| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916103
Identifier: 229916103
GI number: 229916103
Start: 333860
End: 334801
Strand: Direct
Name: 229916103
Synonym: EAT1b_0372
Alternate gene names: NA
Gene position: 333860-334801 (Clockwise)
Preceding gene: 229916102
Following gene: 229916104
Centisome position: 11.13
GC content: 43.84
Gene sequence:
>942_bases GTGGGAATTCTGTATGAAAGAATCGATGTCGTTGGATGGGGAATTGGGTTATTTGTCTTGTTTAGCTTGATGGCTTTCAA TGAATTCAGTCGCACGACTAAGTGGGGAGGAATAACGTTATTTTTGATTGTCCCGACTATACTGACCCTTTATGTTTGGC CGACTACCGCAGCACCAGGGAATGAATATGGAACGGGTACATGGTTCAACTGGGTGAAAACATATTCTGCTCTCGCCGGC TGTCTCGGTTTCATGATTATTCGATATCGGCCCTCGCTATTACGAAAGAAATGGGTCTTATTCTTTCCACCGGGGATTTT GGCACTGAACATTTTAGAAGCTTGTATCCGAGACTTTCAAGTATACTTCTATAACGTTCCCGATGGCGCTTATATCGATC ACCTTTGGGTCATGTCCGGACCTTGGAATCTAATGAACGGTTTTGCCGGATTATTGAACATCATCGCCATCTGCGGATGG GTTGGAATCAATATTTCGAAAGATCAATCAAAAGATATGATATGGCCCGACATGATTTGGCCATGGATCATCGCCTATGA TTTATGGAATTTTGCTTACGTTTATAATTGTATCTCTGACCACTCGTTTTATGCGGGATTGATTCTGCTCCTTTCGTGTA CCATCCCTTCTTTCTTTATTAAAAAAGGAGCTTGGTTGCAACATCGTGCCCACACGTTGGCTTTATGGATTATGTTTGTC ATGACAGTTCCCGCGTTCGCCGACCGTTTAGCTCCCGTACCGTCGACACATGACCCGAGAGCTTTCTTCATCGTCAGTCT GCTCTCCCTTTTATTCAACATGGCGCTTGTCTCCTATCAATTTTATCGGATCCGACAACGACATCTTCATCCACTCAAGG ATGAACTTTATGTTGAAACGAAGGCATATCAGACAGCTTTGAGTCAAAACGGGCTGTCTTGA
Upstream 100 bases:
>100_bases CTTCAAGAGAGCCAAAGTATCATGATGGAATCGAATATGTGAACGTATGATTTTGATTGCTCAATAGTGAACAATTAACT GATGTAAGGAGGAGATTTAA
Downstream 100 bases:
>100_bases AATAATTCTTGCCAACCCCTTCTCAACATGTTAACTTTTATATTGTTAACGTTAACTGAAAAGGGGTTTACATATGAAGA TTCAAGATATGACTCAAATC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGILYERIDVVGWGIGLFVLFSLMAFNEFSRTTKWGGITLFLIVPTILTLYVWPTTAAPGNEYGTGTWFNWVKTYSALAG CLGFMIIRYRPSLLRKKWVLFFPPGILALNILEACIRDFQVYFYNVPDGAYIDHLWVMSGPWNLMNGFAGLLNIIAICGW VGINISKDQSKDMIWPDMIWPWIIAYDLWNFAYVYNCISDHSFYAGLILLLSCTIPSFFIKKGAWLQHRAHTLALWIMFV MTVPAFADRLAPVPSTHDPRAFFIVSLLSLLFNMALVSYQFYRIRQRHLHPLKDELYVETKAYQTALSQNGLS
Sequences:
>Translated_313_residues MGILYERIDVVGWGIGLFVLFSLMAFNEFSRTTKWGGITLFLIVPTILTLYVWPTTAAPGNEYGTGTWFNWVKTYSALAG CLGFMIIRYRPSLLRKKWVLFFPPGILALNILEACIRDFQVYFYNVPDGAYIDHLWVMSGPWNLMNGFAGLLNIIAICGW VGINISKDQSKDMIWPDMIWPWIIAYDLWNFAYVYNCISDHSFYAGLILLLSCTIPSFFIKKGAWLQHRAHTLALWIMFV MTVPAFADRLAPVPSTHDPRAFFIVSLLSLLFNMALVSYQFYRIRQRHLHPLKDELYVETKAYQTALSQNGLS >Mature_312_residues GILYERIDVVGWGIGLFVLFSLMAFNEFSRTTKWGGITLFLIVPTILTLYVWPTTAAPGNEYGTGTWFNWVKTYSALAGC LGFMIIRYRPSLLRKKWVLFFPPGILALNILEACIRDFQVYFYNVPDGAYIDHLWVMSGPWNLMNGFAGLLNIIAICGWV GINISKDQSKDMIWPDMIWPWIIAYDLWNFAYVYNCISDHSFYAGLILLLSCTIPSFFIKKGAWLQHRAHTLALWIMFVM TVPAFADRLAPVPSTHDPRAFFIVSLLSLLFNMALVSYQFYRIRQRHLHPLKDELYVETKAYQTALSQNGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35991; Mature: 35860
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILYERIDVVGWGIGLFVLFSLMAFNEFSRTTKWGGITLFLIVPTILTLYVWPTTAAPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC NEYGTGTWFNWVKTYSALAGCLGFMIIRYRPSLLRKKWVLFFPPGILALNILEACIRDFQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHCE VYFYNVPDGAYIDHLWVMSGPWNLMNGFAGLLNIIAICGWVGINISKDQSKDMIWPDMIW EEEEECCCCCEEHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH PWIIAYDLWNFAYVYNCISDHSFYAGLILLLSCTIPSFFIKKGAWLQHRAHTLALWIMFV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MTVPAFADRLAPVPSTHDPRAFFIVSLLSLLFNMALVSYQFYRIRQRHLHPLKDELYVET HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KAYQTALSQNGLS HHHHHHHHHCCCC >Mature Secondary Structure GILYERIDVVGWGIGLFVLFSLMAFNEFSRTTKWGGITLFLIVPTILTLYVWPTTAAPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC NEYGTGTWFNWVKTYSALAGCLGFMIIRYRPSLLRKKWVLFFPPGILALNILEACIRDFQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHCE VYFYNVPDGAYIDHLWVMSGPWNLMNGFAGLLNIIAICGWVGINISKDQSKDMIWPDMIW EEEEECCCCCEEHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH PWIIAYDLWNFAYVYNCISDHSFYAGLILLLSCTIPSFFIKKGAWLQHRAHTLALWIMFV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MTVPAFADRLAPVPSTHDPRAFFIVSLLSLLFNMALVSYQFYRIRQRHLHPLKDELYVET HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KAYQTALSQNGLS HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA