| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586967
Identifier: 229586967
GI number: 229586967
Start: 909327
End: 909575
Strand: Direct
Name: 229586967
Synonym: RAF_ORF0864
Alternate gene names: NA
Gene position: 909327-909575 (Clockwise)
Preceding gene: 229586964
Following gene: 229586968
Centisome position: 71.12
GC content: 29.72
Gene sequence:
>249_bases ATGTCATCTACCAACTATATCAAAGAAGCACCGAAAAAAGCCAAATCACCGGCTAAATTTGATAATTTATCAACTGCCTT AAAAAAGAATTTACAAAGAAGAAAGAAAGTTAAAACAAAAGATACTACAAGCCAAGCTTTATCTGCATTACAAACAATAG TCAAAAATTACACTGATTCTACGGACGAAAACATTTCTCTTGTAGATGAATTAATAAAATCAAGATGCTCAGAAACAGAA AGTAAATAA
Upstream 100 bases:
>100_bases GAGAGATTATATTACTTTGATTCATAGATTATTTATAGTTTTATTTTCCAAAATATCCATAATATAATATAATAATGCTA ATGTGAAAAGATAATTATTT
Downstream 100 bases:
>100_bases GCACCACATTTGACATATTAATATAAATTGTTAATATTTGGGGAGTTTAGGTTTTGTTGCATAGCTCGCTTATGTCATTC CCGCATAGGCGGGAATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSSTNYIKEAPKKAKSPAKFDNLSTALKKNLQRRKKVKTKDTTSQALSALQTIVKNYTDSTDENISLVDELIKSRCSETE SK
Sequences:
>Translated_82_residues MSSTNYIKEAPKKAKSPAKFDNLSTALKKNLQRRKKVKTKDTTSQALSALQTIVKNYTDSTDENISLVDELIKSRCSETE SK >Mature_81_residues SSTNYIKEAPKKAKSPAKFDNLSTALKKNLQRRKKVKTKDTTSQALSALQTIVKNYTDSTDENISLVDELIKSRCSETES K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9196; Mature: 9064
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTNYIKEAPKKAKSPAKFDNLSTALKKNLQRRKKVKTKDTTSQALSALQTIVKNYTDS CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC TDENISLVDELIKSRCSETESK CCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSTNYIKEAPKKAKSPAKFDNLSTALKKNLQRRKKVKTKDTTSQALSALQTIVKNYTDS CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC TDENISLVDELIKSRCSETESK CCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA