Click here to switch to the map view.

The map label for this gene is yajC [C]

Identifier: 229586923

GI number: 229586923

Start: 848009

End: 848623

Strand: Direct

Name: yajC [C]

Synonym: RAF_ORF0809

Alternate gene names: 229586923

Gene position: 848009-848623 (Clockwise)

Preceding gene: 229586921

Following gene: 229586924

Centisome position: 66.33

GC content: 33.01

Gene sequence:

>615_bases
ATGTATACCGCAAATACTTCAAAAGTTGGAAGCCAAATAAGTGGTGAGCCTGTGGAGCGTAGCAAACTACATGAGCAAAG
GCGAAACCTAAAATTTGACGTACCAAAGCTTGAAGTATCAAAGGTATACAAATTACTTTTAGAAAGAGGTTATACAGGAA
GACTATTGCAACAATTAGGAAATATACATATGTCAGCAAATACGCAAGATAATCAGGCAAATAATAACGACACTATAGAA
ATACAGGAAACTGAGGTAGTGCCTTCAGAAACAAATTCTTTACAATCGGGGTTAACAAGCTTAATACCGATGGTTTTAAT
TTTTGCTGTATTTTACTTCTTATTATTACGTCCACAAGAAACACGACGCAAAGAAAGAGAGAAATTAGTAAGTGAAGTTA
AAAAAGGCGAAGAAGTTCTAACAAATAGCGGCATTTATGGTATTGTGACTAAAGTAAGTGAAAATGACAATAATATTGAA
ATCGAAATAGCTAAAGATGTACGTATTAAAGTTTTAAAAAGTGCTATTATCGATATAACGAGTCGTACAAAAGAAGTAGC
AGTAAAAAAAGAAAACAAAAAAAATAAGAAGGTAAGCGGTGCAAAAGCTTCCTAA

Upstream 100 bases:

>100_bases
TAGCTATTTTTATTTTATTAAACTTAGTGCATAACCTATCTTATAAAGAGAAATTTTAAGGAAACACAGCAAAGGGACGT
GAGATGCGAGTACCGGATTG

Downstream 100 bases:

>100_bases
GTGGAAAATTTTTCTTTCAATTATATGTACGGTTTTTGCGGTTATTTGTGCCTTACCTAATGTCATGCAGGTAAACTCTA
AGTTTCTACCTCATGATTCA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MYTANTSKVGSQISGEPVERSKLHEQRRNLKFDVPKLEVSKVYKLLLERGYTGRLLQQLGNIHMSANTQDNQANNNDTIE
IQETEVVPSETNSLQSGLTSLIPMVLIFAVFYFLLLRPQETRRKEREKLVSEVKKGEEVLTNSGIYGIVTKVSENDNNIE
IEIAKDVRIKVLKSAIIDITSRTKEVAVKKENKKNKKVSGAKAS

Sequences:

>Translated_204_residues
MYTANTSKVGSQISGEPVERSKLHEQRRNLKFDVPKLEVSKVYKLLLERGYTGRLLQQLGNIHMSANTQDNQANNNDTIE
IQETEVVPSETNSLQSGLTSLIPMVLIFAVFYFLLLRPQETRRKEREKLVSEVKKGEEVLTNSGIYGIVTKVSENDNNIE
IEIAKDVRIKVLKSAIIDITSRTKEVAVKKENKKNKKVSGAKAS
>Mature_204_residues
MYTANTSKVGSQISGEPVERSKLHEQRRNLKFDVPKLEVSKVYKLLLERGYTGRLLQQLGNIHMSANTQDNQANNNDTIE
IQETEVVPSETNSLQSGLTSLIPMVLIFAVFYFLLLRPQETRRKEREKLVSEVKKGEEVLTNSGIYGIVTKVSENDNNIE
IEIAKDVRIKVLKSAIIDITSRTKEVAVKKENKKNKKVSGAKAS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=97, Percent_Identity=40.2061855670103, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 22988; Mature: 22988

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTANTSKVGSQISGEPVERSKLHEQRRNLKFDVPKLEVSKVYKLLLERGYTGRLLQQLG
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC
NIHMSANTQDNQANNNDTIEIQETEVVPSETNSLQSGLTSLIPMVLIFAVFYFLLLRPQE
CEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TRRKEREKLVSEVKKGEEVLTNSGIYGIVTKVSENDNNIEIEIAKDVRIKVLKSAIIDIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHH
SRTKEVAVKKENKKNKKVSGAKAS
HHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MYTANTSKVGSQISGEPVERSKLHEQRRNLKFDVPKLEVSKVYKLLLERGYTGRLLQQLG
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC
NIHMSANTQDNQANNNDTIEIQETEVVPSETNSLQSGLTSLIPMVLIFAVFYFLLLRPQE
CEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TRRKEREKLVSEVKKGEEVLTNSGIYGIVTKVSENDNNIEIEIAKDVRIKVLKSAIIDIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHH
SRTKEVAVKKENKKNKKVSGAKAS
HHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]