| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916136
Identifier: 229916136
GI number: 229916136
Start: 370256
End: 370489
Strand: Reverse
Name: 229916136
Synonym: EAT1b_0405
Alternate gene names: NA
Gene position: 370489-370256 (Counterclockwise)
Preceding gene: 229916137
Following gene: 229916135
Centisome position: 12.35
GC content: 44.87
Gene sequence:
>234_bases ATGTTAGCACCAGGACAATTGGAGCGAATCAATTTCCTCGCCAACAAAGCGAAGACAGAAGGACTGTCTCAAGACGAAAT GAACGAACAGCAAAACTTGCGTCAAGAATATTTGAAGGCGTTTCGTCAATCGTTCAAATCACAAATGATGGGGATGAAAG TCGTCGACCCAGATGGGAACGACGTTACCCCAGAGAAGTTGAAAGAAGACCAAAAACGTTATCGCGGTGAGTGA
Upstream 100 bases:
>100_bases TCGACGTTATCTCGAGCACCAGTCAGTGGCTGAAACTTGATTCTTCCTCTCTGATTTTGTAAAGTATAAGAACAAATTCA CTAGAGAGGGGGCGAGTCAG
Downstream 100 bases:
>100_bases TCCCGAATGCACATCCTATTTCGTATAGGATGTGCATTTTTGTTATACACGAACACGCATCAGACGAACGGATTACACAT TATTTCATGCAATAGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MLAPGQLERINFLANKAKTEGLSQDEMNEQQNLRQEYLKAFRQSFKSQMMGMKVVDPDGNDVTPEKLKEDQKRYRGE
Sequences:
>Translated_77_residues MLAPGQLERINFLANKAKTEGLSQDEMNEQQNLRQEYLKAFRQSFKSQMMGMKVVDPDGNDVTPEKLKEDQKRYRGE >Mature_77_residues MLAPGQLERINFLANKAKTEGLSQDEMNEQQNLRQEYLKAFRQSFKSQMMGMKVVDPDGNDVTPEKLKEDQKRYRGE
Specific function: Unknown
COG id: COG4224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0291 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y405_EXISA (C4L2S9)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002884782.1 - ProteinModelPortal: C4L2S9 - GeneID: 7869213 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0405 - OMA: TIENTTI - GO: GO:0005737 - HAMAP: MF_01103 - InterPro: IPR009242 - InterPro: IPR023218 - Gene3D: G3DSA:1.10.287.540
Pfam domain/function: PF05979 DUF896
EC number: NA
Molecular weight: Translated: 8979; Mature: 8979
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPGQLERINFLANKAKTEGLSQDEMNEQQNLRQEYLKAFRQSFKSQMMGMKVVDPDGN CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DVTPEKLKEDQKRYRGE CCCHHHHHHHHHHHCCC >Mature Secondary Structure MLAPGQLERINFLANKAKTEGLSQDEMNEQQNLRQEYLKAFRQSFKSQMMGMKVVDPDGN CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DVTPEKLKEDQKRYRGE CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA