGCTTGACCGC
GAACGGTTGCAGCTCGCGTCGATTCTTCGTTCGATGGCAGACGGTGTCATCACACTCGATCGTCATGCGAACGTGATTGT
CACGAACCCGCAAGCCAGTCCATTACTTCAAGACGGGCAACCACATGAGGTCGTATTGTCTCTTTATGAGGAAGTGATGG
AAGGGACCTCTGAAAAGACGATCGAAGTGAAACAGGATGAGCGGTACTATACACTGACAGTCACACCACTCGTCGGAGAA
GACGATTTCGAGGGTGCTGTCGTGGTCATCCGGGATACGTCAGAAAGTCATCGACTCGATAAGATGCGGACCGATTTTGT
GGCGAACATTAGCCATGAACTCCGGACACCGCTCGTGACGCTTCAAGGGTATTCAGAGGCAATCATCGATGGCATTACTG
AGAGCGACGAGGCGACGAAAGAGTTCGCCTCTATCATCTACGATGAATCGCTCCGCTTGGCAAGACTCGTCAATGATTTG
TTGGATTTGGCACGCATCGAATCGGGTAAAGAGACGATGCATTTCACTTCGTTTGATATCGGTGATTTCTTGCCCCGAGT
CATGCGAAAGTTCAATCAGATGGCATCTGAAAAAGAGATTCGTTTACAGACCGACGCCCCGCACCGTCTCATCGAGGCGG
ATGGCGATCGTCTCGAGCAAGTGTTCACCAACTTGATTGGCAATGCTATCGCGCATACCGATTCTGGAGAAATTCGGATT
GAGGCCACAGAAGAGACGGACGGGCTACGGATTCAGTTGACGGATACAGGTCACGGAATTCCAAAAGAGGATTTGCCGTT
CGTTTTCGAGCGATTCTATAAAGCCGATAAAGCCCGGACCAGTGGTTCGAAGACAGGGACAGGCATCGGACTCGCGATCG
TGAAGAATGTGGTCGATGCCCATCACGGAAAAGTGAGCGTATCGAGTACACTCGGGGTCGGAACCACCTTCGAGATTTAC
TTACCATTTGAACAACCACACAACTCGTAA

Upstream 100 bases:

>100_bases
TGAAACGTCTTCGTGAGAAATTGAATCGTGTCTCACCGGACGCGGCGCATATGATCACGACCGTATGGGGTGTCGGGTAC
AAGTTCGAAGCTGCCAGTGA

Downstream 100 bases:

>100_bases
TGGTGACTCGCTTGAGTCACCATTTGTGGCATTTTAAGGGGGGAGTCGAATGAAACGTTATACACGAACGGGCGACAAGG
GTGAAACATCATTAATCGGT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI
LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA
RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR
ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE
DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL
LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI
EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY
LPFEQPHNS

Sequences:

>Translated_569_residues
MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI
LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA
RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR
ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE
DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL
LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI
EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY
LPFEQPHNS
>Mature_569_residues
MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI
LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA
RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR
ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE
DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL
LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI
EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY
LPFEQPHNS

Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=419, Percent_Identity=27.2076372315036, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=34.3612334801762, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=31.4159292035398, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=32.7272727272727, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788713, Length=230, Percent_Identity=29.5652173913043, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=32.6086956521739, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=31.25, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=30.8035714285714, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=31.4410480349345, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87081816, Length=236, Percent_Identity=29.6610169491525, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1788549, Length=387, Percent_Identity=23.7726098191214, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1790861, Length=203, Percent_Identity=32.512315270936, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI87082128, Length=226, Percent_Identity=26.1061946902655, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=29.7413793103448, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790300, Length=368, Percent_Identity=23.3695652173913, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787894, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788279, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789808, Length=220, Percent_Identity=26.8181818181818, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 63329; Mature: 63329

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
EGDTSQTIDQIIEVYGANYILENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNF
CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC
SSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGARTIILWTVASAIIVTTVFAF
CCCCCCHHEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
FLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKT
HHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
IEVKQDERYYTLTVTPLVGEDDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVT
EEEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEE
LQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDLLDLARIESGKETMHFTSFDI
ECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
GDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEE
EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDA
EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HHGKVSVSSTLGVGTTFEIYLPFEQPHNS
CCCCEEECCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
EGDTSQTIDQIIEVYGANYILENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNF
CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC
SSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGARTIILWTVASAIIVTTVFAF
CCCCCCHHEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
FLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKT
HHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
IEVKQDERYYTLTVTPLVGEDDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVT
EEEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEE
LQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDLLDLARIESGKETMHFTSFDI
ECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
GDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEE
EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDA
EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HHGKVSVSSTLGVGTTFEIYLPFEQPHNS
CCCCEEECCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715 [H]