Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229587077

Identifier: 229587077

GI number: 229587077

Start: 1037491

End: 1038045

Strand: Direct

Name: 229587077

Synonym: RAF_ORF1011

Alternate gene names: NA

Gene position: 1037491-1038045 (Clockwise)

Preceding gene: 229587069

Following gene: 229587084

Centisome position: 81.15

GC content: 25.05

Gene sequence:

>555_bases
GTGATAATTAAATATATTCAAAATATGCTTTTTCAATCACTAAATTTATACTCTATCTTAGTTGCAGGTCTTACAGCTAC
TTTTATCGTGTTTATGCGTCAATTATCTTATTACAAACAGCAAATTATTAATAAGGATTTAAAAATAATACCTGCATATT
TTGATAAAAAAATGTTATATAAAATTCTTAATAATAACTGCGATAGATATTCTGCTCTTGAAATGATTAAATCATATTTT
AAGTTGAAAACTGCAAGATCGTTATCATATGAAGAACTTGAAAATGATAAGCAATTAAGCGAATTATTTAGAGATTCTTT
AAACTATTTTATTGATGATTTTATATCAAAATCCGATAAATCAGTTACAGTAAATAAAGTGTTTAGTATACAAGATGAAC
ATAACAATACTCATAAATCATATGCGTTTTTAGAGAAAAATAAAATATCGGACAAAACACATCAAATGCTTATATATGTC
AAAGTGCATTATATAATGACCAAAGACGACGAAGAAAGCTTAAACACTTTCATACACTTGGCTAAGATAATGTAG

Upstream 100 bases:

>100_bases
TATGTGATAAATAAACTAATTGAAAGAAAAAATAAATAATGTACAGTAATAATGGTTCATTTTTAGATTGAACAGCAAAA
ATACTATACTATCATTAGTA

Downstream 100 bases:

>100_bases
ATTTCCCAAAAACAAAATTAGACACTCAAATAACAAATTTAAATTTAAGAGTGAGCTTAACGAAGTCGTATAAGCGAATC
TTACCAAATTCGGTATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIIKYIQNMLFQSLNLYSILVAGLTATFIVFMRQLSYYKQQIINKDLKIIPAYFDKKMLYKILNNNCDRYSALEMIKSYF
KLKTARSLSYEELENDKQLSELFRDSLNYFIDDFISKSDKSVTVNKVFSIQDEHNNTHKSYAFLEKNKISDKTHQMLIYV
KVHYIMTKDDEESLNTFIHLAKIM

Sequences:

>Translated_184_residues
MIIKYIQNMLFQSLNLYSILVAGLTATFIVFMRQLSYYKQQIINKDLKIIPAYFDKKMLYKILNNNCDRYSALEMIKSYF
KLKTARSLSYEELENDKQLSELFRDSLNYFIDDFISKSDKSVTVNKVFSIQDEHNNTHKSYAFLEKNKISDKTHQMLIYV
KVHYIMTKDDEESLNTFIHLAKIM
>Mature_184_residues
MIIKYIQNMLFQSLNLYSILVAGLTATFIVFMRQLSYYKQQIINKDLKIIPAYFDKKMLYKILNNNCDRYSALEMIKSYF
KLKTARSLSYEELENDKQLSELFRDSLNYFIDDFISKSDKSVTVNKVFSIQDEHNNTHKSYAFLEKNKISDKTHQMLIYV
KVHYIMTKDDEESLNTFIHLAKIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21926; Mature: 21926

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKYIQNMLFQSLNLYSILVAGLTATFIVFMRQLSYYKQQIINKDLKIIPAYFDKKMLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH
KILNNNCDRYSALEMIKSYFKLKTARSLSYEELENDKQLSELFRDSLNYFIDDFISKSDK
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC
SVTVNKVFSIQDEHNNTHKSYAFLEKNKISDKTHQMLIYVKVHYIMTKDDEESLNTFIHL
CEEHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHH
AKIM
HHCC
>Mature Secondary Structure
MIIKYIQNMLFQSLNLYSILVAGLTATFIVFMRQLSYYKQQIINKDLKIIPAYFDKKMLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH
KILNNNCDRYSALEMIKSYFKLKTARSLSYEELENDKQLSELFRDSLNYFIDDFISKSDK
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC
SVTVNKVFSIQDEHNNTHKSYAFLEKNKISDKTHQMLIYVKVHYIMTKDDEESLNTFIHL
CEEHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHH
AKIM
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA