| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is terC [C]
Identifier: 229587148
GI number: 229587148
Start: 1133579
End: 1134484
Strand: Direct
Name: terC [C]
Synonym: RAF_ORF1111
Alternate gene names: 229587148
Gene position: 1133579-1134484 (Clockwise)
Preceding gene: 229587147
Following gene: 229587149
Centisome position: 88.66
GC content: 27.7
Gene sequence:
>906_bases ATGAGTTGGATTATTTTTTATACGGTAATCGCTGCTTTACTGATTCTCGATTTGGGAATAATACACAAAAAAAATACCAT AATGAGCTTTAAAGAAAGCGTACTTTTTAGTCTTTTCTATCTTGTAATAGCTTGTTTATTCGGTATCTATGTTTACTATA ATACGGGGGCAGATCATGCTCGTGAATATTATACTTGCTTTCTCATTGAGAAAGCTATGTCACTTGATAATATTTTTGTT ATCTCTATTATTTTCCAATTTTTTAAAATTCCCCGGCAATATCAACATCGTGTTTTATTTTTCGGTATAATAGGCGTAAT AATATTCAGAGCTGTAATGATTTACGGCGGTATTATTCTTATAAATAAATTTGCCTGGTTATTATATATTTTTGCCGTAA TACTTATTGCTACAGGTATAAAAACTTTCTATGTATCACATAAAACTTTTGATATACAGAATTCTTATATTTACAAGTCA ATAATAAAAAATCTAAATATTACCCCTAACCTTGAAGGGGATAAATTTGTTGTTAAACGTAATAACAAACTATATTGCAC CCCCCTTTTTATATCTCTAGTACTGATAGAAGCAATAGATTTAGTCTTTGCTATAGATAGTATACCGGCAATATTCGCAA TTACTAATGATGTTTATATAATTTATACTTCAAATATTTTTGCTATTTTAGGGCTTAGAGCGTTATTCTTTTGTTTAGCA GAAATTGTAGAACGTTTCAGTTATATAAAATATTCTTTGGCTTTAATTTTAATATTTATCAGCTTTAAAATATTTATTCA TCATTATATAGCGATTCCGGAATATGTTGCGTTCACTGTAACTATTACTTTATTACTATTTGGTATAATTGCTTCCATAA TTAGGAAAAATATGATTGACCATTAA
Upstream 100 bases:
>100_bases TATTTAAAACAAGGAGAAAATACTATAAGATTCCAGCTAAGAGTTATGTTTGAGGGAGGACTATATTTCCACATGCAATA TAAAATGAAGAGATAAATAA
Downstream 100 bases:
>100_bases TGAAGGGGGTATATAATATTTTTTTATTTTTTAAGCAATTATAATGACTAAATTACTAAAATTATTTTTTATTACTATCA TCATTTTTAATAACATTGCT
Product: Tellurium resistance protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSWIIFYTVIAALLILDLGIIHKKNTIMSFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFV ISIIFQFFKIPRQYQHRVLFFGIIGVIIFRAVMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKS IIKNLNITPNLEGDKFVVKRNNKLYCTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA EIVERFSYIKYSLALILIFISFKIFIHHYIAIPEYVAFTVTITLLLFGIIASIIRKNMIDH
Sequences:
>Translated_301_residues MSWIIFYTVIAALLILDLGIIHKKNTIMSFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFV ISIIFQFFKIPRQYQHRVLFFGIIGVIIFRAVMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKS IIKNLNITPNLEGDKFVVKRNNKLYCTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA EIVERFSYIKYSLALILIFISFKIFIHHYIAIPEYVAFTVTITLLLFGIIASIIRKNMIDH >Mature_300_residues SWIIFYTVIAALLILDLGIIHKKNTIMSFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFVI SIIFQFFKIPRQYQHRVLFFGIIGVIIFRAVMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSI IKNLNITPNLEGDKFVVKRNNKLYCTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLAE IVERFSYIKYSLALILIFISFKIFIHHYIAIPEYVAFTVTITLLLFGIIASIIRKNMIDH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=292, Percent_Identity=39.041095890411, Blast_Score=213, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 34846; Mature: 34715
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWIIFYTVIAALLILDLGIIHKKNTIMSFKESVLFSLFYLVIACLFGIYVYYNTGADHA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH REYYTCFLIEKAMSLDNIFVISIIFQFFKIPRQYQHRVLFFGIIGVIIFRAVMIYGGIIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSIIKNLNITPNLEGDKFVVKR HHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEE NNKLYCTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA CCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHH EIVERFSYIKYSLALILIFISFKIFIHHYIAIPEYVAFTVTITLLLFGIIASIIRKNMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC H C >Mature Secondary Structure SWIIFYTVIAALLILDLGIIHKKNTIMSFKESVLFSLFYLVIACLFGIYVYYNTGADHA CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH REYYTCFLIEKAMSLDNIFVISIIFQFFKIPRQYQHRVLFFGIIGVIIFRAVMIYGGIIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSIIKNLNITPNLEGDKFVVKR HHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEE NNKLYCTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA CCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHH EIVERFSYIKYSLALILIFISFKIFIHHYIAIPEYVAFTVTITLLLFGIIASIIRKNMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]