Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229915824

Identifier: 229915824

GI number: 229915824

Start: 68994

End: 69917

Strand: Reverse

Name: 229915824

Synonym: EAT1b_0091

Alternate gene names: NA

Gene position: 69917-68994 (Counterclockwise)

Preceding gene: 229915826

Following gene: 229915813

Centisome position: 2.33

GC content: 51.41

Gene sequence:

>924_bases
ATGAAACGAATACTGGAATGTCGGGCAAGTGATTTTATCACGTTTAATCGTCAAGATTTAGTCGATTCGATTCGAAAAGC
AGAAGGTCGAACGGTCATGGCCGAGGTCATCCCGACGGTGCAGCCACTCTATCCAGAAGTGACAAACGCAGAACTCGCAC
GAGCGTTCGGTGCCGACTTGATTTTATTGAACATGTTGGATGTGTTTCACCCGTACATCAAAGGACTCGAAAGTCACGCG
CTGTTCGGCGACATGCCAGGTGATGAGATGAGCGACCATCCGATTCTAGAACTAAAACGTCTGATCGGATTGCCAATTGG
AGTCAACTTGGAACCTGTCGATTTTTTAGAGAAGTCGTCCGAGATGAATGAAGTGAAACGAGGCAGACTCGCTTCAATCG
AAGCGTTCCAAAAAGCATCTGAGCTCGGGATTGACTTCGTCTGTTTGACAGGCAATCCGAATACCGGAGTTACGAATGAA
GCCATCGAACAAGCGATCATCCAAGCGCGTCGTGAATTCGCAGGGGTCATCATTGCCGGGAAAATGCATCAGGCCGGTGC
CGGCAATGTATTGGACCGTGACGCGTATATCCGCTTCGTCGAAGCCGGCGCAGACATTATCCTACTACCAGCTCCAGGCA
CCGTACCTGGTGTCCGTGAAGAATCGTTTTACGAACTCGTTCAGGAGTTGCAATCGCTCGGTGCTCTCACGTTAGCGGCG
ATTGGAACGTCACAAGAAGGTGCAGATGTTGCGACCGTTCGGGAGATTGCGCTCTCTTCAAAACGAGGCGGAGCAGACAT
CGTGCACATCGGTGACGCCGGACTGTCGGGGATTGCCGTCCCAGAGAACATTCAGGCACTTTCAATTGCCATTCGCGGGC
GACGTCATACATACATTCGCATGGCCGCCTCGGTCAATCGGTAA

Upstream 100 bases:

>100_bases
CTCTTTTTCTGTCATGTTCATCCCTCCTCACTTGTAGTATAGAGGATTTTTGAACGGTATAGGGAATAGAGATAAGGATG
AGCAGAAGGAGGCAGATCAT

Downstream 100 bases:

>100_bases
TACAAAAGAGGAAGGAGCGTCTCCTTCCTCTTTCCATTACCATTCTGTGACGTCGCGACGAGGTTTCGTCGGTGTTGTCG
TACCATGACGTTTGGCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKRILECRASDFITFNRQDLVDSIRKAEGRTVMAEVIPTVQPLYPEVTNAELARAFGADLILLNMLDVFHPYIKGLESHA
LFGDMPGDEMSDHPILELKRLIGLPIGVNLEPVDFLEKSSEMNEVKRGRLASIEAFQKASELGIDFVCLTGNPNTGVTNE
AIEQAIIQARREFAGVIIAGKMHQAGAGNVLDRDAYIRFVEAGADIILLPAPGTVPGVREESFYELVQELQSLGALTLAA
IGTSQEGADVATVREIALSSKRGGADIVHIGDAGLSGIAVPENIQALSIAIRGRRHTYIRMAASVNR

Sequences:

>Translated_307_residues
MKRILECRASDFITFNRQDLVDSIRKAEGRTVMAEVIPTVQPLYPEVTNAELARAFGADLILLNMLDVFHPYIKGLESHA
LFGDMPGDEMSDHPILELKRLIGLPIGVNLEPVDFLEKSSEMNEVKRGRLASIEAFQKASELGIDFVCLTGNPNTGVTNE
AIEQAIIQARREFAGVIIAGKMHQAGAGNVLDRDAYIRFVEAGADIILLPAPGTVPGVREESFYELVQELQSLGALTLAA
IGTSQEGADVATVREIALSSKRGGADIVHIGDAGLSGIAVPENIQALSIAIRGRRHTYIRMAASVNR
>Mature_307_residues
MKRILECRASDFITFNRQDLVDSIRKAEGRTVMAEVIPTVQPLYPEVTNAELARAFGADLILLNMLDVFHPYIKGLESHA
LFGDMPGDEMSDHPILELKRLIGLPIGVNLEPVDFLEKSSEMNEVKRGRLASIEAFQKASELGIDFVCLTGNPNTGVTNE
AIEQAIIQARREFAGVIIAGKMHQAGAGNVLDRDAYIRFVEAGADIILLPAPGTVPGVREESFYELVQELQSLGALTLAA
IGTSQEGADVATVREIALSSKRGGADIVHIGDAGLSGIAVPENIQALSIAIRGRRHTYIRMAASVNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33213; Mature: 33213

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILECRASDFITFNRQDLVDSIRKAEGRTVMAEVIPTVQPLYPEVTNAELARAFGADL
CCHHHHHCCCCCEEECHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCHHHHHHHCCHH
ILLNMLDVFHPYIKGLESHALFGDMPGDEMSDHPILELKRLIGLPIGVNLEPVDFLEKSS
HHHHHHHHHHHHHHCCHHCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
EMNEVKRGRLASIEAFQKASELGIDFVCLTGNPNTGVTNEAIEQAIIQARREFAGVIIAG
HHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEC
KMHQAGAGNVLDRDAYIRFVEAGADIILLPAPGTVPGVREESFYELVQELQSLGALTLAA
CCCCCCCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
IGTSQEGADVATVREIALSSKRGGADIVHIGDAGLSGIAVPENIQALSIAIRGRRHTYIR
ECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEE
MAASVNR
EEECCCC
>Mature Secondary Structure
MKRILECRASDFITFNRQDLVDSIRKAEGRTVMAEVIPTVQPLYPEVTNAELARAFGADL
CCHHHHHCCCCCEEECHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCHHHHHHHCCHH
ILLNMLDVFHPYIKGLESHALFGDMPGDEMSDHPILELKRLIGLPIGVNLEPVDFLEKSS
HHHHHHHHHHHHHHCCHHCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
EMNEVKRGRLASIEAFQKASELGIDFVCLTGNPNTGVTNEAIEQAIIQARREFAGVIIAG
HHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEC
KMHQAGAGNVLDRDAYIRFVEAGADIILLPAPGTVPGVREESFYELVQELQSLGALTLAA
CCCCCCCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
IGTSQEGADVATVREIALSSKRGGADIVHIGDAGLSGIAVPENIQALSIAIRGRRHTYIR
ECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEE
MAASVNR
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA