| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229915970
Identifier: 229915970
GI number: 229915970
Start: 208192
End: 209331
Strand: Reverse
Name: 229915970
Synonym: EAT1b_0238
Alternate gene names: NA
Gene position: 209331-208192 (Counterclockwise)
Preceding gene: 229915971
Following gene: 229915969
Centisome position: 6.98
GC content: 40.88
Gene sequence:
>1140_bases TTGGTATTCGATCGTTCTCTCGATACGGAAACGACAGAACATTATGAACTACCTTATCCATATGATTTTTCACAAATAGA TTCATTTTTGAACTTTGAAATAATCAATGTTCAGTTGAAATTAGCGAAGCAATCACATGGTCAGTTCGAAGTGGAAGCAG ACTATACTTTAGTGTCGAGTACAGAAACTATTGTGTTATCGCTCTATCATCCTTACCAGGTAAAACATATCAGTGTAAAC CAGCGAGAAGTCTCGTTCCATCAAGTTGGAGATTTCATCGAGATTGAGGCTGTAACGCTCGGAGTACCAACTGCATTGTC TGTCCGATATACAATCCCAAACACAAGTCAATTCCCAATCACTAATGAAGTAACCTATCTGCCTGCTTGGTTAAACTGGT ATCCAACAAAACAATCTTATCCGAACAGCAGAATCGGGTCTGAGAACTTTAAACCTGTGATTAATCGAACGAATAGCGTA CCTGTCACGTTGCATTATTCGCCACAATCTAAGTTTTTAACAAACCTTATCGAGCAAGCTCCTGCTCATTATGAAGGTGT ACAGGCAGGGGTTACGTTGTTTGAGGGATCATTTGAAGCGTATCAAGCGGAAGATCAAGAAATAATCGTCGATCAGTCAT GGACACCACCATACTCGTATTGGCCGATTCTAAAAGAAACGCTTCAATCAATTCATGCACTCACTGAAAGAGAGTTTGGT ATATCAAGCTCCTTGCCTGATAAGATCATCCTCCTATCGCCTAATCTTGAGAAATTCAGTTACCGAGATAATCAGCATTT ACTCCTTCATGTGGGGAGTAATTTACGATTAGATCACGACCTACCAGAAGTAGTTCGAGCATACATGCCTGCCTTGTTTT GGTCACATTCAAACACAGACAGCCAAATCCAGCCGACACGAGCGGCATTCGATGATGCGATGGCTTTTTGGCTATCAGTC GAATTGAATCTCCCCTCACCGCTCGAACCAGACCCTTTCTTCTTAGAATCAATTCTTAACGGGGAGGAACTGGTCGCATC TAAAGAGCAAATATCTGAATTCATGCAATTGACTCATCAACAGCAACTCATCTTTTTGAAAAAATGGTATCGAGATTTGA ACAGTGCGTCAAAAGTATAA
Upstream 100 bases:
>100_bases GGGCAATCAGAAGGAGTCATCGTATTCAGATGACAGTCTTGGCAATTATGCTGTTCTCAGTGATTGCATCTATGCTTCTT TCGCATTAAGCCATGACCAG
Downstream 100 bases:
>100_bases GTGATTCGGAGGTACACCATGATACAAGTGGAACACATCGTGAAAAGGTACAAGAAACATATGGCTCTCGATCATGTCTC GCTAAACATTGAAGGGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MVFDRSLDTETTEHYELPYPYDFSQIDSFLNFEIINVQLKLAKQSHGQFEVEADYTLVSSTETIVLSLYHPYQVKHISVN QREVSFHQVGDFIEIEAVTLGVPTALSVRYTIPNTSQFPITNEVTYLPAWLNWYPTKQSYPNSRIGSENFKPVINRTNSV PVTLHYSPQSKFLTNLIEQAPAHYEGVQAGVTLFEGSFEAYQAEDQEIIVDQSWTPPYSYWPILKETLQSIHALTEREFG ISSSLPDKIILLSPNLEKFSYRDNQHLLLHVGSNLRLDHDLPEVVRAYMPALFWSHSNTDSQIQPTRAAFDDAMAFWLSV ELNLPSPLEPDPFFLESILNGEELVASKEQISEFMQLTHQQQLIFLKKWYRDLNSASKV
Sequences:
>Translated_379_residues MVFDRSLDTETTEHYELPYPYDFSQIDSFLNFEIINVQLKLAKQSHGQFEVEADYTLVSSTETIVLSLYHPYQVKHISVN QREVSFHQVGDFIEIEAVTLGVPTALSVRYTIPNTSQFPITNEVTYLPAWLNWYPTKQSYPNSRIGSENFKPVINRTNSV PVTLHYSPQSKFLTNLIEQAPAHYEGVQAGVTLFEGSFEAYQAEDQEIIVDQSWTPPYSYWPILKETLQSIHALTEREFG ISSSLPDKIILLSPNLEKFSYRDNQHLLLHVGSNLRLDHDLPEVVRAYMPALFWSHSNTDSQIQPTRAAFDDAMAFWLSV ELNLPSPLEPDPFFLESILNGEELVASKEQISEFMQLTHQQQLIFLKKWYRDLNSASKV >Mature_379_residues MVFDRSLDTETTEHYELPYPYDFSQIDSFLNFEIINVQLKLAKQSHGQFEVEADYTLVSSTETIVLSLYHPYQVKHISVN QREVSFHQVGDFIEIEAVTLGVPTALSVRYTIPNTSQFPITNEVTYLPAWLNWYPTKQSYPNSRIGSENFKPVINRTNSV PVTLHYSPQSKFLTNLIEQAPAHYEGVQAGVTLFEGSFEAYQAEDQEIIVDQSWTPPYSYWPILKETLQSIHALTEREFG ISSSLPDKIILLSPNLEKFSYRDNQHLLLHVGSNLRLDHDLPEVVRAYMPALFWSHSNTDSQIQPTRAAFDDAMAFWLSV ELNLPSPLEPDPFFLESILNGEELVASKEQISEFMQLTHQQQLIFLKKWYRDLNSASKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43617; Mature: 43617
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFDRSLDTETTEHYELPYPYDFSQIDSFLNFEIINVQLKLAKQSHGQFEVEADYTLVSS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEECCCCCEEEEECEEEEEC TETIVLSLYHPYQVKHISVNQREVSFHQVGDFIEIEAVTLGVPTALSVRYTIPNTSQFPI CCEEEEEEECCEEEEEEECCCCEEHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCC TNEVTYLPAWLNWYPTKQSYPNSRIGSENFKPVINRTNSVPVTLHYSPQSKFLTNLIEQA CCCEEEEEHHHEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHC PAHYEGVQAGVTLFEGSFEAYQAEDQEIIVDQSWTPPYSYWPILKETLQSIHALTEREFG CCHHCCHHHCEEEEECCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC ISSSLPDKIILLSPNLEKFSYRDNQHLLLHVGSNLRLDHDLPEVVRAYMPALFWSHSNTD CCCCCCCEEEEECCCCHHCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCC SQIQPTRAAFDDAMAFWLSVELNLPSPLEPDPFFLESILNGEELVASKEQISEFMQLTHQ CCCCCHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QQLIFLKKWYRDLNSASKV HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVFDRSLDTETTEHYELPYPYDFSQIDSFLNFEIINVQLKLAKQSHGQFEVEADYTLVSS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEEEEEECCCCCEEEEECEEEEEC TETIVLSLYHPYQVKHISVNQREVSFHQVGDFIEIEAVTLGVPTALSVRYTIPNTSQFPI CCEEEEEEECCEEEEEEECCCCEEHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCC TNEVTYLPAWLNWYPTKQSYPNSRIGSENFKPVINRTNSVPVTLHYSPQSKFLTNLIEQA CCCEEEEEHHHEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHC PAHYEGVQAGVTLFEGSFEAYQAEDQEIIVDQSWTPPYSYWPILKETLQSIHALTEREFG CCHHCCHHHCEEEEECCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC ISSSLPDKIILLSPNLEKFSYRDNQHLLLHVGSNLRLDHDLPEVVRAYMPALFWSHSNTD CCCCCCCEEEEECCCCHHCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCC SQIQPTRAAFDDAMAFWLSVELNLPSPLEPDPFFLESILNGEELVASKEQISEFMQLTHQ CCCCCHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QQLIFLKKWYRDLNSASKV HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA