Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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The map label for this gene is clpA

Identifier: 229608280

GI number:

Start: 2448502

End: 2450772

Strand: Reverse

Name: clpA

Synonym: VCD_003198

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608281

Following gene: 229608277

Centisome position: NA

GC content: NA

Gene sequence:

>2271_bases
ATGCTTAACAAAGAATTAGAGTCGAGTCTAAACGGCGCGTTCGCTCGGGCACGAGACAAAAGACATGAATTTATGACCGT
CGAGCACCTCCTACTTGCATTGTTGGAAAACGATGCAGCGCGGGAAGCCCTGTTAGCCTGTCAAGCCGACATTGATGTAT
TACGCCGTGAGCTGGATACTTTTATCGACCAGACCACGCCTCTTATCCCCAAAAATGACGAAACTCGCGAGACACAACCG
ACGTTGAGTTTCCAACGCGTACTGCAACGCGCGGTGTTCCACGTGCAATCTTCCGGTCGAAGCGAAGTGACGGGAGCCAA
CGTGCTGGTGGCGATTTTCAGTGAGCAAGAGTCGCACGCGGCCTATCTGCTGAAGAAAAATGACATCAGCCGCTTGGACA
TTGTTAACTTTATTTCGCACGGCATTACCAAAGCGTCTAACCATAGTGAAGACTCTTCTTCCGATTCGTTTGGCAGCAGT
GATACTTCTGAAGAGGTGAGTGCTGACGAGCGTTTGGAAAGTTTTGCGACCAACCTTAATCAGTTAGCAAAACAAGGCCA
GATCGATCCACTGATTGGCCGTGACAAAGAGTTGGAACGTACGATTCAAGTTCTGTGTCGCCGTCGTAAAAACAACCCAC
TGCTGGTGGGAGAAGCGGGTGTCGGCAAAACTGCGATTGCGGAGGGCTTGGCATGGCGAATTGTTGAAGGCAATGTGCCG
GAAGTGATTCAGCGCAGTGTGATTTATTCACTGGATATTGGTTCGCTGTTAGCGGGCACCAAATATCGTGGTGATTTCGA
AAAACGTTTCAAATCGATTTTGAAACAGCTTGAGAAAGAGAAAGACGCCATCCTGTTTATCGATGAAATTCACACCATCA
TCGGTGCGGGTGCCGCTTCTGGCGGTCAAGTCGATGCGGCGAACCTAATTAAGCCTCTGCTCAGTAGCGGTAAACTGCGT
TGTATCGGCTCAACCACCTATCAAGAGTACAGCAACATTTTTGAGAAAGAGCGTGCGCTATCTCGCCGCTTCCAAAAGAT
TGATATTGTTGAGCCTTCATTGGACGATACCACCAAGATTTTGATGGGATTGAAAACCAAATACGAAGCTCACCATGATG
TGCGCTATACCAATAAAGCGCTGCGTGCTGCGGTTGAACTTTCAGCCAAATACATTAATGAGCGTCATCTGCCTGATAAA
GCGATTGATGTGATTGATGAAGCGGGTGCGCGGGCACGTTTGATGCCAGCAAGCCGTCGTAAGAAAACGGTCGGTGTGGC
GGAAATTGAATCCATGGTCGCCAAAATGGCGCGGATCCCAGAAAAATCCGTCTCCTCTTCTGATAAAGACATCCTGAAGA
ATCTGGATCAGAAGATGAAAATGTTGGTGTTTGGACAAGATGCGGCGATTGATGTGCTGACAGAGGCGATCAAGCTGACC
CGTGCTGGATTAGGCGCAGAACATAAGCCAGTCGGTTCTTTCCTGTTTGCAGGTCCAACTGGGGTTGGTAAAACAGAAGT
GACTCTGCAGCTTTCTAAGCTGCTCGGTATCGAACTGCTACGTTTTGATATGTCTGAATACGGTGAGCGCCATTCGGTAA
GCCGTTTGATTGGTGCACCTCCAGGTTATGTGGGTTATGACCAAGGTGGGTTATTGACGGACGCTGTGATTAAGCACCCG
CACTCGGTTGTTTTGTTGGACGAAATTGAAAAAGCGCACCCCGATATTTTTAACTTGCTCCTACAAGTGATGGATAACGG
TACGCTGACGGATAACAACGGCCGTAAAGCCGATTTCCGTAACGTGATTCTTGTGATGACCACCAACGCGGGTGTGGCCG
AAACGGTGAAAAAATCGATTGGTTTGATCCAGCAAGATAATAGTCATGATGCGATGTCGGAAATTAAAAAGGTGTTCACT
CCCGAATTCCGTAACCGTCTTGATCACATTATCTGGTTCAATAGCTTAGATGAGCGTGTGATTCATCAAGTGGTCGATAA
ATTTATCGTGGAACTGCAAGCTCAGTTGGATGCGCGTGGCGTTTCTCTGGAAGTCTCGGAAGATGCCCGCCACTGGTTAG
CAGTGAAAGGTTATGACCGTGAGATGGGCGCTCGTCCGATGGGACGTGTGATCCAAGAACAACTGAAGAAACCACTCGCC
AATGAGCTGTTGTTTGGCTCGTTAGTCGATGGTGGCACAGTGAAAGTGACGCTGAGTGATGACAGACTGGCTTTCGAGTA
TTTCGGTACTCGCGAAGAGGTGGTCCACTAG

Upstream 100 bases:

>100_bases
AAGTAACGATGTACTCAAGGGAAAATGAGCACCCACTTTTGTGCACGATGGAGCAAGCTTAAACTTGCCGGGCAATGTGG
TTGTTCCTTAAGGAGGCCTT

Downstream 100 bases:

>100_bases
ACATCTCACAATACGCAAAAGGCACCGCAAGGTGCCTTTTTTGATCCACAGTATTGGATAACTCCAATTTAACTGAGCAA
GATAAAGATGGTACCCGTTA

Product: ATP-dependent Clp protease ATP-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>756_residues
MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQTTPLIPKNDETRETQP
TLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSS
DTSEEVSADERLESFATNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVP
EVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKLR
CIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDK
AIDVIDEAGARARLMPASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT
RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAPPGYVGYDQGGLLTDAVIKHP
HSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFT
PEFRNRLDHIIWFNSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLA
NELLFGSLVDGGTVKVTLSDDRLAFEYFGTREEVVH

Sequences:
NA

Specific function: NA

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA