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Identifier: 229605200

GI number:

Start: 159119

End: 160831

Strand: Direct

Name: Not Available

Synonym: VCD_000140

Alternate gene names: NA

Gene position: NA

Preceding gene: 229605181

Following gene: 229605202

Centisome position: NA

GC content: NA

Gene sequence:

>1713_bases
ATGCGTCTTTGCTTTACCCACTCTGTCATTTGTATGTCTGCACTGCCCGATTGCTTCACTCGTTTCACTTCTGTCATCGC
TCATATCGCGCTACCCGAGCGCTTTACTTTTCCATTTTGTTATCAGCCACACCCACTGTCTGAAATTGCGGCCGATGAGC
TACAGCAACATTTGCTCACTCAAACCGATTGGTATCACCCTTTTGGTTTAACGGAAACCGACCCACAAGCTCACGGCAAA
ATGTTTGGAGTACTGGTTGTGCAGCATCGCTCTGGAACCTTGGGTTATTTAGCGGCGTTCTCTGGTCAACTGGCTGAACA
AAATCGGCTGCCGGGATTTGTTCCTCCTGTGTTTGATCGCTTTGCTGATGCGTCTTTTTTCAGAGTGGATGGCGATCAGA
TTGCGGCCATTAACCAACAAGTGCGAGAGCAAGAAACTGATCCGGAGCTTGCGGAACTCGCTAGTGCCCTTAAGCAATCT
CAGTTACAAGCCGAGCATGAGCTGAGCCAGCGGCGTATATTGCACAACAAGCAGCGTCACTTTCGAAAACAGCAGCGCTT
ACAAGCAGAAGAGCTACCAGAAAAAGAAAAACACACTCTGTTGGCTCGCCTAGCGGAAGAAAGTGTGCAACAAAAGCGTC
AGTTACAGTGCCTCAAACAAGAGTGGGAACAGCGTATTGCGGCTTTACAGCATAGGTTAGATCATAAACTCATGCGCATT
GAGCAACTGAAACAGCAACGTAAACAGCGCTCTGCGGCGCTGCAGAAAAAACTGTTCTCCGCCTATCGTTTTACCAATAT
CCGTGGCGTTGAAAAGGATTTGGTTGAGCTATTTTCCGTGACCAAAAATCCGCTTCCACCCGCAGGTTCAGGCGAGTGCG
CGGCTCCAAAACTATTACACTATGCGTTCCAACATCAGCTGCGACCCATTGCATTGGCAGAGTTCTGGTGGGGGCGCTCC
CCCAAATCGGAAATTCGTCAGCATAAGAAGTTCTATCCTGCATGTCAGAGTAAATGCCAACCGATTTTGGCGCACATGTT
AGAAGGGATGCCGCTGGAAGATAATCCACTGCTCAGCAATCCGGCGCAAGGTCAAGACATCACCATTGTGTATCAAGATG
ACGCCATCGTAGTGGTCAATAAGCCTGCTGAATTTCTCTCTGTCCCCGGTGTGCATGTGCATGATTCTGTGTTGACGCGC
TTAAAGGCTCAATTTACCCAAGCAGAAGGGGTATTTGCCCTACATCGTCTCGATATGTCTACTTCTGGACTTTTGGTGTT
TGCGCTGACGCGACGTGCTAACAAACAGTTGCAAAAGCAGTTTATTTCTCGTGCCGTCCAAAAGCGCTATGTCGCACTTA
TCGAAGGAAAATTAAGCGAAACACAAGGTGAGATCCAGTTGCCTTTGTGTGGCGATCTGGATGATAGACCAAGACAAAAA
GTGTGCTGGCAGCAAGGTAAGCCTGCACTCACTCATTGGGAAACCGTGCAAGTGGAGCAAAACCGAACTCGTGTTTACCT
CTACCCACATACAGGACGTACCCATCAATTGCGAGTACATTGCGCCCATCATCTTGGCTTAAATGCGCCGATTGTCGGTG
ACGATTTGTATGGCTTGCAAGACAAACGTTTGTTTTTGCATGCCGAACAACTGAGTTTTGCTCATCCCTACACTAAGCAG
CCCATGACTTTCCAAGTCGATGCGGATTTTTAA

Upstream 100 bases:

>100_bases
GCGAACGTAACCCATATCGCTGCAACTTCAAGTAGGCACGGTATAGGTCAACAATCACCAATAGAAACATAGACTGACAA
GTTTCACCCAAGCAGGTAAG

Downstream 100 bases:

>100_bases
CCGAAAAAGAAAAGGGGCCCAATTTGAGCCCCTAACCATTCTTAAGCCACTTCGGTCGTGGTTGGTTTTAGCAACACGCT
GATATCTGGTTCCTTCTGCA

Product: pseudouridylate synthase LSU rRNA-specific

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>570_residues
MRLCFTHSVICMSALPDCFTRFTSVIAHIALPERFTFPFCYQPHPLSEIAADELQQHLLTQTDWYHPFGLTETDPQAHGK
MFGVLVVQHRSGTLGYLAAFSGQLAEQNRLPGFVPPVFDRFADASFFRVDGDQIAAINQQVREQETDPELAELASALKQS
QLQAEHELSQRRILHNKQRHFRKQQRLQAEELPEKEKHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRI
EQLKQQRKQRSAALQKKLFSAYRFTNIRGVEKDLVELFSVTKNPLPPAGSGECAAPKLLHYAFQHQLRPIALAEFWWGRS
PKSEIRQHKKFYPACQSKCQPILAHMLEGMPLEDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTR
LKAQFTQAEGVFALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQK
VCWQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQDKRLFLHAEQLSFAHPYTKQ
PMTFQVDADF

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA