| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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Identifier: 229590407
GI number:
Start: 3218015
End: 3220447
Strand: Reverse
Name: Not Available
Synonym: PFLU2948
Alternate gene names: NA
Gene position: NA
Preceding gene: 229590408
Following gene: 229590406
Centisome position: NA
GC content: NA
Gene sequence:
>2433_bases ATGCCACACATCGCCTCTCCCGCCACGCTCAACAACTTTCACTTGTCGCTGCTGACCAGCTCCCTGCTCCTGGCGGTCGC GCCCACTTTCGCCGAGGCCGCTACCGAGGACGCCAAGCTCGGCACTGTGACGGTGATCTCCACCGGCCTGCGTGGCCAGG AACGCACCGTGGCTGACAGCCCGGCGCCGATCGATGTGATCAACAGCGACCAGTTGCTCAAGACCGGCCGCGCCGAGTTG TCCGAGGCGATTGCCAAGCTGTTGCCGTCCTTCAACTTCGGCACCAACATCGCCGGCTACAACTCGGTGACCCGCCCGCT GAGCAACCGCAGCCTCGGGCCTGCCTACACGTTGGTGCTGGTCAACGGCAAGCGCCGGCACAACGGTGCCACCGGCCAAC GCGGTTCCATCGACAACAGCGGCGCGAACGCGGTGGACATCGACCTGATCCCGGTCAGCGCGGTGGACCATATCGAGGTA CTCAAAGACAGCGCGGCCGCGCAATACGGTTCGGACGCGGTGGCCGGGGTGATCAATATCATCCTCAAGTCCACCCATGA CGGCGGGCACCTGGAAACCAGTTATGGGCAGCTGTATACCGGCCAGGGCGAAACCATCAAGGTCGCGGGCGACCAGGGTT TCAAGTGGGGTGATGGCGGCTTCTTCCACCTTTCGGCCGATGCGCGCAAACGCGGCAGCGCCTCCTGGAACGACAAGGCC GACAACAGCGTGCGGGCCTTCAATGACCCGGCCAAGGAAGCAGCCTGGGACCGGGTGGCGATCAAGAACGGCGACCCCGA CCTGAAGGCCTTCAACCTGGCCTACAACGCCGAACTGCCCCTGGAAGACCTCACGCTGTACTCGTTCTCTACCTACGGTG AACGTGACGCCGAAGCCGCCAACTATTTCCGCCTGCCCACCGGCACGGCGGCGGTGCCTGAGGTGTTCCCCGACGGTTAC TTCCCGCTGAACAACATCAAGGACCGTGACTACCAGTTCCTGTTCGGCGGCAAGGGCCTGGTGGCCGACTGGAACTGGGA CCTGAGCACCACCTACGGGCGCAACAACGTGCACCATTCCAGCGACCTGAACATCAACCCGTCGCTGGGCACCGCATCAC CGACCCAGTTCGACAACCTGGCAACCTTCCGCTTCGAGCAGTGGGTCAACAACCTGGACTTCACCCGCCGCTATGACAGC CTGTTCAAGCTGACGCCGCCGGTGCAGGTGTCGGCGGGCCTGGAGCATCGCTGGGAGCATTTCAGTACGTTCGCCGGCGA CCCCGAGGCTTATCTCACCGGCACCTACCCCGCCGCTTCCGGCGCGCAGGCCGCCGTGACGATTCGCCCGGAAGATGAAG TGAGCCTGATCCGCAACAACTACGCGGGTTACCTGGACCTCGGTTTCGACCTGACCGAGCGTTGGTTTCTCGACGTGGCC GGTCGCGTCGAGCATTACGACGATGACTCCGGCAATACCTTCGGCCTGAAAGTGAATTCGCGCTACGAACTGACCGACAC CGTGGCCGTGCGCGGCACCGTGGGCACTGGTTTCCGTGCACCCTCCCTGACGCAGATCGGCTACACCGTGGCCGACAACC GGGTGGCGGTGGATGTGAACGGCAATGTGGTGCCCGCCGTGACCCGCCTGACGCCGTCGGGCAGCAACCTGGCCAAGGCC CTCGGTGGCGATGACCTCAAGCCGGAGAAGTCGCGCAACTTAGGGCTGGGCCTGACCTGGCAACCGGCACCACGCACCAG CATCACCGCCGATGCCTACCTGATCGACATCGACGACCGCATCGCCCTGACCAGCAATATCTACGACCGCGGCAATGGCG CGATCAACGCCATCCTCGCCGCGCAAGGCGTGCCCACCGGCACCTGGGTCAACTATTACACCAACGCCTTTGACACGCGC ACCAAGGGCCTGGATGTGGTGGCTGACCACACCACCCCGCTGGACGCCTGGGGCGAGGTGCGCTGGAGCCTGGGCTTCAA CTGGAACAAGACCACCATTGAAGGCACCCGCGACACGCCGAGTGCGCTGGCCGGTTCCGGCGTGACCCTGGTGGGCCGCG ACCGCGAAGGCGACCTCACCGACGCTTCACCCAAGACCAAGTGGATCCTGGGCGCCAACTGGAAGGTCGAGGACGTGGCC GTCAACCTGCAAACCGCACGCTATGGCGCGGTCAAGACCCTGGCCGTCAACCCCACCGGCGACCGCAGCTTCGGCGCCAA ATGGATCACCGACCTGGACATCAGCTACACCTTCGTCGACAGCGTCACCGTCAGCATCGGCGGTACCAACATCTTCGACG TACGTCCCGACAAAAACGCCGTGTACAGCAACCTCGGCCTGGCGGCCTACGGCAACCCGCCGTTCTACCCAGGCGGCGGC TATTGGTACACCAAGCTGGCCTACGACTTCTGA
Upstream 100 bases:
>100_bases TTTATAGGATTATCTTCGCTTCACAGACCGACCCCATACCTGGTGGAGGACGTACCTCCGACCATCAGGAGCCTACCAGG CTTAAGGGATCCTTCTCGCT
Downstream 100 bases:
>100_bases TTCACACCGTGCATGCACCCGAAACGCCACATGAGGGCACCCCATTGAATACCTCCAACTTGATGAGCCGTCTGCTGGCC CCCTGCGCCTTGGCGCTAAG
Product: putative TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>810_residues MPHIASPATLNNFHLSLLTSSLLLAVAPTFAEAATEDAKLGTVTVISTGLRGQERTVADSPAPIDVINSDQLLKTGRAEL SEAIAKLLPSFNFGTNIAGYNSVTRPLSNRSLGPAYTLVLVNGKRRHNGATGQRGSIDNSGANAVDIDLIPVSAVDHIEV LKDSAAAQYGSDAVAGVINIILKSTHDGGHLETSYGQLYTGQGETIKVAGDQGFKWGDGGFFHLSADARKRGSASWNDKA DNSVRAFNDPAKEAAWDRVAIKNGDPDLKAFNLAYNAELPLEDLTLYSFSTYGERDAEAANYFRLPTGTAAVPEVFPDGY FPLNNIKDRDYQFLFGGKGLVADWNWDLSTTYGRNNVHHSSDLNINPSLGTASPTQFDNLATFRFEQWVNNLDFTRRYDS LFKLTPPVQVSAGLEHRWEHFSTFAGDPEAYLTGTYPAASGAQAAVTIRPEDEVSLIRNNYAGYLDLGFDLTERWFLDVA GRVEHYDDDSGNTFGLKVNSRYELTDTVAVRGTVGTGFRAPSLTQIGYTVADNRVAVDVNGNVVPAVTRLTPSGSNLAKA LGGDDLKPEKSRNLGLGLTWQPAPRTSITADAYLIDIDDRIALTSNIYDRGNGAINAILAAQGVPTGTWVNYYTNAFDTR TKGLDVVADHTTPLDAWGEVRWSLGFNWNKTTIEGTRDTPSALAGSGVTLVGRDREGDLTDASPKTKWILGANWKVEDVA VNLQTARYGAVKTLAVNPTGDRSFGAKWITDLDISYTFVDSVTVSIGGTNIFDVRPDKNAVYSNLGLAAYGNPPFYPGGG YWYTKLAYDF
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA