| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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Identifier: 229588645
GI number:
Start: 1227772
End: 1234284
Strand: Reverse
Name: Not Available
Synonym: PFLU1104
Alternate gene names: NA
Gene position: NA
Preceding gene: 229588646
Following gene: 229588643
Centisome position: NA
GC content: NA
Gene sequence:
>6513_bases ATGCCCACCCACCAACTGCTCAACGGCTTATCCGGCAACCTGCAATCCAGCACAGCCTGGGCCCGGCAACAATCCCTCGA ACTGATTCAGCACACTGTCGCGCAGGCCATGCAAGGCCTGACGCCGCCAGAGCAAACTCGTTACCTCAAACTGCAACGCG AAGCCCTGGCTGCCGTCAACGCCGTCGAAGCCGAAAAAAACCGCCTGATCCAGGCCTTCAAAGTCGAGGGCTTGGCTGAG CTGCGCGAGAAGATCGGCGGGCGTGATCCGGAAAACTACCGCCTCTACACCACCTACCTGGAAAAACGCGAACAACCCTT TCCCTGGGAGCCCCGCGTCACTGAACCGCCGTATCGCCCTCGCCGCGCCCTGGATGAATGGCAGTACATCGAGCACACCA AAAGCATGACCCTGTGGGAAGCCGCCTGCCTGAACTTCGGGTTCACCAGCTCGATCATTCAGGCCTCGGGTTATAGCCTG GCAGAAGCCAGTGAGATCATCGGCGGCAACGACGACCGGAGCCTGCCGGTCAAAGACTTCATCGCCGTAGCCCGCAAGCT GAACCTGGGGGGGCGATTGCGGGCGCTCATCAACCCGACGTTAAGCAGCGACGGCACGCTGCGAAACCTGATCAAGGCCT CCTCCAAGGCGCTGCTGCTGTTCGACTTGCTCGACGCCTGGCGCAACCGCGCCGTCACCGGCTTGACCCGCCCGATGTAT GACACGCTGCACGCCGCCCTCAACGGCGATGGCCCGCAACCGGCTTTCGACATGCTGAGCCTGACGTCCAGTCGCACGCC CATCCTCCCCAAGCCGCACACCGCCTGGCACACCGCAATGCCCATCCCATTACTGCTGATCAATGTGGCCAGCCTCGGGG TGTTGTCGTATTTCCCTTTTCGCCCAGGCGGCGCGCTGCGCTATCACGTTGACGCGCAGGCGGCCGAAAACGCCTGGCGC GAGCAACTCAACACCAGCCACCAGCAACAGGACCTGGGTTGGTTTTCGCGACAACTGCCGCTGATTGGCCTGGCGACCTT TAAATCGCTGCTGCGCCAAGAGCCGCGTCCCAAGGACATGAATTGGCTGACTGGATTGCTGTATGACGGTTTTCACAAAG CCTTCCCGCAGCGGACCCTCGACAGCGTGCGCTTCTCGACAGCCATGCGCCCGGATCGCCCGTTGACGCTGGTCGAAGCG TTCACTCACCAGCAGATTCAACGCTTCCAGGCCGACCTGGACACCCTGGCGACCCCGCGTTCCGAAGCCGACTGGCAGGC CCTCACGGACGCCGTGGCCGCGATTGCCGGCGAAGTCCTGCAACTGCTGCTGACACCACTGCCCGGCGGCGTGACCGGGC TGAACCGCATGATGCAACTGGCCGTCATGGGCAGCCTGACCTACAGCGTCGGCCAAGGCCTGAGTGAAGCGATCCAGGGT GATGCAAGTGGTTTCGCCAGCGCCATGGCGGATGTCGCCGACCTGGCCGTCAGCGGCCGACTGATCTCCACTGCCGGCAG GCTGCACCGCCAGCGCATGCTCGGCTACCTGAACCGGCTGGGCAACCCACGCAAAGTCACGCGCCCGGACGGCGTCGAAG CACTCTGGAAACCCGACGCGCAACCGTACGCGGTGGCCAACCAGGCCCTGCTTAACGGCAAAACCGCGGACGCCCTGGGG GTCTTTTCCGTCAAGGGCAAACGCTACGTCAAACTGCGCCACGACGACCAGGCACTGGTGGTGGAAGTGCGGCACGACTC GCAGAGCATGCGTTACGTGCTCAAACACGCAAACGCTGACACCTATAACCCACCGATCATTTTCGAACCCGCCTGGCAGG CCTGGAAGTTCGACCTGCATAACGCCCACACGCTGTCCGACATCAAATTGCTGCAGCGCATGCTGCCCAACGGCTCTTCC CATGCCCCCGTGGCCGACCTGGAGCACATGCTCAAGAGCACCGCCACACCGCGCGCCACCCTGGACCGGGTCTGGGCCGG ACACAGCGCACCGCTGAACCTGATCGAAGGGGTCAGGCGCCTGCAAGCCGACCGGGTTATCCAGCAAATCATCGACCACT TCGACCAGCCGGGGTACATGCCCCCTCACGGCGACAGCACGGTGTTTTGCCTGCTGACGCAATTGGCGGGCTGGCCGGTC GAAGCCCTGTTGAGCATCCGTGAGGAAGCCGGCGAAGTGATTGAAATTTATAGCAAACCTGAACACGCGCCGACCAAGCC TCACCTGATCAGCCTGACGCGTCGTGAGGACGGCAGCTACCTGGCCACCAATGGCCAGCGGGTATCGCCCGGTTCCGCCG ACACGTTGCTGTTACTCATCCTCCAGCTGCAACCCAGTGGTTCGACCCTGGGCCAGGAAACCCGCCACAACCGTTCGCCG GACCAACGGGTCGTCGCCATTCGTGAGCAGGTCGTGGCCCTCGCTCGGCAGGAGCGGATGACGCTGTTCAGCGCCGTGGT CGACTTTTCGGGTTACGAAAAAGGCGAGCGACTTCCTCCTGCCGATGTGCGACGGTTCCTGCCGTTCATGGCATCGCCTC CCTTGGTGGCCGTCACGCCGCTGCTGAAAAAAATGCGCGACCTGAACCGGCCGCTGTCGCCCGCCCACCTTGAGCAACTG CTCACGGCTAACCCACTCACGCCACGCCAGCATCAGGCTTTTCTTGACGCCGGCACCTTGCCGACGGCGTTTGCCGAATG GTTGGATCACCACCGCACGGCGCTGCGTATCGACGCCGCAATAGACGGGCTGTACCACCCACGCGCGCACAATGACGACA TTGACCAATGGGCCCGGGAGTTTGCCTCGGCCTTGGTGCGCAACACGCTTAAACGGCCTTTCGTGATCACCGAAGTGGTC GCCGGTGACATCGCCACCCCTTACCTGTCCAGCAGCTCGGACGACCCGACCGTGGAACTGCGCCATTACGGCCGTGGGCG CTATGAAGCGTACGACCTGCGTAACGGCGGAACGATTCCGGTATCTCCCGACAACGAGAGTTTCTACCTGGCCATCGGTT CGGTGCTGCAACCCCATGAGCGCCAGCTACTGGGTATGAACAGCGCCAGCGATAGCCAAGGCCTGCGTACCACGTTGGGG GATTACATGAGCAACCAGCGCAATACCGAAGGGTTTGTCAGCCTGGTCAATGGCTCGTTGGTGCAATACGAACAACGCCT GGACCTGCCACCGGACCTGGCGCCCACCGCCAACGGCATTTTCGTACTCGACGGGCGCCACTACCTGCCGTTGCTGGATG CGCTCTACCGGATTGCCTTCGACAAAAAGCGCCTCAAATGGCGGCTGCACCACCCGACGAAAATCGGCGTCGATACCCCC ACCCTTGAACACAACGGCGAAGGCACCTGGCGCCTGTCGAGCGAAAACCCGATGACCTGGGACGACCATCGCCTGCTCTA TCGGCTGGGTAACCACGCGTACGCCTTCACACGGGAAATGGCCGCTAAAATCCTGGCCCTGACCGACACCTCCGCGCCGC TGTTGCGCCAAGTCCACCGCAATGGTCGCGCCGTACCGCCGCTGCTGGCAGACACCTGCAAACGCTTGAAGATCGAACAG GAAATCCACCGGTTCATCGAGGCCATGCGCGCCGAGCCCACCTCACGCAGCGCCCAGCCGCACTTGCAGATGTTGGTGAT ATCGAGCCTGCCGGACTGGCCATCGAGCCACGTGCTGCAGATCGTCGATCGACAGAACCGGGTGCTGCAACAATACCCGG TCAGCCAGGCACCCGATGCCCAGGCCGTGAAGGTCACCGAGCACGATTACAAAGACGCCAAACTGCTGGAAGTGCTGAGT CAAAACGACGCCATCACCCAAGGCCTGCTCGGTGAATTACCCGCGTCCCACGACGAACGTCTGTTCAAGCTGGTTAAGAA AATCGTCGAATTTGCCCAACGCGAAAAAGCCGACATCTTCAATTCGCTCTACGCCCAGAGCGAGACCACCGGCAACCTGC GCGATAAACGCTTCAAAGCCAAGTTCCCGGAACTACCCACCCCGCTGGTCAAGGCCATACTCGAACACGCCAGCCCGCGT GAACTCAGGCAACTTCGCGACAAGCATCAAGTGAGCCTGCGGCTTGCCGAACAGGTGCGCCTGTCCAGCCATGACCTGCG CTTGAACCGGGCTTATGAAGGGCTCTACCTGAGCGCCTGGACCCACCCCGACAGCGACAAAATCACCCTGCACCTGCTCA AATCCCTGCCCACCTGGCCTAAGGGGCTGCGTATCGATATCCACGAAGGTGACTCGCGCGGGCGCCTGCTGGAAAGCGCC GGGCACTTGGACGGTTCGGTGCGCCGGGTACTCGCTCGCACCCAACGCGGCTATCAAGGCTACGCGGCGGACGGCGCACA CCTGGGTGCCCCATCGCCCGCGCTGCTGGACGTCATCGTCAAGACACTGTCCGACAGCGAAAAAGCCGCGCTGGGGGTCG TGGGCGAACCGGGTATTGCTGACTTACGCGAACAAATCGCCGCCCTTGCCCTGGAACGTCGGGTCGAAATCAAACGTCTG CTGGACCTGCCTCACGTGCAACCCTGGATGGTGCCGCCGCTGGGCGTGAATCGAACGTTCCTGGCCTACCCGCTGTGGAG TGAGCTGTGGCCCTTCGGCGGTAATCGCCCGCCCGACCTGATGTCCAGGGTCCAGCAGGTCTACCCGCGTTTTTCCAACG ACGACGCTCGGCGCTTCATTCGTTCACTGAACCTCAGCGAACCCGCCGCGCTGATTGAACTGGATCGGCGCCAGGCCGAA ATCCAAGCATTGCCGACGGAGCTGCAACGCTGGTCCGATGCGACCTACAGCCAAGATGACAGCCTGGAAAGCGACAGTGA TCGCGACAGTGACCGGCAATCCTGGAGCAACCTCACAACACGACGCGCACTCGCCCTACGCCTGTGCGAAGCCGCCCGAC GGGAAAACCCTCAGCGCTTTATTTTCGGGTTATTTCACCTGTCCTCGTTGACCCTGCAACTGGACGCCATCAATACATTG CCGACCCTGAGCATCGACTCGCGCACGTTCGAGCACATCGAATACCTGCACCTCGCAGGCGATATTTTCCCCGTCCAAGG GGATGCCTTCCTGCGCTATTTCAGCCAGCTGCGCGCGTTGAAAATCGACTGTGACCTGAACGAATTGCCCAGCGCAATCA GCGATATGGCCCACCTCACCCACCTGGACCTGGCAGACAACCGTATCGTGCTGACAGCCACCTCCGCCGAACGCCTGAGC AGGCTGGTCAATCTGCGCGAGCTGAACGTGAGCGATAACCCACTGGGGGTGGTTCCGGACTTCGCCGCGCTAACCGCGTT GCAAACCCTGAACCTGCGCAATACCGGCTTAACTCAATGGCCACACAGCGCGTGGGCATTGCCCAACCTCAGCCTGTTGC ACCTGGAGGAGAACCACATCACCACCCTTCCCGAGAGCCTCTTCAGCAGCCCACAGGCCCTGGAACGTCAACGGCGTACG CTGTTGCATGACAACCCACTGACCCTCGAGACACGCCAGCGGCTCGCCCGGTACAGTGCCGAAACCCGGGTCAACCTGCG CGGCGCAAGGCCCGGAATCGTGCACCTGCCGGGTCCGTCCAAGGACTTCAATAACTGGTTGTCGGGCGTACACGCCAATA AACATGAGAGCCTGCGATTTCTCTGGGACGCCTTGCGCGAGCACGAAGGGGCAAGCCCCGACGACACCTTCAGGGTGCTG AGGGACTTGACCCAGTCATACGATTATCGACAGGGCGGGCGGATCAGGGCCGGCCTGACTCAGCGGGTGTGGACGCTGTT GATTGCCATGGGCAACTCGAACCACCTGTGCGAGACAATCTTCCTCAACACTTACGCCGCAGGCACCTGCGGTGACGGCG CGATTTTGACGTTCAGCAACATGGAGCTCATGCACCGGGCGCACCAGGCCAAGTCTCAACAGGGAAGCCATCAAGTGGAC AAGGACTTGCTGGTGCTGGCGCAAGGCAGTTACCTGATCGAACAGCTCGACCAGTTTTCCGAGGACCTCATCGCTCGCCT GGAAACGCCGGAAGAACCGCTGGATGCGGCCGAAGTCACGCTGTTTTTCAGGGTCAGGCTCACCGAAGAATTCAGCCTGC CGGTGCACCCCGAACAGATGCTGTATGCCATTGACGAGCGCGTGACCGAACAGCACGTGCAGGAAGCCCGCGACCACCTG AATGCCTTGCGCAGCACACCGGCGCTACAGGACTCGATACTGGAGCGCGAATTCTGGATCGAATACCTGGCACTCAGCTA CCCGGAGCCGTTCCTGACGGTGCGGGATGCATCCAAGCTCAAGCAGCAGGAACTGGATCAGCAGGTGCAGAACAAGCGCT CCGACGAATACCTGGAACGACGCCAGTCACTGATAGAGCGAGAAAAACTGGAGCAATACCGCCTGGTCCGGCAATTGACC GAAGCGGCGCAGTTGGCCCAAAGGGTCCACTGA
Upstream 100 bases:
>100_bases CACGCCCATGAAGTCCGCAACCCAGGTACATAGTTAACCCCAGGCGCCAAAGGCGCCATGGTCCCCTTGGCCTTCCACCC ATTGTGAAAGGCCCCAACAC
Downstream 100 bases:
>100_bases CCGCTCCGGCGATAGGGCCTATCGGGCGGGCACGGTGGCTTGCGTCGGCTGCAACTTGAACACGTAGAACAGCACCGTCA GCATTACCAGGAACGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2170_residues MPTHQLLNGLSGNLQSSTAWARQQSLELIQHTVAQAMQGLTPPEQTRYLKLQREALAAVNAVEAEKNRLIQAFKVEGLAE LREKIGGRDPENYRLYTTYLEKREQPFPWEPRVTEPPYRPRRALDEWQYIEHTKSMTLWEAACLNFGFTSSIIQASGYSL AEASEIIGGNDDRSLPVKDFIAVARKLNLGGRLRALINPTLSSDGTLRNLIKASSKALLLFDLLDAWRNRAVTGLTRPMY DTLHAALNGDGPQPAFDMLSLTSSRTPILPKPHTAWHTAMPIPLLLINVASLGVLSYFPFRPGGALRYHVDAQAAENAWR EQLNTSHQQQDLGWFSRQLPLIGLATFKSLLRQEPRPKDMNWLTGLLYDGFHKAFPQRTLDSVRFSTAMRPDRPLTLVEA FTHQQIQRFQADLDTLATPRSEADWQALTDAVAAIAGEVLQLLLTPLPGGVTGLNRMMQLAVMGSLTYSVGQGLSEAIQG DASGFASAMADVADLAVSGRLISTAGRLHRQRMLGYLNRLGNPRKVTRPDGVEALWKPDAQPYAVANQALLNGKTADALG VFSVKGKRYVKLRHDDQALVVEVRHDSQSMRYVLKHANADTYNPPIIFEPAWQAWKFDLHNAHTLSDIKLLQRMLPNGSS HAPVADLEHMLKSTATPRATLDRVWAGHSAPLNLIEGVRRLQADRVIQQIIDHFDQPGYMPPHGDSTVFCLLTQLAGWPV EALLSIREEAGEVIEIYSKPEHAPTKPHLISLTRREDGSYLATNGQRVSPGSADTLLLLILQLQPSGSTLGQETRHNRSP DQRVVAIREQVVALARQERMTLFSAVVDFSGYEKGERLPPADVRRFLPFMASPPLVAVTPLLKKMRDLNRPLSPAHLEQL LTANPLTPRQHQAFLDAGTLPTAFAEWLDHHRTALRIDAAIDGLYHPRAHNDDIDQWAREFASALVRNTLKRPFVITEVV AGDIATPYLSSSSDDPTVELRHYGRGRYEAYDLRNGGTIPVSPDNESFYLAIGSVLQPHERQLLGMNSASDSQGLRTTLG DYMSNQRNTEGFVSLVNGSLVQYEQRLDLPPDLAPTANGIFVLDGRHYLPLLDALYRIAFDKKRLKWRLHHPTKIGVDTP TLEHNGEGTWRLSSENPMTWDDHRLLYRLGNHAYAFTREMAAKILALTDTSAPLLRQVHRNGRAVPPLLADTCKRLKIEQ EIHRFIEAMRAEPTSRSAQPHLQMLVISSLPDWPSSHVLQIVDRQNRVLQQYPVSQAPDAQAVKVTEHDYKDAKLLEVLS QNDAITQGLLGELPASHDERLFKLVKKIVEFAQREKADIFNSLYAQSETTGNLRDKRFKAKFPELPTPLVKAILEHASPR ELRQLRDKHQVSLRLAEQVRLSSHDLRLNRAYEGLYLSAWTHPDSDKITLHLLKSLPTWPKGLRIDIHEGDSRGRLLESA GHLDGSVRRVLARTQRGYQGYAADGAHLGAPSPALLDVIVKTLSDSEKAALGVVGEPGIADLREQIAALALERRVEIKRL LDLPHVQPWMVPPLGVNRTFLAYPLWSELWPFGGNRPPDLMSRVQQVYPRFSNDDARRFIRSLNLSEPAALIELDRRQAE IQALPTELQRWSDATYSQDDSLESDSDRDSDRQSWSNLTTRRALALRLCEAARRENPQRFIFGLFHLSSLTLQLDAINTL PTLSIDSRTFEHIEYLHLAGDIFPVQGDAFLRYFSQLRALKIDCDLNELPSAISDMAHLTHLDLADNRIVLTATSAERLS RLVNLRELNVSDNPLGVVPDFAALTALQTLNLRNTGLTQWPHSAWALPNLSLLHLEENHITTLPESLFSSPQALERQRRT LLHDNPLTLETRQRLARYSAETRVNLRGARPGIVHLPGPSKDFNNWLSGVHANKHESLRFLWDALREHEGASPDDTFRVL RDLTQSYDYRQGGRIRAGLTQRVWTLLIAMGNSNHLCETIFLNTYAAGTCGDGAILTFSNMELMHRAHQAKSQQGSHQVD KDLLVLAQGSYLIEQLDQFSEDLIARLETPEEPLDAAEVTLFFRVRLTEEFSLPVHPEQMLYAIDERVTEQHVQEARDHL NALRSTPALQDSILEREFWIEYLALSYPEPFLTVRDASKLKQQELDQQVQNKRSDEYLERRQSLIEREKLEQYRLVRQLT EAAQLAQRVH
Sequences:
NA
Specific function: NA
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA