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The map label for this gene is glnR [H]

Identifier: 229916143

GI number: 229916143

Start: 375310

End: 375714

Strand: Reverse

Name: glnR [H]

Synonym: EAT1b_0412

Alternate gene names: 229916143

Gene position: 375714-375310 (Counterclockwise)

Preceding gene: 229916144

Following gene: 229916142

Centisome position: 12.52

GC content: 46.17

Gene sequence:

>405_bases
ATGGCCGATCAATTTCGTCGCTCCAACCCGTTGTTTCCGATTGGAATCGTCCAAGATTTGACGCAACTGACAGGTAGGCA
GATTCGGTATTACGAAGAACAGGGTCTGATTTCGCCTAGTCGGACGGAATCGAAACGACGACTTTATTCCTTTAATGATG
TCGAACGTCTACTCGCAATCAAGGATTACATTGACCAAGGCTTTAACTTGGCGGCGATTCGCCACATGTTAGAGCAAGAA
GGTGAAAAAGAAACGGAAGCATCTGCTCCGGCCGCACCGGTCAATGAAGCACCGAAGGTTTCGGAAAAAGAGTTACATCA
TTTGTTGAAAACACAGCTTCAAGAAGCCGGTCGTTTCAATAAGACGTCGCTCATTCAAGGTGAGCTTTCACGTTTCTATC
GATAA

Upstream 100 bases:

>100_bases
ATTTGTAACCAATCTGTCATGTTAACTTTCTTAACATCTATTGACAGGATTGTTGTCATATATTATTCTCACATTGTGAG
ACAGAAAAGGAGGGGTAAGG

Downstream 100 bases:

>100_bases
CGCCGCACACATCAACCATTACGCAATGTGAGAGGGGACATTTTACCATGGCCAGAAAAACGTTCACAAAAGAAGACATT
AAACGCATCGCACAAGAGGA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MADQFRRSNPLFPIGIVQDLTQLTGRQIRYYEEQGLISPSRTESKRRLYSFNDVERLLAIKDYIDQGFNLAAIRHMLEQE
GEKETEASAPAAPVNEAPKVSEKELHHLLKTQLQEAGRFNKTSLIQGELSRFYR

Sequences:

>Translated_134_residues
MADQFRRSNPLFPIGIVQDLTQLTGRQIRYYEEQGLISPSRTESKRRLYSFNDVERLLAIKDYIDQGFNLAAIRHMLEQE
GEKETEASAPAAPVNEAPKVSEKELHHLLKTQLQEAGRFNKTSLIQGELSRFYR
>Mature_133_residues
ADQFRRSNPLFPIGIVQDLTQLTGRQIRYYEEQGLISPSRTESKRRLYSFNDVERLLAIKDYIDQGFNLAAIRHMLEQEG
EKETEASAPAAPVNEAPKVSEKELHHLLKTQLQEAGRFNKTSLIQGELSRFYR

Specific function: Repressor for the glnRA operon. Binds specifically to the promoter region of the glnRA operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15480; Mature: 15349

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQFRRSNPLFPIGIVQDLTQLTGRQIRYYEEQGLISPSRTESKRRLYSFNDVERLLAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH
KDYIDQGFNLAAIRHMLEQEGEKETEASAPAAPVNEAPKVSEKELHHLLKTQLQEAGRFN
HHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KTSLIQGELSRFYR
CHHHHHHHHHHHCC
>Mature Secondary Structure 
ADQFRRSNPLFPIGIVQDLTQLTGRQIRYYEEQGLISPSRTESKRRLYSFNDVERLLAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH
KDYIDQGFNLAAIRHMLEQEGEKETEASAPAAPVNEAPKVSEKELHHLLKTQLQEAGRFN
HHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KTSLIQGELSRFYR
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]