| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yneK [H]
Identifier: 229916126
GI number: 229916126
Start: 359847
End: 360278
Strand: Direct
Name: yneK [H]
Synonym: EAT1b_0395
Alternate gene names: 229916126
Gene position: 359847-360278 (Clockwise)
Preceding gene: 229916113
Following gene: 229916127
Centisome position: 12.0
GC content: 45.37
Gene sequence:
>432_bases ATGCCAGAAAACTTGATGATGTATTTCATTGTATTCTGGGGATTCGTCATGATTGGACTCATGACGATTGGCGGGTACTT CATGTTTCGTAAGTTTTTAAAACGAATGCCAAAAGAAGATGGACGTTCCCTACTTGACATCGAAGATGATTATATAGAAA GAACGCGTCATCTATGGACTCCGGAAACGCGGACGTTATTAGATCGTCTCGTCACACCGGTACCCGAGTTGTTCCGCGAC GTCGCGATCCGAAAAATCGCAGGTAAAATCGGTCAATTCGCGCTTGAAACGCGAGCCAAAAAAATGACGACCGAACTCGT GGTAAAGGGTTATATCGCCGCGACACCTAAGCGCGATCATAAGTTCTTAAAAAAAGCGCTAGCCGAAGAACAGATCGACT GGACGCCATACGAACACTATTTTCAGCAGTAG
Upstream 100 bases:
>100_bases CCGTTCGTCTATCCTAATGGAACGTACGCCTTTTGCAAATGGATTCTTTTTTGTATACTAACGATGAAAGCAAGTGAATG TATAGAACGGGGGAAAGACG
Downstream 100 bases:
>100_bases ACTCTATCTCATTCAGATAGAGTTTTTTGTTTGTCGAATTGTGCGATTCGCCTAATGGGTCAAAAGTACCTTTTCTTGAG TTTTATACTACACCGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPENLMMYFIVFWGFVMIGLMTIGGYFMFRKFLKRMPKEDGRSLLDIEDDYIERTRHLWTPETRTLLDRLVTPVPELFRD VAIRKIAGKIGQFALETRAKKMTTELVVKGYIAATPKRDHKFLKKALAEEQIDWTPYEHYFQQ
Sequences:
>Translated_143_residues MPENLMMYFIVFWGFVMIGLMTIGGYFMFRKFLKRMPKEDGRSLLDIEDDYIERTRHLWTPETRTLLDRLVTPVPELFRD VAIRKIAGKIGQFALETRAKKMTTELVVKGYIAATPKRDHKFLKKALAEEQIDWTPYEHYFQQ >Mature_142_residues PENLMMYFIVFWGFVMIGLMTIGGYFMFRKFLKRMPKEDGRSLLDIEDDYIERTRHLWTPETRTLLDRLVTPVPELFRDV AIRKIAGKIGQFALETRAKKMTTELVVKGYIAATPKRDHKFLKKALAEEQIDWTPYEHYFQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020203 - ProDom: PD086666 [H]
Pfam domain/function: PF11084 DUF2621 [H]
EC number: NA
Molecular weight: Translated: 17026; Mature: 16895
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENLMMYFIVFWGFVMIGLMTIGGYFMFRKFLKRMPKEDGRSLLDIEDDYIERTRHLWT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCC PETRTLLDRLVTPVPELFRDVAIRKIAGKIGQFALETRAKKMTTELVVKGYIAATPKRDH CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KFLKKALAEEQIDWTPYEHYFQQ HHHHHHHHHHCCCCCHHHHHHCC >Mature Secondary Structure PENLMMYFIVFWGFVMIGLMTIGGYFMFRKFLKRMPKEDGRSLLDIEDDYIERTRHLWT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCC PETRTLLDRLVTPVPELFRDVAIRKIAGKIGQFALETRAKKMTTELVVKGYIAATPKRDH CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KFLKKALAEEQIDWTPYEHYFQQ HHHHHHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377; 9068642 [H]