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The map label for this gene is ydaK [H]

Identifier: 229915940

GI number: 229915940

Start: 181273

End: 182088

Strand: Reverse

Name: ydaK [H]

Synonym: EAT1b_0208

Alternate gene names: 229915940

Gene position: 182088-181273 (Counterclockwise)

Preceding gene: 229915944

Following gene: 229915932

Centisome position: 6.07

GC content: 42.77

Gene sequence:

>816_bases
ATGAGACTCTGGACAACGATGTCACTACAACTGATCGCACTCATCGTTGTATCGTTGGCATGTAGTATTCTATTTTCCTC
TCTGCTGATCATGAATCATCTACCTGTTTGGTGGATGATCTGTATTCCGATTCTTTATCTTTCCACGTTGCTCATTCATC
GCGGATCTAGTGTATTCATTCTGTTCGGATTCGCAGCTTACTTTTTAATCACCATGCCTGTGTATGCGACTGCCGCTACT
GCGCAACTGTATATTTTATTACTATTTGCGGTTTTAACGGGTCTGTCTTACTGGCTTCAAGTCATCCTGTTCCATGCCCA
GTTTGCACTAAAGGTTGCGGAAGCGAGAGTCAGTCAGTTGATTGCGGTAGACCCGGAGACCGGTTTTGATAACCGAGATC
GTTTTTTGATGGATATAGAGGCTGAACGGGATCGGTTGATTCGCCACGGTGAGACCTTCGTGGTTTCATTCATCACATTG
CCCATTCTCAATCATTTTGAAAAACGGTATGGTTCATCCGAATATGAGTGGTTTTTAGACTATTTTAGTGACGAACTTCA
CGAAGCGACTCGACGAACGGACAAGAAGTATCGGGTGGCGCAAGACACATTCGCCATGATTTTCCCTCGAACCTCAATTG
ATAATGCACATATTGTACATGAACGAATCAGACCACTATTATTAGAGTATTCACGTCAAAACGGTGATTCGCTCACTGTT
GAATGCTCAGACAAATCGTTTGAGGTGAACTTGGAGAACGCAACCATACGATTAGAAGAAATTTATCGGTATGTCGAATC
AAAGACTAAAAAATGA

Upstream 100 bases:

>100_bases
TAATGAATCAAGTGTTCGAATCGGTTTGAACAATCACTATTTCGGAAAATGGATAATAGTGTAACTATTTCAATTTATTT
CTTTTAAGAGGAGGATACCT

Downstream 100 bases:

>100_bases
GTTCAATCGTGAACTCATTTTTTGATGGAGTGAATATGAAATTCGAGTTTCTCATCCATTTCGACGATGTATTGTTGATC
AAGTACCATCTGAATCGGGC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRLWTTMSLQLIALIVVSLACSILFSSLLIMNHLPVWWMICIPILYLSTLLIHRGSSVFILFGFAAYFLITMPVYATAAT
AQLYILLLFAVLTGLSYWLQVILFHAQFALKVAEARVSQLIAVDPETGFDNRDRFLMDIEAERDRLIRHGETFVVSFITL
PILNHFEKRYGSSEYEWFLDYFSDELHEATRRTDKKYRVAQDTFAMIFPRTSIDNAHIVHERIRPLLLEYSRQNGDSLTV
ECSDKSFEVNLENATIRLEEIYRYVESKTKK

Sequences:

>Translated_271_residues
MRLWTTMSLQLIALIVVSLACSILFSSLLIMNHLPVWWMICIPILYLSTLLIHRGSSVFILFGFAAYFLITMPVYATAAT
AQLYILLLFAVLTGLSYWLQVILFHAQFALKVAEARVSQLIAVDPETGFDNRDRFLMDIEAERDRLIRHGETFVVSFITL
PILNHFEKRYGSSEYEWFLDYFSDELHEATRRTDKKYRVAQDTFAMIFPRTSIDNAHIVHERIRPLLLEYSRQNGDSLTV
ECSDKSFEVNLENATIRLEEIYRYVESKTKK
>Mature_271_residues
MRLWTTMSLQLIALIVVSLACSILFSSLLIMNHLPVWWMICIPILYLSTLLIHRGSSVFILFGFAAYFLITMPVYATAAT
AQLYILLLFAVLTGLSYWLQVILFHAQFALKVAEARVSQLIAVDPETGFDNRDRFLMDIEAERDRLIRHGETFVVSFITL
PILNHFEKRYGSSEYEWFLDYFSDELHEATRRTDKKYRVAQDTFAMIFPRTSIDNAHIVHERIRPLLLEYSRQNGDSLTV
ECSDKSFEVNLENATIRLEEIYRYVESKTKK

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 31555; Mature: 31555

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWTTMSLQLIALIVVSLACSILFSSLLIMNHLPVWWMICIPILYLSTLLIHRGSSVFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
LFGFAAYFLITMPVYATAATAQLYILLLFAVLTGLSYWLQVILFHAQFALKVAEARVSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVDPETGFDNRDRFLMDIEAERDRLIRHGETFVVSFITLPILNHFEKRYGSSEYEWFLD
EEECCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YFSDELHEATRRTDKKYRVAQDTFAMIFPRTSIDNAHIVHERIRPLLLEYSRQNGDSLTV
HHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
ECSDKSFEVNLENATIRLEEIYRYVESKTKK
EECCCEEEEEECCCEEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLWTTMSLQLIALIVVSLACSILFSSLLIMNHLPVWWMICIPILYLSTLLIHRGSSVFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
LFGFAAYFLITMPVYATAATAQLYILLLFAVLTGLSYWLQVILFHAQFALKVAEARVSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVDPETGFDNRDRFLMDIEAERDRLIRHGETFVVSFITLPILNHFEKRYGSSEYEWFLD
EEECCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YFSDELHEATRRTDKKYRVAQDTFAMIFPRTSIDNAHIVHERIRPLLLEYSRQNGDSLTV
HHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
ECSDKSFEVNLENATIRLEEIYRYVESKTKK
EECCCEEEEEECCCEEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]