Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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Identifier: 229607893

GI number:

Start: 1984692

End: 1985969

Strand: Reverse

Name: Not Available

Synonym: VCD_002809

Alternate gene names: NA

Gene position: NA

Preceding gene: 229607894

Following gene: 229607892

Centisome position: NA

GC content: NA

Gene sequence:

>1278_bases
ATGTTGCCAATAAGACAAATTATGCAGGAAATGGCGGCCGAAAAGCTCAGATTGAGCCTCACTATTTTGGCCGTTGCGTG
GTCAACCTTATGTATCGCAGGGTTACTTGCGGTCGGTGAAGGGATCCGCAGTGGAATTGTACGCACCATCCAAAATGGCA
ATGGTAACCTGATTCATGTCAGCGGCGGTTATGCCACGCAAACCCATGGCCGTTTTCATGAGGGGCAAGCGCTTTCTCTC
ACCGAGCAAGATAGCCAAGTCTTGGCCGCTCTGCCTATGGTCAAACACGCACTTCCTTCGGCCGAGTGGCAAGAGCTGAT
CACGTTTGCAGATAAGCGTTCATGGATGATGCCTTACGCGGTCAAAAGTGAGTATCAGGCGATGAATAAACTGCGCTTGT
TACCCGGCGGGCGCTGGTTTAATCCCGTTGATGAAACACAGCAACGTAAAGTGGTCGTGCTCGGTTATCAACTCGCGGTA
CAACTGTTTAATCAGCAAGAGGGCGACTGGTTTAGCGGCGGCGAATTAGAGCAAGATCCTGTCGGTCAGATTGCCAAAAT
AGGCGCACACGAATTTACGGTGATCGGAGTGCTGGCCAAAAACAGCGGCAACATTGAGCAGGGTTCACCTATTGATTACA
GTGGTTTTACGCCATTCAGTACTTGGCAGCGTTTTCACCCCAACCAAGCGATCAGCGGAATTAACCTTGAACCGAGGGTG
GGCAGTGACCGTCAAGCGTTGGCAGCCACGGTACAGCAAGTGTTAAAACGCAAATACGCCGCCAGCTTGCAAGATCAGCA
AATTGTCATGGTGCAAGACCACTTTTTGAGCCAGAAAAGTATGCAGCAGTTTCTGCTGAGACTACAAAGCTTCCTTGGCA
TTATTGGGTTTATCACTTTAGCCGTGGCAAGTTTAGGCATTACCAATGTGATGTTTGCTACCGTGAAGCGGGCCACACGC
GACATTGGCGTACGCATGGCCGTAGGTGCAACCCCCAATACCATTCGCTGCCACTATTTGGCTCAATCTTTGATCACCAT
GGGCATGGGAGGAATTGCCGGCTTAGGTGTGACATTTGCGATGGTTCGCCTACTCGCCGCCATTCCTTTACAGGGCAATC
CGATTTATGACCACTTAGGCCAACCGGTTCCAGAGCTGTCGCTTAGCGTCATTGTGATAGTGATTGTCACCATTACCGTG
ATGGGCATTGTTGCGGCGTGGTTGCCAGCCAACCATGCGGCGAAAGTGACACCGTTACAAGCATTACAGAGTGAATAA

Upstream 100 bases:

>100_bases
GTTGGTGACCAGCATTTTAGCCTTAGCGGCGGCCTACTTCCCAGCTCGCAGAGCGGCGCAATTAGAGCCCGTCATTGCGC
TCAGTAGTCGGAGTTAATGC

Downstream 100 bases:

>100_bases
TGAAGTCTTTATCTCCTGCTCCTTTGGTGGAGCTACAGCAAATTTGTAAACATTACACCAGTGGGCAAAACGTGGTTAAA
GCGCTTGATGGCGTCGACTT

Product: ABC-type antimicrobial peptide transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>425_residues
MLPIRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHGRFHEGQALSL
TEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAV
QLFNQQEGDWFSGGELEQDPVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRV
GSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGITNVMFATVKRATR
DIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITV
MGIVAAWLPANHAAKVTPLQALQSE

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA