| Definition | Vibrio cholerae MJ-1236 chromosome 1, complete genome. |
|---|---|
| Accession | NC_012668 |
| Length | 3,149,584 |
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Identifier: 229608332
GI number:
Start: 2503502
End: 2505133
Strand: Reverse
Name: Not Available
Synonym: VCD_003250
Alternate gene names: NA
Gene position: NA
Preceding gene: 229608335
Following gene: 229608331
Centisome position: NA
GC content: NA
Gene sequence:
>1632_bases ATGTATAAGAACAAAATCACCCAGGCACTGCTGTTAGGTGCTGGTTTAGCGGTGGCTACCACGTCATTCACCTCTTTTGC AGCGAATGTTCCTGCTGGTACCAAACTTGCTCCTGTTCAAGAGCTGGTTCGTGGTAACGGTACTGAAGTCGCGTCTCTTG ATCCGCACAAAACGGAAGGTGTTCCTGAGTCCAACGTGATTCGTGATCTGTTAGAAGGTCTGGTAAACCAAGACGCTAAC GGTAACGTGGTTCCGGGTGTCGCTGAAAGCTGGGAAACGACAGACAACAAAACCTTTACTTTCCATATTCGTAAAGATGC GAAATGGTCTAACGGTGACCCTGTTACTGCACACGATTTCGTCTACAGCTTCCAACGTGCTGTCGATCCTGCAACCGCTT CTCCTTACTCTTGGTATATGGAATACACCAAGATGAAGAATGCGAAAGAAATCATTGCCGGAGAGAAAGACAAATCAACA CTGGGCGCGAAAGCAGTTGATGATCATACTCTGGTTTTTGAGTTGGAGACTGCCGTTCCTTACTTCGTGATGATGATGGG TCACACAACGGTGAAACCGATTCACAAAGCGACAGTAGAAAAATTTGGTGATCAGTGGACCAAACCTGAAAACTTTGTCG GTAACGGTGCTTACGTTCTCGACAAGTGGGTGGTTAACGAGCGTTTAGAGCTCAAGCGTAACCCTCAATACTGGGACGAC AAAAATACTGTTCTGAATAAAGTGACTTATCTGCCAATCGAAAACCAAGTGGCAGAGATGAACCGTTTCCTATCGGGCGA AATTCAGATCACGAACGAACTGCCACTTGAGCACTTCAAACGTCTGAAAAAAGAGCATCCAGAATCTGTTCAAGTGCAAG GCCAACTCTGTACTTATTACTACGGCTTCAATAACAAAAAGCCACCATTTGACGATGTTCGCGTACGTAAAGCCCTTTCT TACGCGATTGACCGTGATGTGGTTTCTGATGCGATTCTAGGCCAAGGCCAAAAACCGGCTTACTTCCTGACTCCGGAAAT CACCGCTGGATTTAGCCCAGAAATGCCAGCTTACGGCAAAATGACTCAGAAAGAGCGTATTGCAGAAGCGAAGAAATTGC TGGAAGAAGCGGGTTACAACAAATCTAACCCTCTGAAATTCACTCTGCTGTACAACACCTCAGAAAACCACAAGAAGATT GCAACTGCGATCCAATCTATGTGGAAAACTTCTCTGGGCGTTGATATCGCACTGGAAAACCAAGAGTGGAAAACCTACCT AGATACTCGTCGTCAAGGCAACTTTGATGTGACTCGTGCGGGATGGTGTGGTGACTACAACGAAGCGTCTTCTTTCTTGA CTCTGATGTTGTCGAGCAACACTTCAAACGATCCGCAGTACCACAGTGCTGAATACGACGCCGTGATTGAAAAAGCGAAA ACGTCAACTTCTGAAGAAGAGCGTCAAAAACTCTATGCGGATGCAGAGAAGTTGTTGGCTCGTGATATGCCAATCGCGCC AATCTACCAATACGTAAGATCGCGTCTTGTTTCTCCAACCGTCGGTGGCTACCCATCGAATAACGCGGAAGACAAGATCT ACGCCAAAGATCTTTACATCAAAGCTCAATAA
Upstream 100 bases:
>100_bases TGTTTTTGTTTAAAACTTATACGACAAACGACAACAATCAGCCGTTCTGAATACCTGACATGGAAGTCATGGATGCAATA CTAAAACTTGGAGTTTATGC
Downstream 100 bases:
>100_bases TAGAGCCATATTCCTAACGAGTTGAAGTTGCAGTGATGACTGCAACTTCATTCGTCGGGGACAAAACTATAAATAACGTA GACGCTGCATGTGAAATTCA
Product: oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>543_residues MYKNKITQALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDAN GNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKST LGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDD KNTVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPPFDDVRVRKALS YAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKI ATAIQSMWKTSLGVDIALENQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAK TSTSEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYIKAQ
Sequences:
NA
Specific function: NA
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA