| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is resE [H]
Identifier: 229916169
GI number: 229916169
Start: 400782
End: 402491
Strand: Reverse
Name: resE [H]
Synonym: EAT1b_0438
Alternate gene names: 229916169
Gene position: 402491-400782 (Counterclockwise)
Preceding gene: 229916170
Following gene: 229916168
Centisome position: 13.42
GC content: 50.58
Gene sequence:
>1710_bases ATGATGATTCGTCGAAACAGCATCGTCACGAAACTGTGGCTGACGATTCTCGTTTTGGTCAGTGTCATCTTATTCATCGT CTCGGTGTTGATGCTTGAATTTTTTAATTCCTTTCATATCGACCAGGAACGAGGCCATCTTGCCAAGCTCGGTGGACAGG TCCAATCGGTTTTGTTGAATGAAGGTGACACGTCCCAGACGATTGATCAAATCATCGAAGTGTACGGGGCTAACTATATC TTAGAGAACGGGACGACCCGATCGAATTTTGGAAATCAAGTGGATGGCTTGATGGTGGAACTTGAACGACAGGATTGGGA AACTTATCAGGCGGTCGGTGAGACGGCCATCGGAAATTTCTCATCTTTTGACGACCAGGCCGCGCTAGCGTATCGGACGA CGTTCTCCTTATCGACGGGCCAATATACGCTCTACCTGTTTGAACCGCTCGATGCAATCTCGAGTGCGAACGCCGGTGCG CGAACCATCATTCTTTGGACCGTCGCGTCGGCCATCATCGTCACGACCGTCTTTGCTTTCTTCTTGTCGACACGAATCAC GGCACCGCTCCGAGCGATGCGGGACGCGGTCAATAAGACGGGAGAGGGGCAATTTGATTTACGTTTGGAGACGAAGACAC GGGATGAGATTGGCGAACTCGCGGCATCCTTCAATGCGATGAGCAGTCAGCTTTCAAAATATGTGAATGCGCTTGACCGC GAACGGTTGCAGCTCGCGTCGATTCTTCGTTCGATGGCAGACGGTGTCATCACACTCGATCGTCATGCGAACGTGATTGT CACGAACCCGCAAGCCAGTCCATTACTTCAAGACGGGCAACCACATGAGGTCGTATTGTCTCTTTATGAGGAAGTGATGG AAGGGACCTCTGAAAAGACGATCGAAGTGAAACAGGATGAGCGGTACTATACACTGACAGTCACACCACTCGTCGGAGAA GACGATTTCGAGGGTGCTGTCGTGGTCATCCGGGATACGTCAGAAAGTCATCGACTCGATAAGATGCGGACCGATTTTGT GGCGAACATTAGCCATGAACTCCGGACACCGCTCGTGACGCTTCAAGGGTATTCAGAGGCAATCATCGATGGCATTACTG AGAGCGACGAGGCGACGAAAGAGTTCGCCTCTATCATCTACGATGAATCGCTCCGCTTGGCAAGACTCGTCAATGATTTG TTGGATTTGGCACGCATCGAATCGGGTAAAGAGACGATGCATTTCACTTCGTTTGATATCGGTGATTTCTTGCCCCGAGT CATGCGAAAGTTCAATCAGATGGCATCTGAAAAAGAGATTCGTTTACAGACCGACGCCCCGCACCGTCTCATCGAGGCGG ATGGCGATCGTCTCGAGCAAGTGTTCACCAACTTGATTGGCAATGCTATCGCGCATACCGATTCTGGAGAAATTCGGATT GAGGCCACAGAAGAGACGGACGGGCTACGGATTCAGTTGACGGATACAGGTCACGGAATTCCAAAAGAGGATTTGCCGTT CGTTTTCGAGCGATTCTATAAAGCCGATAAAGCCCGGACCAGTGGTTCGAAGACAGGGACAGGCATCGGACTCGCGATCG TGAAGAATGTGGTCGATGCCCATCACGGAAAAGTGAGCGTATCGAGTACACTCGGGGTCGGAACCACCTTCGAGATTTAC TTACCATTTGAACAACCACACAACTCGTAA
Upstream 100 bases:
>100_bases TGAAACGTCTTCGTGAGAAATTGAATCGTGTCTCACCGGACGCGGCGCATATGATCACGACCGTATGGGGTGTCGGGTAC AAGTTCGAAGCTGCCAGTGA
Downstream 100 bases:
>100_bases TGGTGACTCGCTTGAGTCACCATTTGTGGCATTTTAAGGGGGGAGTCGAATGAAACGTTATACACGAACGGGCGACAAGG GTGAAACATCATTAATCGGT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY LPFEQPHNS
Sequences:
>Translated_569_residues MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY LPFEQPHNS >Mature_569_residues MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLNEGDTSQTIDQIIEVYGANYI LENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNFSSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGA RTIILWTVASAIIVTTVFAFFLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKTIEVKQDERYYTLTVTPLVGE DDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVTLQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDL LDLARIESGKETMHFTSFDIGDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDAHHGKVSVSSTLGVGTTFEIY LPFEQPHNS
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=419, Percent_Identity=27.2076372315036, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=34.3612334801762, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=31.4159292035398, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=32.7272727272727, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788713, Length=230, Percent_Identity=29.5652173913043, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=32.6086956521739, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=31.25, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=30.8035714285714, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=31.4410480349345, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI87081816, Length=236, Percent_Identity=29.6610169491525, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1788549, Length=387, Percent_Identity=23.7726098191214, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1790861, Length=203, Percent_Identity=32.512315270936, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI87082128, Length=226, Percent_Identity=26.1061946902655, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=29.7413793103448, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790300, Length=368, Percent_Identity=23.3695652173913, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787894, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788279, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789808, Length=220, Percent_Identity=26.8181818181818, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63329; Mature: 63329
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLN CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC EGDTSQTIDQIIEVYGANYILENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNF CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC SSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGARTIILWTVASAIIVTTVFAF CCCCCCHHEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH FLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKT HHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE IEVKQDERYYTLTVTPLVGEDDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVT EEEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEE LQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDLLDLARIESGKETMHFTSFDI ECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH GDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEE EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDA EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH HHGKVSVSSTLGVGTTFEIYLPFEQPHNS CCCCEEECCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MMIRRNSIVTKLWLTILVLVSVILFIVSVLMLEFFNSFHIDQERGHLAKLGGQVQSVLLN CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC EGDTSQTIDQIIEVYGANYILENGTTRSNFGNQVDGLMVELERQDWETYQAVGETAIGNF CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCC SSFDDQAALAYRTTFSLSTGQYTLYLFEPLDAISSANAGARTIILWTVASAIIVTTVFAF CCCCCCHHEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH FLSTRITAPLRAMRDAVNKTGEGQFDLRLETKTRDEIGELAASFNAMSSQLSKYVNALDR HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERLQLASILRSMADGVITLDRHANVIVTNPQASPLLQDGQPHEVVLSLYEEVMEGTSEKT HHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE IEVKQDERYYTLTVTPLVGEDDFEGAVVVIRDTSESHRLDKMRTDFVANISHELRTPLVT EEEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEE LQGYSEAIIDGITESDEATKEFASIIYDESLRLARLVNDLLDLARIESGKETMHFTSFDI ECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH GDFLPRVMRKFNQMASEKEIRLQTDAPHRLIEADGDRLEQVFTNLIGNAIAHTDSGEIRI HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEE EATEETDGLRIQLTDTGHGIPKEDLPFVFERFYKADKARTSGSKTGTGIGLAIVKNVVDA EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH HHGKVSVSSTLGVGTTFEIYLPFEQPHNS CCCCEEECCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]