| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
Click here to switch to the map view.
The map label for this gene is maf [C]
Identifier: 229587178
GI number: 229587178
Start: 1177579
End: 1178226
Strand: Direct
Name: maf [C]
Synonym: RAF_ORF1157
Alternate gene names: 229587178
Gene position: 1177579-1178226 (Clockwise)
Preceding gene: 229587177
Following gene: 229587181
Centisome position: 92.1
GC content: 35.19
Gene sequence:
>648_bases ATGAAGCAGAACAGAAAAAACCTACCGATTATATTAGCATCAAGCTCTCCTGCAAGAATTGAGTTACTAAACAGAATCAA AATTATCCCTTCACAAATTATTCCGGCAGATATAGACGAAACACCTAATTTGCGTGAATTACCCGCTCCCTTAGCCATAA GACTTGCTTACGAAAAAGCTATAAAAATTGCATCTCAAATAGAGGCATCAGCTATAATTATAGCTGCCGATACCGTAGCG GCAGTAGGTAGAAGAATATTGCCGAAAGCTACTACTTATGAAGAAGTCAAGAATTGTATTAAGATGTTATCCGGGCGTCG TCATCGTGTCTATACCGGTTTATGTATTATCAAAAAAGAGAATGATCAGCTTACAGTTAGACAAAAAATAGTTCAGACTA TTGTTAAGTTCAAAAAATTAAGTGATGAAGAGATTAATTTTTATTGTTCTTTGGATGAGGGAATAGATAAAGCCGGCGGA TGTAAAATTTCCGGTTATGCAGAAGCTTTTATCTCATTTATTTCCGGCTCATATTCAAATGTTATGGGATTACCTTTATT TGAAACAGTAAATGCTCTAACTTCTTTAGGTTTTAGATGTTCAAGTATCATGCCTGCAAAAATGAATTATTGTCATTCCG CGACTTGA
Upstream 100 bases:
>100_bases ATCGTATCAGAATATTACTAGGAGATAAAGTTATGGTAGAAATGACTCCTTATGATTTAACTAAGGGACGTGTGATTCAT CGTCACTAGTCTTTATAAGT
Downstream 100 bases:
>100_bases TCACGGAATCTAGTTAAAAATACTAAAATTATTAATATAATAATTTGTTTTTCTAGACCCCGTGGTCAAGCCACGGGGTG GCATTAAATGTTTTTGGATT
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKQNRKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKAIKIASQIEASAIIIAADTVA AVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGIDKAGG CKISGYAEAFISFISGSYSNVMGLPLFETVNALTSLGFRCSSIMPAKMNYCHSAT
Sequences:
>Translated_215_residues MKQNRKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKAIKIASQIEASAIIIAADTVA AVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGIDKAGG CKISGYAEAFISFISGSYSNVMGLPLFETVNALTSLGFRCSSIMPAKMNYCHSAT >Mature_215_residues MKQNRKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKAIKIASQIEASAIIIAADTVA AVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGIDKAGG CKISGYAEAFISFISGSYSNVMGLPLFETVNALTSLGFRCSSIMPAKMNYCHSAT
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=202, Percent_Identity=31.1881188118812, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI291045181, Length=153, Percent_Identity=32.0261437908497, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI291045183, Length=197, Percent_Identity=29.4416243654822, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI310133124, Length=128, Percent_Identity=33.59375, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789646, Length=187, Percent_Identity=33.1550802139037, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081830, Length=178, Percent_Identity=33.1460674157303, Blast_Score=79, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193202443, Length=190, Percent_Identity=33.6842105263158, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI78706856, Length=187, Percent_Identity=31.5508021390374, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1157_RICAE (C3PLU6)
Other databases:
- EMBL: CP001612 - RefSeq: YP_002845679.1 - ProteinModelPortal: C3PLU6 - GeneID: 7815431 - GenomeReviews: CP001612_GR - KEGG: raf:RAF_ORF1157 - OMA: VVGLPLC - ProtClustDB: PRK01526 - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 23750; Mature: 23750
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: ACT_SITE 40-40
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNRKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKA CCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHHHHHHHHH IKIASQIEASAIIIAADTVAAVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKE HHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEC NDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGIDKAGGCKISGYAEAFISFISGSYSN CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCC VMGLPLFETVNALTSLGFRCSSIMPAKMNYCHSAT CCCCHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCC >Mature Secondary Structure MKQNRKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEKA CCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHHHHHHHHH IKIASQIEASAIIIAADTVAAVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKE HHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEC NDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGIDKAGGCKISGYAEAFISFISGSYSN CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCC VMGLPLFETVNALTSLGFRCSSIMPAKMNYCHSAT CCCCHHHHHHHHHHHCCCHHCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA