| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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The map label for this gene is pnl
Identifier: 229589782
GI number:
Start: 2493022
End: 2493960
Strand: Direct
Name: pnl
Synonym: PFLU2293
Alternate gene names: NA
Gene position: NA
Preceding gene: 229589781
Following gene: 229589783
Centisome position: NA
GC content: NA
Gene sequence:
>939_bases ATGTCCTATCCAGAAAGCAAACTCACCGGTTTGATCGGTTTCGCCCAAGCGGCAAAAGTGACAGGTGGCTGGTCCGGCCC TGTGGTCAGTATCACCACACTCGATCAACTCAAGGCCAATATCGGCGACACCACCCCACGGGTACTGGTGATCAACAGTA ATATCTCGGCGTCGAGCCTGACCAAAGTCAACATGGGCGCCAACAAGACCCTGATTGGCTCGTTCCAGAACCGCACCCTG GAGAATATTCACCTGCGTGCAACGGCGCAGTCGCAGAACATTATTCTGCAGAATCTTATCTTCAAGCATTCGGCAAGTAT CAAGGCCAATGACGATATCCAGGTCTACTTGAACTACGGCAGCAAGTATTGGATTGACCATTGCTCTTTCGTCGGGCACA GCTGGTCCACCACTGACGGCAGTGAAGATAAACTGCTGTATATCGGTGAAAAGGCCGATTATGCCACCATCAGCAACTGC TTCTTTGGCAGCCACAAGTATGGCCTGATCTTCGGCCACCCGGCGGATGATAATAAAGCGGAGTTCAATGGTTACCCGCG CCTGACGCTGTGCCATAACCGCTTCGACAACATGGAAGTGCGTGCGCCTGGTTTGATGCGTTACGGTTATTTTCATGTGT ACAACAACTACATCAATAACTTCCACCTCGGTTTTACCCTGGCACAAAACGCCAATATCCTTTCTGAAAGTAACTATTTT GGCGAAGGCAGCCAAAATAAAGGCATGTTGGACGACAAAGGCACTGGCACGTTCACCGATACCAACAGTGTCCCGCCGAT CACCAACCAGAAGTCGCCTAAAGCGCAATGGACGGCCCTTTCCAACTATGGCTATACCTTGAAGACCGCCGCACAAGCCA AGGACTTTACCCAGAAGAATGCCGGCGCCCAGTCGGTAGCCCTGATCTTTGGTAGTTGA
Upstream 100 bases:
>100_bases CGGCAACCTCAGTCCTGCCAAACACTGTGTGCAAGTTAACGGATTAACTTGATGCACAGGCTCGTCTTACCGAGCCATTT TATTGATAGAGAGGGAACTC
Downstream 100 bases:
>100_bases TTAGCTAGCTTTCTACTTAACGATCATTTAATACGGGTGCCACTGTATTTATATCAAGGATATAAATACAGTGATGGCCT TTGTAATCTAAATAATTCTT
Product: pectin lyase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>312_residues MSYPESKLTGLIGFAQAAKVTGGWSGPVVSITTLDQLKANIGDTTPRVLVINSNISASSLTKVNMGANKTLIGSFQNRTL ENIHLRATAQSQNIILQNLIFKHSASIKANDDIQVYLNYGSKYWIDHCSFVGHSWSTTDGSEDKLLYIGEKADYATISNC FFGSHKYGLIFGHPADDNKAEFNGYPRLTLCHNRFDNMEVRAPGLMRYGYFHVYNNYINNFHLGFTLAQNANILSESNYF GEGSQNKGMLDDKGTGTFTDTNSVPPITNQKSPKAQWTALSNYGYTLKTAAQAKDFTQKNAGAQSVALIFGS
Sequences:
NA
Specific function: NA
COG id: COG3866
COG function: function code G; Pectate lyase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA