| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
Click here to switch to the map view.
The map label for this gene is viscA
Identifier: 229591439
GI number:
Start: 4428860
End: 4435156
Strand: Reverse
Name: viscA
Synonym: PFLU4007
Alternate gene names: NA
Gene position: NA
Preceding gene: 229591442
Following gene: 229591438
Centisome position: NA
GC content: NA
Gene sequence:
>6297_bases ATGCTCCAATCCGGCCCATTCGTCGTAATGGGCCTCCCTGCGCGGCCAGTGCCTGACCCCCATGAGAAGGATCTTATGAA GCATTCCTCCCGCCTGCCGGCCAGCTTCCCCCTTACCGCCGCCCAACAGGACATCTGGCTCGACCAACTGCGTGCAGGTG ACTCACCGCTGTACAACATCGGCGGCTATGTGGACTTTGCCGGCGCCGTCGACCCGAACCTGATGCAGCGTGCCATCGAG CGGCTGGTGGCCAAGCACGATGCGTTGCGCACGCAATTGCACAGCGACGCCAACGGCCTGCCTCGGCAGACCTTCGCCGC CACGGTGGCCGTGGACCTGGCGCTGCACGACGTGAGTGCAGCCCCCGACCCGCACGCCGCCTGCCACGCCCTGATGCAGG CGCAAATGGCCTTGCCGTACGCGCTGCAGGGCGCGCCACTGTTCCGCTTCTTGCTGGTCAAGCTGGATGCCGATCACTAC CGCCTCGGCACCCAGGCCCACCATCTGATTCTCGACGGCTGGGGCTTCGGCCAAATGCTGCAATCCCTCGCGCGGCTGTA CACCGCCCTGGCGCAAGGCCAACAGCCGGAGCCGCTGGCGCCGTCCTATATCGACTTTATCGACGCGGACGAGCGCTACC GTGCCTCGGCCCGCTATGCCCGCGACCGCGTCTATTGGCTGGCCAAGTACCCAGTGCTGCCGGAACCGCTGCTGACCCCG CGGCACGCCGCCAAGGCGTCCAGCAACACCCTGGTGCAAGCGTTTCCGGCGGCCCTGCTCAACCGCATGGAGCAGGTGGC CAACCGTTACCAGGCGTCGGCATTTCATGTGCTGCTGGCGGCGATGTATGTGTATTTCACGCGCACCGCCCAGCGCCAGG AGTGGGTGGTGGGGCTGCCGATTCTCAACCGTTCCAATGCGCAGTTCCGTTCGACCGTCGGGCTGTTCACCCAGGTCAGC GCAGTACGGTTGCAGTTCGATGAGCAGTTGCCGTTCAGTGCCGTGGTGCGTGGCGTGCGCGACCAGCTCAAGCAGGATTT CCGCCACCAGCGTTTTCCCCTGAGTGAGATGAACCGTGAGTTGGGCGTGCGCCGCAGCGATCGCGGCCAGTTGTTCGACC TGTCGGTGTCTTACGAGCAGGACGACCATGCGCTGCGCTACGGCACCACCGAGGCGCGTGCGGTCAAAGTCTCCAACCAC CATGAGCCGCTGCCGCTGGCGATCCACTTGCGCAGCAACCGCTACCAGGACACCGCGTGCCTGCATTGCGTGTACAACGA GGCGTACTTCGAGCACGACGAAGTGCTCGCCCTGGCGCAACGCTTTACCTGGCTGCTGGAGCAAGGGCTGGAAGACCCTG CGTTGAAGCTCAGTGATTTCTCGGTGGTGACGCCCGCCGAACAGGCCCGGTTGCACCAGTGGAACGCCACCGCCCAGCCC GGTACGCAGCCGCAGACCCTGCACGCGCGCATCGAAGGCCAGGCCGCGCGCACGCCGGACGCGGTGGCGGCGGTTTACCA GGGCCGGCAGCTGAGCTACGCCCAACTCAACCAACAGGCCAACGCCCTGGCCCATCAACTGCTGGAGCGTGGCGTACAGC CGGACGACCGCGTGGTGATCCTGGCGCGGCGCGGGCTGGACACGCTGGTGGGGTTGCTGGCAATTCTCAAGTCCGGCGCC TGCTACGTGCCGGTCGACCCGGCCCATCCGGCCGAACGCCTGAACTACTTGCTGCAAGACAGCGATCCGGTGGTGGTACT GACCCAGCATGACCTGCTGCACCGTCTGCCTGCGCTGGATGTGCCTGTGCTCCAACTGGACCGCCCGACCTTTCACTTGG GCACCAACCCCCGCGTAGCGGTCAGCCCCTCCCACCTTGCCTACGTGATCTACACCTCAGGCTCCACCGGCTTGCCCAAG GGCGTGATGGTCGAGCACCACACTGTCTCGAACCTGGTGGACTGGCATTGCCGGGCCTTTGACCTGCACGCCGGCAGCCA CACCGCCAGTGTCGCCGGGTTTGGTTTTGATGCGATGGCCTGGGAAGTCTGGCCGGCACTGTGTGTGGGCGCCACGCTGC ACCTGCCGCCCGCCCATGACGGCGCCGAAGACATCGACGCGCTGCTCAGCTGGTGGCGCGCGCAGCCGCTGGACGTGTGC TTCCTGCCGACGCCTGTGGCCGAATACGCCTTCAGCCAGGGCCTGCAACACCCAACGCTGCGCACCCTGCTGATCGGTGG CGACCGTCTGCGCGCTTTCCCCCAGGCGCAGTCCTTTGCCGTGATCAACAACTACGGCCCCACCGAAGCCACGGTGGTCG CCACCTCCGGCCGCATGGACGTGGGCAAGCCGCTGCATATCGGCGCGCCGATCGCGAATGCCACCGCGTACGTGCTCGAC GAACAGCAACGCCCGGTGCCCATCGGCGTAGCAGGGGAGTTGTACGTGGGGGGCAAAGGGGTGGCGCGCGGCTACCTGAA CCGCCCCGATCTCAGCGCCGAACGCTTTCTGGATGACCCTTTCACCCAGGGCCGGATGTACCGCACCGGTGACCTGGCGC GCTGGCTGCCGGACGGCAACCTGGAATACCTGGGGCGCAATGACGACCAGGTGAAAATTCGTGGCGTGCGCGTCGAGCTG GGCGAAATCGAATCCGCGCTGGCCGCCCACCCGCATATCCAAGAGGCCGTGGTGCAGTCGCGCGAGGGGCAATTGCTGGC CTGGTTCGTGCCGCGTGAAGCCGTGCCGATCGAGGCCTTACGCAGCCACCTGCAAGCGTCGCTGCCCGACTACATGCTAC CGGCCGCCTACCAGCCAATGGACGCGTTGCCCCTGACCGCCAACGGCAAACTCGACCGCAAGGCGTTGCCGGCACCCAGC CAGGACGCCTTCGTCACACGCCGGTATGAAGCCCCGCACGCGGGCGTGGAAACCGTCTTGGCGCAGCTGTGGGCCGAGTT GTTGCACGTGCATCAGGTGGGCCGCCACGACCACTTTTTCGAACTCGGCGGGCATTCCTTACTGGCGGTGCAATTGGTGC AACGCATGCGCCAGGTCGGGCTGCGCGCCGATGTGCAGGTGTTGTTCGGCCAGCCGACCCTGGCGGCATTGGCGGCGGCC AGTGAATACAGCGAGGTGGATGAGGCGGACCTGGCCGAACCGGATCAGGCCAGCCTGGCGCTGATCGTCGCCGGCATCCC CGGTGGCGCGGCCAATGTGCAGGCGGTCTATCCGCTGGCGCCGTTGCAGGAAGGGTTGCTGTACCACCACCTCACCGATG AGCACGACCCCTACCAGCAGCAGGCGCTGTTCAGCTTTGCGCGACGCGAGCAATTGGACGCGTTTGCCCAAGCTTTGCAA CAGGTGATCAACCGCCACGACATCCTGCGCACCAGCCTGGCGTGGGAAGCCCTGGAGCAACCGATGCAGGTGGTCTGGCG CCAGGCGCAGTTGCGCGTCGAACCGCTGCGCGAGGGGCATGAACCGCTGGATTTGCGCCAGGCGCCGCTGATGGCCCTGG ACTATGCCGAAGAGCCGCAGCAGCAACGCTGGGTCGCGCGGCTGCGCTTCCATCACTTGGTCAACGATGCCACCTCGACC ACGCTTCTGATGCAGGAAATCCGCGCCCACTTGCTCGGTCAACAGGCGCAACTGCCGGCGTCGGTGCCGTACCGCAATGT GGTGGTGCAAGCCCGTTCACCGGCGCGACAGGCAGGGCATGAAGCGTTTTTCCGTGAGCAGTTGGGGGATGTGGACGAGC CGACCCTGGCGTTCGGTCTACAGGCGCGCCAGGCGGATCGGGCGCAAACCGACGAAGCCGAACGCGCACTGGGCGAGCGT CTGCATCAGCGCGTGCGGGCACAGGCGCGTGGGCTGGGCGTGAGCGCCGCCAGCCTGTTCCATCTGGCTTGGGCCCAGGT GCTCAGCCGTGTCGCGGGCCGCGATGATGGGGTGTTCGGCACCGTGCTGCTCGGCCGTTTGCAGGCCGGTGAGGGCGCCG ACCGCGCCTTGGGCATGTTCATCAACACCTTGCCGCTGCGGGTGCGCCTGGCCGGGCGGACGGTGGCCGATGCCCTCACG GACACCCACACCCAGCTCAGCGCCTTGCTCGCCCATGAACAAGCCTCCCTGGCACTGGCCCAACGCTGCAGCAGCGCGTC GCCGTTGTTCAACAGCCTGCTCAATTACCGGCACACCGACGCCGAGCGTGACCTGACCCTGGTGCCGGGCATCGCCTTGC TCAGCAGCGAAGACGTCCTCAGCTACCCGCTGATGCTGACCGTGGACGATACCGCCAGCGGCTTCCGAATCAAGGCCAAG GCCCCGCGCACCGTTGGCGCCGGGCGCCTTTTGGATTACCTCGAAACCGTACTGGTCAACTTGGTGGACGCGTTGGAGCA GACGCCGCAAAGGCCATTGCGCGAGGTGCAGGTGCTGCCCGCCAGTGAGCTGAAAACCCTGCTGGTGGACTTCAACACGA CGGCCACCGACTACCCCGACACCCTCACCGTGCAGGCGCTGTTCGAAGCCCATGCGCGGCAGATCCCCCACGCCGTGGCG GTGCAGGCCGGCGCGTTGCAACTGACCTACCGCGAACTCAACGAACGCGCCAACCAGTTGGCCTTCCACTTGCGCGAACG TGGCGTTCAACCGGACTCTCGCGTGGCGCTGTGCGTCGAGCGCGGACTGGACCTGGTGGTGGGCCTGCTGGCCATCCTCA AGGCGGGCGGCGCCTATGTGCCGCTGGACCCCGGCTACCCGCGTGAGCGTCTGGTCTACATGCTTCACGACAGCCAACCG GTGGCGCTGCTGGTACACGCCGCGACGCGCGATTTGCCGGGCGAGGTGTCGATCCCGGTGATCGACTTCGACCACTGTGC CTGGCGCCAGGCGCCCATCGGCAACCCGCTGGTGCCGGGTTTGAGCGTCGCCAACCTGGCCTACGTCATGTACACCTCGG GCTCCACCGGCACGCCCAAAGGCGTGATGATCGAGCATCGCGGCCTCGGCAACCTGCTGCACTGGGGCTCGCAACTGTGC CCCAACGCTGAAGGCGGTGCGCTGTTGCAACGGGCGCCGTTCAGCTTCGACGGTTCGGTGTGGGAGCTGTTCTGGCCGCT CGCCAATGGCATGCGCCTGGTACTGGCACGCCCCGATGGGCATCGCGAGCCTGCCTACCTGGCGCAGGTGATTCGTGAGC AACAGATCACGGTGATCAAGTTCGTGCCGGCGATGTTGCAGCAGTTCCTTGAACTGGAAGAATCGGCCCTGTGCACCAGC CTCACCGACGTATTGTGTGGCGGCGGCGAGCTCACCGAAGCCCTGGCCCGTGGCGTGCAGGCGCGACTGCCCAAGGTGCG CCTGCATAACGTCTACGGCCCCACCGAGGCCACGGTCGACAGCAGCGCCTGGACGCTGGAACCGGGCGCACCGGTGCCCG CGCTGCAATTGCCGATCGGCCGGGCGATCAACAATACCCGCCTGTATGTGCTCGACGCGCAGGATTCGCCGGTGCCGATG GGCGTCAGCGGGCAGCTGCATATCGGTGGCGTCGGCGTGGCCCGTGGTTATCTGGGGCTTGAGCAGATGACCGCCGAGCG CTTTATCGACAGCCCGTTTGTGCAAGGGGATCGGCTGTACCGCACCGGCGACCTGGTGCGTTACCTGCCGGATGGCAATC TTGAGTTTCTCGGGCGCAATGACTTCCAGGTCAAACTGCGCGGCGTGCGCCTGGAACTGGGGGAAATCGAGTCACGGCTG GCGGCGCATCCGGCGTTGCGCGAAGTGGCGGTGTTGATTCGGGAAGAGCGGCTGGTGGCGTATTTCACCGTGCGTGCCGA CGCGCCGAGCCTGGAAGCGTTGCGCGCTCATGTGCTGGAGCAATTGCCGGAGTACATGGTGCCGGCGGCGTTTGTGCGGC TTGATGAAATGCCCCTCAACCCTGCGGGCAAACTCGACCGCAAGGCATTGCCGGCGCCGGGGTTGGAGGCGGTGGTGAGC CGAGCGTATGCCGCACCGATCGGGGAAGTGGAAACCGTGATGGCCGGGATCTGGGCGGAGGTCTTGAAGCTGGAGCGGGT AGGGCGGCATGACCATTTCTTTGAACTGGGCGGGCATTCGTTGCTGGCGGTGAACCTGGTGGCGCGAATGCGCAAGGCCG GGTTGGAGGTGGATGCGCGGAGCGTGTTCAGCCAGCCGACGTTGGCGCAACTGGCGGCGTGTACCTTGACGCAGGTAAAG CGTGTGGAGATCCCGCAAACCGCCATTCCTCAACTCAATCGCCGTCGCAGGATCTGA
Upstream 100 bases:
>100_bases TCCTACATCTCTTTAATCGTTTCAGCAATGAACCCTCAGCCAAGCCCGTTCCGTGCGTTTGGATGTCCGGGTTTAGGGTG ACAGACAGCCCCGGGGCCCC
Downstream 100 bases:
>100_bases AGTGGCGTGCGGGCCCTGAAGGCGCTGGCTGAAAGCATTCAACACACTGCGGGCAAAGGCCTTATAACTCGAATGTTTTC GGCTATGCGATTCAGCTATT
Product: putative non-ribosomal peptide synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2098_residues MLQSGPFVVMGLPARPVPDPHEKDLMKHSSRLPASFPLTAAQQDIWLDQLRAGDSPLYNIGGYVDFAGAVDPNLMQRAIE RLVAKHDALRTQLHSDANGLPRQTFAATVAVDLALHDVSAAPDPHAACHALMQAQMALPYALQGAPLFRFLLVKLDADHY RLGTQAHHLILDGWGFGQMLQSLARLYTALAQGQQPEPLAPSYIDFIDADERYRASARYARDRVYWLAKYPVLPEPLLTP RHAAKASSNTLVQAFPAALLNRMEQVANRYQASAFHVLLAAMYVYFTRTAQRQEWVVGLPILNRSNAQFRSTVGLFTQVS AVRLQFDEQLPFSAVVRGVRDQLKQDFRHQRFPLSEMNRELGVRRSDRGQLFDLSVSYEQDDHALRYGTTEARAVKVSNH HEPLPLAIHLRSNRYQDTACLHCVYNEAYFEHDEVLALAQRFTWLLEQGLEDPALKLSDFSVVTPAEQARLHQWNATAQP GTQPQTLHARIEGQAARTPDAVAAVYQGRQLSYAQLNQQANALAHQLLERGVQPDDRVVILARRGLDTLVGLLAILKSGA CYVPVDPAHPAERLNYLLQDSDPVVVLTQHDLLHRLPALDVPVLQLDRPTFHLGTNPRVAVSPSHLAYVIYTSGSTGLPK GVMVEHHTVSNLVDWHCRAFDLHAGSHTASVAGFGFDAMAWEVWPALCVGATLHLPPAHDGAEDIDALLSWWRAQPLDVC FLPTPVAEYAFSQGLQHPTLRTLLIGGDRLRAFPQAQSFAVINNYGPTEATVVATSGRMDVGKPLHIGAPIANATAYVLD EQQRPVPIGVAGELYVGGKGVARGYLNRPDLSAERFLDDPFTQGRMYRTGDLARWLPDGNLEYLGRNDDQVKIRGVRVEL GEIESALAAHPHIQEAVVQSREGQLLAWFVPREAVPIEALRSHLQASLPDYMLPAAYQPMDALPLTANGKLDRKALPAPS QDAFVTRRYEAPHAGVETVLAQLWAELLHVHQVGRHDHFFELGGHSLLAVQLVQRMRQVGLRADVQVLFGQPTLAALAAA SEYSEVDEADLAEPDQASLALIVAGIPGGAANVQAVYPLAPLQEGLLYHHLTDEHDPYQQQALFSFARREQLDAFAQALQ QVINRHDILRTSLAWEALEQPMQVVWRQAQLRVEPLREGHEPLDLRQAPLMALDYAEEPQQQRWVARLRFHHLVNDATST TLLMQEIRAHLLGQQAQLPASVPYRNVVVQARSPARQAGHEAFFREQLGDVDEPTLAFGLQARQADRAQTDEAERALGER LHQRVRAQARGLGVSAASLFHLAWAQVLSRVAGRDDGVFGTVLLGRLQAGEGADRALGMFINTLPLRVRLAGRTVADALT DTHTQLSALLAHEQASLALAQRCSSASPLFNSLLNYRHTDAERDLTLVPGIALLSSEDVLSYPLMLTVDDTASGFRIKAK APRTVGAGRLLDYLETVLVNLVDALEQTPQRPLREVQVLPASELKTLLVDFNTTATDYPDTLTVQALFEAHARQIPHAVA VQAGALQLTYRELNERANQLAFHLRERGVQPDSRVALCVERGLDLVVGLLAILKAGGAYVPLDPGYPRERLVYMLHDSQP VALLVHAATRDLPGEVSIPVIDFDHCAWRQAPIGNPLVPGLSVANLAYVMYTSGSTGTPKGVMIEHRGLGNLLHWGSQLC PNAEGGALLQRAPFSFDGSVWELFWPLANGMRLVLARPDGHREPAYLAQVIREQQITVIKFVPAMLQQFLELEESALCTS LTDVLCGGGELTEALARGVQARLPKVRLHNVYGPTEATVDSSAWTLEPGAPVPALQLPIGRAINNTRLYVLDAQDSPVPM GVSGQLHIGGVGVARGYLGLEQMTAERFIDSPFVQGDRLYRTGDLVRYLPDGNLEFLGRNDFQVKLRGVRLELGEIESRL AAHPALREVAVLIREERLVAYFTVRADAPSLEALRAHVLEQLPEYMVPAAFVRLDEMPLNPAGKLDRKALPAPGLEAVVS RAYAAPIGEVETVMAGIWAEVLKLERVGRHDHFFELGGHSLLAVNLVARMRKAGLEVDARSVFSQPTLAQLAACTLTQVK RVEIPQTAIPQLNRRRRI
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA