Definition Vibrio cholerae MJ-1236 chromosome 2, complete genome.
Accession NC_012667
Length 1,086,784

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 229605858

GI number:

Start: 912516

End: 915557

Strand: Reverse

Name: Not Available

Synonym: VCD_000806

Alternate gene names: NA

Gene position: NA

Preceding gene: 229605859

Following gene: 229605857

Centisome position: NA

GC content: NA

Gene sequence:

>3042_bases
ATGCGTCCGTTAAAACTTATCCTCCAAGCTTTCGGCCCTTTTGCCGGACGAGAAGAGATTGACTTTACGAAGTTGGGTGA
TGCTCCACTGTTTTTGATCAATGGGGCAACCGGTGCAGGAAAAAGCTCGATTCTGGATGCGATTTGCTACGCCTTGTATG
GCGAAACCACAGGCAGTGAGCGCACCGGCGACCAAATGCGCTGCGATTATGCGGCCCCTGAGTCTCTCACCGAAGTGATT
TTTGAGTTTGAGCTGGCGGGGGCGCGTTACCAAATCACCCGTCAGCCCGATCAAGAGATCCCGAAAAAACGGGGTGAAGG
GATGACGAAGAAATCCCATTCCGCTACTTTGGTTGCACTGAAATCGGATGGAAACGAGCTGATTGCCAACAAGCCCAATC
CTGTCGCGAAGGCGGTGGTCGAATTGATGGGACTTGATGTTAAGCAATTTCGCCAAGTCATGGTGTTGCCTCAAGGCAAG
TTTCGTGAGCTTTTAACCGCCAATTCAAAAGAGCGTGAGCAGATTTTTGGTCAGCTCTTTCAAACCCAGCTCTACAGCCA
AATTGAACGGGCGCTGTTTGAACGAGCAGCGGGTATTCGTAAAGAGAAAGAAGAGTTTGATCAGCAGATCAAAGGTACGT
TGAGTGTCGTCGGACTGGAAAGTGAAGAGCAGTTACAAACCGAGTTGACCGAACTGGCTCCAGTATTAACCCATGCGCAA
TCACAACTCAAAGCTGAGCAACAGCAGTGGGATGAAACAAAAGCGCACTATCAAGCTGCGCTTGAGTTAGAACAACAATT
TATCCGCAAGCAGCAATTGGTGGTAGAAATCGCGACTCACCAAGAGCAGGCTACACACATCGAAATGCTGCGTCAGCAAC
GCCAGCAAGCCCAAAAAGCAGCGCGTTTAACCGCCGTCCATCAACAGTGGCACCAAGCTCAAAAAAACCTACAGCAAGCC
AAACTTAAGGTTGAGCAGCAGCAGACTCTGTTGCAACAGGCGAAAGCTCAGCAGCAACAGGCTCAACAGGCCAGTCAGCA
AGCCAGTTTAGCCTGTGAAGAAGTACCCAAATTAAACGAGCAACGCATAACGTGGCAGCGTGCTGAGCAAAAATTGCTGG
CACAAGAAAATGTTCAGCAAGCGGTGGCCAAGGCTGAGCGTGAACTGCAACTGGCGACACAAAATGCGCTTAATTTGCAG
CAAGCGAGCGAAAAGCTAGAGCAAGAGCTACAAAACCAACGACTCGAATGGGAACAGCAACAGCGCCAATTGACGCGCTT
AGAAGTTCAAAAAGCGCGAATGAATCAGTTGGTGCAGCAAGTTCAGGCTCGCGAGCGAGAACAATCGTTACTGAATGAAT
TACAAACTGCTCAACAAGCTTTATTGCGCTTTGAGCAGCAACATCACCACATCCAAACTCAGGCCGAACAAGCGAAACTG
ACCGCGGATAAACTGGAGTTCGCATGGCATACCCAGAGGGCTGCGGAGCTTGCTCTCGCACTCACACAAAATGAACCTTG
TCCGGTGTGCGGCAGTTTAGAGCATCCCAATAAAGCGCAATATTCGGGTGACGTTGTCACCAAGGTTCAGGTTGAACAAG
CCAGACAGCAGCAACAAGATTGGGTGCAGCGTCAGCAAGAGGCATTCCATGCTTGGCAACAACAAGGGTTTAAAACCGAG
CAGATAGCGCAAAATCTCACGACTTTATCGAGTGAGCTAACTTTGCAGCAAGTGGCTTTATTGAATGAGCTCATTGAACA
GCAACAGATACTTCACAGTGATATTGCTGCGCTACAACAGCTTAACCCTGATTTGCTGAAACGGCAGATTGAAGAGGGGG
AGCAGCGGTTAGCGCACACCAAAATGACGCTCGAAAAACAGAATCAAAACCAGCAACAAGCTTGGCAGACTTTGGCTCAG
TTACAGGCGGAATTGGCGAGTTTGCGCCAAGAAATCCCACCGGAGCTGTCCGATCTTGATACTTTACGAAGCGCGATTGG
GCGTGTGCAGAACCAAATAGAAATCTTACAAAAAGCGGAGCATACGGCTCGTGAACAGTGGGTGCAGGCGCAAAAGCAGT
TTGCCAGTGTGCAGGCGGCTTATCAGGCGGCGATTGAAGCGCACCGTGAGTCTCAGCGTCAGCAGGAGGAAACCACAAGC
GCATGGCAGCAAGGGTTACTCCATTCTGGATTTAGCGATGAGTCCGCCTATCTTGCCGCTCGTTTAACCGATGAGGCTAT
CGTCAATATCGAGCGCCAAATCGCCCAGTATGAAGAGCGCAGTGCGATGCTCAGTGGCGAACAGCAAGCCTTATCACGTA
AATTAGCAGAGAAAAATCGCCCAGAGTTGGAACCACTTCTTGTCAAAGTAACTCAAGCTGAAGAAAAAATGGCACTGGCG
TTGCAGGCGTTTACGCAACATCAATCGCGGATGGATGGTTTGCAACGTGTCGCCAAGCAACTGGCGGATCTGTACCAGAA
AAATCGTGCATTAGAAGCCGAATATCAGGTCGTGGGCACCTTAAGTGATATTGCGAATGGCAAAACGGGCGCTAAAGTCA
GCTTACATCGCTTTGTGCTTGGTGTTTTGCTGGATGATGTCTTGTTACAAGCTTCTCAACGACTGATGAAAATGAGCCGA
GGCCGCTATTTACTCAAACGTAAAGAGGAACGCGCTAAAGGTAATGTGGGCTCAGGGCTGGATTTGATGGTCGAAGATAG
CTACAGCGGTAAATGGCGTGATGTGGCAACCTTGTCCGGTGGTGAATCGTTCATGGCCGCCTTATCGCTTGCGCTTGGTT
TATCCGATGTGGTTCAGGCTTACAGTGGTGGTATCCGTCTTGATACTCTGTTTATTGATGAAGGTTTTGGCAGTTTGGAT
CCGGAATCTTTAGATTTAGCGATCCAAACCCTAATCGATCTTCAGCAAGGTGGTCGAACGATAGGGATCATCTCTCATGT
TACCGAGCTGAAAGAGCAGATCGGTCTAAGATTGGATGTGTTGGCGACAAGAATGGGTAGCACGCTGCGTTTAATCACAT
AA

Upstream 100 bases:

>100_bases
CGTGATTTTTTCCTTGAGGCGAAACGTGAACCTCTGAGTGAGCAGCAAGAGAAAGTGGTGATTGAGGTGATTGCGCGCCT
GAAAGCGGAGGGCATTTAAC

Downstream 100 bases:

>100_bases
GATAAAAGATAGGGGTTTGATGGTTATCACTGACCTCTAGCTAGCGAAACGGTAAAGTATGTGCATGTTGATGATTAGCA
AGAGAATGCAACGGTAGTGA

Product: exonuclease SbcC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1013_residues
MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSERTGDQMRCDYAAPESLTEVI
FEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLVALKSDGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGK
FRELLTANSKEREQIFGQLFQTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTHAQ
SQLKAEQQQWDETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQKAARLTAVHQQWHQAQKNLQQA
KLKVEQQQTLLQQAKAQQQQAQQASQQASLACEEVPKLNEQRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQ
QASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMNQLVQQVQAREREQSLLNELQTAQQALLRFEQQHHHIQTQAEQAKL
TADKLEFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQQQDWVQRQQEAFHAWQQQGFKTE
QIAQNLTTLSSELTLQQVALLNELIEQQQILHSDIAALQQLNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQ
LQAELASLRQEIPPELSDLDTLRSAIGRVQNQIEILQKAEHTAREQWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTS
AWQQGLLHSGFSDESAYLAARLTDEAIVNIERQIAQYEERSAMLSGEQQALSRKLAEKNRPELEPLLVKVTQAEEKMALA
LQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGTLSDIANGKTGAKVSLHRFVLGVLLDDVLLQASQRLMKMSR
GRYLLKRKEERAKGNVGSGLDLMVEDSYSGKWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLD
PESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDVLATRMGSTLRLIT

Sequences:
NA

Specific function: NA

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA