Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yeeN [C]

Identifier: 229915886

GI number: 229915886

Start: 129254

End: 129967

Strand: Reverse

Name: yeeN [C]

Synonym: EAT1b_0153

Alternate gene names: 229915886

Gene position: 129967-129254 (Counterclockwise)

Preceding gene: 229915887

Following gene: 229915885

Centisome position: 4.33

GC content: 50.0

Gene sequence:

>714_bases
ATGGGTCGTAAATGGAACAACATTAAAGAGAAGAAGGCGTCAAAAGATGCGAACACGAGTCGCGTCTATGCGAAGTTTGG
TCGCGAGATTTATGTGGCCGCCCGTCAAGGGGAACCTGATCCTGAGTTGAACCAGTCATTAAAATTCGTGGTGGAGCGTG
CGAAGACGTATAACGTGCCCCGGGCAATCATCGATCGTGCCATCGACAAAGCCAAAGGTGGCGATGAGGAAAACTTCGAT
GAGCTTCGATATGAAGGGTTTGGTCCGAATGGTTCGATGGTCATCGTCGATACATTGACGAATAACGTCAACCGTACGGC
TTCAGAAGTCCGTGCCGCTTTCGGTAAAAACGGAGGCAACATGGGAGTCAGTGGTTCGGTCGCATATATGTTCGATGCAA
CTGCCGTCATCGGTGTCAATGAGATGTCGGCAGATGACGTCCTCGAACTGATGATGGAGCATGACCTTGATGTGCGTGAT
GTTATCGAGGAAGACGAGACGGTCATCGTCTATGCAGAGCCAGAAGCGTTCCACGCCGTTCAGACTGCATTCAAGGCTGC
CGGAGTAGAAGAGTTTGCCGTTGCGGAATTGACGATGCTCCCGCAGAACGAAGTGTCACTCGATGACGCTTCGCAAGAAC
AGTTTGAAAAATTAATCGATGTGCTCGAAGACTTGGAAGATGTGCGCCAAGTGTATCATAACGTCGAGATGTAA

Upstream 100 bases:

>100_bases
TGGACAAAGGTGACGAGTAAAACTTTTCTCGTCAATTCCCGCAACTTCTTATATAATCTGTAATGAATCTACGTACAAAT
GGAAAGAGAGATGACATGTA

Downstream 100 bases:

>100_bases
CACGTAAGCGATAACTTTCACGAGTTATCGCTTTTTTCATATTCGATTTGACAAGGGTCACATCATATGTTAAATTTCAA
AAAGTCTTTATCATATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGRKWNNIKEKKASKDANTSRVYAKFGREIYVAARQGEPDPELNQSLKFVVERAKTYNVPRAIIDRAIDKAKGGDEENFD
ELRYEGFGPNGSMVIVDTLTNNVNRTASEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVNEMSADDVLELMMEHDLDVRD
VIEEDETVIVYAEPEAFHAVQTAFKAAGVEEFAVAELTMLPQNEVSLDDASQEQFEKLIDVLEDLEDVRQVYHNVEM

Sequences:

>Translated_237_residues
MGRKWNNIKEKKASKDANTSRVYAKFGREIYVAARQGEPDPELNQSLKFVVERAKTYNVPRAIIDRAIDKAKGGDEENFD
ELRYEGFGPNGSMVIVDTLTNNVNRTASEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVNEMSADDVLELMMEHDLDVRD
VIEEDETVIVYAEPEAFHAVQTAFKAAGVEEFAVAELTMLPQNEVSLDDASQEQFEKLIDVLEDLEDVRQVYHNVEM
>Mature_236_residues
GRKWNNIKEKKASKDANTSRVYAKFGREIYVAARQGEPDPELNQSLKFVVERAKTYNVPRAIIDRAIDKAKGGDEENFDE
LRYEGFGPNGSMVIVDTLTNNVNRTASEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVNEMSADDVLELMMEHDLDVRDV
IEEDETVIVYAEPEAFHAVQTAFKAAGVEEFAVAELTMLPQNEVSLDDASQEQFEKLIDVLEDLEDVRQVYHNVEM

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=29.2181069958848, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=57.8723404255319, Blast_Score=286, Evalue=6e-79,
Organism=Escherichia coli, GI1788171, Length=236, Percent_Identity=38.135593220339, Blast_Score=174, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17556100, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=262, Percent_Identity=29.3893129770992, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y153_EXISA (C4L1E1)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002884532.1
- GeneID:   7870233
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0153
- OMA:   VSHMFDH
- ProtClustDB:   PRK12378
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26409; Mature: 26278

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKWNNIKEKKASKDANTSRVYAKFGREIYVAARQGEPDPELNQSLKFVVERAKTYNVP
CCCCCCCHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
RAIIDRAIDKAKGGDEENFDELRYEGFGPNGSMVIVDTLTNNVNRTASEVRAAFGKNGGN
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
MGVSGSVAYMFDATAVIGVNEMSADDVLELMMEHDLDVRDVIEEDETVIVYAEPEAFHAV
CCCCCCEEEEEECEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHH
QTAFKAAGVEEFAVAELTMLPQNEVSLDDASQEQFEKLIDVLEDLEDVRQVYHNVEM
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRKWNNIKEKKASKDANTSRVYAKFGREIYVAARQGEPDPELNQSLKFVVERAKTYNVP
CCCCCCHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
RAIIDRAIDKAKGGDEENFDELRYEGFGPNGSMVIVDTLTNNVNRTASEVRAAFGKNGGN
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
MGVSGSVAYMFDATAVIGVNEMSADDVLELMMEHDLDVRDVIEEDETVIVYAEPEAFHAV
CCCCCCEEEEEECEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHH
QTAFKAAGVEEFAVAELTMLPQNEVSLDDASQEQFEKLIDVLEDLEDVRQVYHNVEM
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA