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The map label for this gene is rpmJ

Identifier: 229586848

GI number: 229586848

Start: 748337

End: 748462

Strand: Direct

Name: rpmJ

Synonym: RAF_ORF0716

Alternate gene names: 229586848

Gene position: 748337-748462 (Clockwise)

Preceding gene: 229586838

Following gene: 229586849

Centisome position: 58.53

GC content: 23.81

Gene sequence:

>126_bases
ATGAAAGTTGTTAGCTCATTAAAATCGTTAAAAAAACGTGATAAAGATTGTCAGATCGTTAAAAGAAGAGGCAAAATTTT
TGTAATAAATAAAAAGAATAAAAGATTTAAAGCAAAACAAGGTTAA

Upstream 100 bases:

>100_bases
CCATAATTATGATTATTCTATTACAAGAGTACAGAACCTAATTGACTGATTAAATAAAAATGTTTATTATCAATCCAAAT
TAAATGTAAAAGTATATTTT

Downstream 100 bases:

>100_bases
TTAATCGTTTTTGGAGAAAAAAAATATACTCGATGAACTTGAAAAATTAGCTACGTCGTCTTTATAAGTCCTCGGATGCT
GAGTGTTTATTATATGCTCC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVVSSLKSLKKRDKDCQIVKRRGKIFVINKKNKRFKAKQG

Sequences:

>Translated_41_residues
MKVVSSLKSLKKRDKDCQIVKRRGKIFVINKKNKRFKAKQG
>Mature_41_residues
MKVVSSLKSLKKRDKDCQIVKRRGKIFVINKKNKRFKAKQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_RICAE (C3PNU6)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845349.1
- ProteinModelPortal:   C3PNU6
- SMR:   C3PNU6
- GeneID:   7815692
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF0716
- ProtClustDB:   PRK00831
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4833; Mature: 4833

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVSSLKSLKKRDKDCQIVKRRGKIFVINKKNKRFKAKQG
CCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKVVSSLKSLKKRDKDCQIVKRRGKIFVINKKNKRFKAKQG
CCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA